RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 DHRS7Q9Y394 339 aa17.43■□□□□ 0.38
HDAC6-225ENST00000483506 NFS1Q9Y697 457 aa17.43■□□□□ 0.38
HDAC6-225ENST00000483506 EIF3FO00303 357 aaPredicted RBP17.42■□□□□ 0.38
HDAC6-225ENST00000483506 RASGRF2O14827 1237 aa17.42■□□□□ 0.38
HDAC6-225ENST00000483506 DLGAP3O95886 979 aa17.42■□□□□ 0.38
HDAC6-225ENST00000483506 AHSGP02765 367 aa17.42■□□□□ 0.38
HDAC6-225ENST00000483506 ENO3P13929 434 aaPredicted RBP17.42■□□□□ 0.38
HDAC6-225ENST00000483506 FOLR1P15328 257 aa17.42■□□□□ 0.38
HDAC6-225ENST00000483506 CDH3P22223 829 aa17.42■□□□□ 0.38
HDAC6-225ENST00000483506 PEBP1P30086 187 aaKnown RBP17.42■□□□□ 0.38
HDAC6-225ENST00000483506 CARSP49589 748 aaKnown RBP17.42■□□□□ 0.38
HDAC6-225ENST00000483506 TMPRSS3P57727 454 aa17.42■□□□□ 0.38
HDAC6-225ENST00000483506 TIAL1Q01085 375 aaKnown RBP eCLIP17.42■□□□□ 0.38
HDAC6-225ENST00000483506 ACY1Q03154 408 aa17.42■□□□□ 0.38
HDAC6-225ENST00000483506 FOXM1Q08050 763 aa17.42■□□□□ 0.38
HDAC6-225ENST00000483506 MAP7Q14244 749 aa17.42■□□□□ 0.38
HDAC6-225ENST00000483506 TGIF1Q15583 401 aa17.42■□□□□ 0.38
HDAC6-225ENST00000483506 ACSBG2Q5FVE4 666 aa17.42■□□□□ 0.38
HDAC6-225ENST00000483506 RASGRP3Q8IV61 690 aa17.42■□□□□ 0.38
HDAC6-225ENST00000483506 LINC01555Q8NAE3 123 aa17.42■□□□□ 0.38
HDAC6-225ENST00000483506 OR2L8Q8NGY9 312 aa17.42■□□□□ 0.38
HDAC6-225ENST00000483506 CFAP61Q8NHU2 1237 aa17.42■□□□□ 0.38
HDAC6-225ENST00000483506 HMGCLL1Q8TB92 370 aa17.42■□□□□ 0.38
HDAC6-225ENST00000483506 CD200R1Q8TD46 325 aa17.42■□□□□ 0.38
HDAC6-225ENST00000483506 INPP5DQ92835 1189 aa17.42■□□□□ 0.38
HDAC6-225ENST00000483506 NKD1Q969G9 470 aa17.42■□□□□ 0.38
HDAC6-225ENST00000483506 RAD51AP1Q96B01 352 aa17.42■□□□□ 0.38
HDAC6-225ENST00000483506 TRIM44Q96DX7 344 aaPredicted RBP17.42■□□□□ 0.38
HDAC6-225ENST00000483506 FOPNLQ96NB1 174 aa17.42■□□□□ 0.38
HDAC6-225ENST00000483506 OR2A14Q96R47 310 aa17.42■□□□□ 0.38
HDAC6-225ENST00000483506 SPHK1Q9NYA1 384 aa17.42■□□□□ 0.38
HDAC6-225ENST00000483506 CORO1CQ9ULV4 474 aaPredicted RBP17.42■□□□□ 0.38
HDAC6-225ENST00000483506 PLAGL1Q9UM63 463 aa17.42■□□□□ 0.38
HDAC6-225ENST00000483506 SNRNP200O75643 2136 aaKnown RBP17.41■□□□□ 0.38
HDAC6-225ENST00000483506 PSIP1O75475 530 aaKnown RBP17.41■□□□□ 0.38
HDAC6-225ENST00000483506 EBLN1P0CF75 366 aa17.41■□□□□ 0.38
HDAC6-225ENST00000483506 MPC1LP0DKB6 136 aa17.41■□□□□ 0.38
HDAC6-225ENST00000483506 CBSLP0DN79 551 aa17.41■□□□□ 0.38
HDAC6-225ENST00000483506 UGT2B7P16662 529 aa17.41■□□□□ 0.38
HDAC6-225ENST00000483506 CBSP35520 551 aa17.41■□□□□ 0.38
HDAC6-225ENST00000483506 TUBB4BP68371 445 aa17.41■□□□□ 0.38
HDAC6-225ENST00000483506 TUBB3Q13509 450 aa17.41■□□□□ 0.38
HDAC6-225ENST00000483506 KCNAB1Q14722 419 aa17.41■□□□□ 0.38
HDAC6-225ENST00000483506 SLC5A12Q1EHB4 618 aa17.41■□□□□ 0.38
HDAC6-225ENST00000483506 FBXO38Q6PIJ6 1188 aa17.41■□□□□ 0.38
HDAC6-225ENST00000483506 ANKMY2Q8IV38 441 aa17.41■□□□□ 0.38
