RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 TUBB2BQ9BVA1 445 aa11.88□□□□□ -0.51
MSH5-216ENST00000484309 PITPNM3Q9BZ71 974 aa11.88□□□□□ -0.51
MSH5-216ENST00000484309 AKIRIN1Q9H9L7 192 aaPredicted RBP11.88□□□□□ -0.51
MSH5-216ENST00000484309 C20orf96Q9NUD7 363 aaPredicted RBP11.88□□□□□ -0.51
MSH5-216ENST00000484309 PCYOX1Q9UHG3 505 aa11.88□□□□□ -0.51
MSH5-216ENST00000484309 KLHL20Q9Y2M5 609 aa11.88□□□□□ -0.51
MSH5-216ENST00000484309 FASNP49327 2511 aaKnown RBP11.88□□□□□ -0.51
MSH5-216ENST00000484309 MAGEB16A2A368 324 aa11.87□□□□□ -0.51
MSH5-216ENST00000484309 PFDN6O15212 129 aa11.87□□□□□ -0.51
MSH5-216ENST00000484309 TTI1O43156 1089 aa11.87□□□□□ -0.51
MSH5-216ENST00000484309 KATNA1O75449 491 aa11.87□□□□□ -0.51
MSH5-216ENST00000484309 USP1O94782 785 aa11.87□□□□□ -0.51
MSH5-216ENST00000484309 SLCO2B1O94956 709 aa11.87□□□□□ -0.51
MSH5-216ENST00000484309 S1PR4O95977 384 aa11.87□□□□□ -0.51
MSH5-216ENST00000484309 FAM87AP0C7U9 286 aa11.87□□□□□ -0.51
MSH5-216ENST00000484309 CCNYL3P0C7X3 344 aa11.87□□□□□ -0.51
MSH5-216ENST00000484309 ATXN8OSP0DMR3 200 aa11.87□□□□□ -0.51
MSH5-216ENST00000484309 PKMP14618 531 aaKnown RBP11.87□□□□□ -0.51
MSH5-216ENST00000484309 CHRM3P20309 590 aa11.87□□□□□ -0.51
MSH5-216ENST00000484309 OAS2P29728 719 aaKnown RBP11.87□□□□□ -0.51
MSH5-216ENST00000484309 RAB28P51157 221 aa11.87□□□□□ -0.51
MSH5-216ENST00000484309 MRPS25P82663 173 aaKnown RBP11.87□□□□□ -0.51
MSH5-216ENST00000484309 DR1Q01658 176 aa11.87□□□□□ -0.51
MSH5-216ENST00000484309 MAP7Q14244 749 aa11.87□□□□□ -0.51
MSH5-216ENST00000484309 ZIC1Q15915 447 aa11.87□□□□□ -0.51
MSH5-216ENST00000484309 KYNUQ16719 465 aa11.87□□□□□ -0.51
MSH5-216ENST00000484309 LONRF1Q17RB8 773 aa11.87□□□□□ -0.51
MSH5-216ENST00000484309 BBS9Q3SYG4 887 aa11.87□□□□□ -0.51
MSH5-216ENST00000484309 UNC5DQ6UXZ4 953 aa11.87□□□□□ -0.51
MSH5-216ENST00000484309 CDHR3Q6ZTQ4 885 aa11.87□□□□□ -0.51
MSH5-216ENST00000484309 DCUN1D3Q8IWE4 304 aa11.87□□□□□ -0.51
MSH5-216ENST00000484309 CARFQ8N187 725 aa11.87□□□□□ -0.51
MSH5-216ENST00000484309 EXD3Q8N9H8 876 aa11.87□□□□□ -0.51
MSH5-216ENST00000484309 C19orf47Q8N9M1 422 aaKnown RBP11.87□□□□□ -0.51
MSH5-216ENST00000484309 LINC01555Q8NAE3 123 aa11.87□□□□□ -0.51
MSH5-216ENST00000484309 FLVCR1-AS1Q8TAF5 88 aa11.87□□□□□ -0.51
MSH5-216ENST00000484309 SLCO2A1Q92959 643 aa11.87□□□□□ -0.51
MSH5-216ENST00000484309 SLC45A3Q96JT2 553 aa11.87□□□□□ -0.51
MSH5-216ENST00000484309 TCF12Q99081 682 aa11.87□□□□□ -0.51
MSH5-216ENST00000484309 TRIM31Q9BZY9 425 aa11.87□□□□□ -0.51
MSH5-216ENST00000484309 FANCEQ9HB96 536 aa11.87□□□□□ -0.51
MSH5-216ENST00000484309 FAM60AQ9NP50 221 aa11.87□□□□□ -0.51
MSH5-216ENST00000484309 LHX9Q9NQ69 397 aa11.87□□□□□ -0.51
MSH5-216ENST00000484309 KCND1Q9NSA2 647 aa11.87□□□□□ -0.51
MSH5-216ENST00000484309 IARS2Q9NSE4 1012 aaKnown RBP11.87□□□□□ -0.51
MSH5-216ENST00000484309 CFAP46Q8IYW2 2715 aa11.86□□□□□ -0.51
MSH5-216ENST00000484309 A0A0J9YY10 115 aa11.86□□□□□ -0.51
MSH5-216ENST00000484309 E5RI56 91 aa11.86□□□□□ -0.51
MSH5-216ENST00000484309 KPNA5O15131 536 aa11.86□□□□□ -0.51
MSH5-216ENST00000484309 HCRTR1O43613 425 aa11.86□□□□□ -0.51
MSH5-216ENST00000484309 KDM1AO60341 852 aa11.86□□□□□ -0.51
MSH5-216ENST00000484309 CPNE3O75131 537 aaKnown RBP11.86□□□□□ -0.51
MSH5-216ENST00000484309 ESR1P03372 595 aa11.86□□□□□ -0.51
MSH5-216ENST00000484309 RPN2P04844 631 aa11.86□□□□□ -0.51
MSH5-216ENST00000484309 PGAM1P18669 254 aa11.86□□□□□ -0.51
MSH5-216ENST00000484309 TCN2P20062 427 aa11.86□□□□□ -0.51
MSH5-216ENST00000484309 IVDP26440 423 aa11.86□□□□□ -0.51
MSH5-216ENST00000484309 PAFAH1B1P43034 410 aa11.86□□□□□ -0.51
MSH5-216ENST00000484309 RPS18P62269 152 aaKnown RBP11.86□□□□□ -0.51
MSH5-216ENST00000484309 CDC20Q12834 499 aa11.86□□□□□ -0.51
MSH5-216ENST00000484309 GPS2Q13227 327 aa11.86□□□□□ -0.51
MSH5-216ENST00000484309 DNASE1L3Q13609 305 aa11.86□□□□□ -0.51
MSH5-216ENST00000484309 CUL1Q13616 776 aa11.86□□□□□ -0.51
MSH5-216ENST00000484309 CRYMQ14894 314 aa11.86□□□□□ -0.51
MSH5-216ENST00000484309 HSP90AA5PQ58FG0 334 aa11.86□□□□□ -0.51
MSH5-216ENST00000484309 ACSBG2Q5FVE4 666 aa11.86□□□□□ -0.51
MSH5-216ENST00000484309 PLEKHS1Q5SXH7 462 aa11.86□□□□□ -0.51
MSH5-216ENST00000484309 ZNF549Q6P9A3 640 aa11.86□□□□□ -0.51
MSH5-216ENST00000484309 KCNMB4Q86W47 210 aa11.86□□□□□ -0.51
MSH5-216ENST00000484309 IGDCC3Q8IVU1 814 aa11.86□□□□□ -0.51
MSH5-216ENST00000484309 ZBTB2Q8N680 514 aa11.86□□□□□ -0.51
MSH5-216ENST00000484309 SLC38A9Q8NBW4 561 aa11.86□□□□□ -0.51
MSH5-216ENST00000484309 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.86□□□□□ -0.51
MSH5-216ENST00000484309 LSM14AQ8ND56 463 aaKnown RBP11.86□□□□□ -0.51
MSH5-216ENST00000484309 MR1Q95460 341 aa11.86□□□□□ -0.51
MSH5-216ENST00000484309 CFAP36Q96G28 342 aa11.86□□□□□ -0.51
MSH5-216ENST00000484309 KRT12Q99456 494 aa11.86□□□□□ -0.51
MSH5-216ENST00000484309 SLC30A3Q99726 388 aa11.86□□□□□ -0.51
MSH5-216ENST00000484309 MENTQ9BUN1 341 aa11.86□□□□□ -0.51
MSH5-216ENST00000484309 INTS10Q9NVR2 710 aaKnown RBP11.86□□□□□ -0.51
MSH5-216ENST00000484309 OR6C2Q9NZP2 312 aa11.86□□□□□ -0.51
MSH5-216ENST00000484309 SLC17A6Q9P2U8 582 aa11.86□□□□□ -0.51
MSH5-216ENST00000484309 PADI1Q9ULC6 663 aa11.86□□□□□ -0.51
MSH5-216ENST00000484309 SLC39A10Q9ULF5 831 aa11.86□□□□□ -0.51
MSH5-216ENST00000484309 TNRC6AQ8NDV7 1962 aaKnown RBP11.86□□□□□ -0.51
MSH5-216ENST00000484309 MED13Q9UHV7 2174 aa11.85□□□□□ -0.51
MSH5-216ENST00000484309 TLN1Q9Y490 2541 aaKnown RBP11.85□□□□□ -0.51
MSH5-216ENST00000484309 H3BMM5 538 aa11.85□□□□□ -0.51
MSH5-216ENST00000484309 TK2O00142 265 aa11.85□□□□□ -0.51
MSH5-216ENST00000484309 TERTO14746 1132 aaKnown RBP11.85□□□□□ -0.51
MSH5-216ENST00000484309 RASGRF2O14827 1237 aa11.85□□□□□ -0.51
MSH5-216ENST00000484309 MAP3K7O43318 606 aa11.85□□□□□ -0.51
MSH5-216ENST00000484309 KALRNO60229 2985 aa11.85□□□□□ -0.51
MSH5-216ENST00000484309 C1orf105O95561 183 aa11.85□□□□□ -0.51
MSH5-216ENST00000484309 MT-ND3P03897 115 aa11.85□□□□□ -0.51
MSH5-216ENST00000484309 ITGB2P05107 769 aa11.85□□□□□ -0.51
MSH5-216ENST00000484309 CTSBP07858 339 aa11.85□□□□□ -0.51
MSH5-216ENST00000484309 ERVK-10P10266 1014 aa11.85□□□□□ -0.51
MSH5-216ENST00000484309 CYP2A7P20853 494 aa11.85□□□□□ -0.51
MSH5-216ENST00000484309 MAGP20916 626 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms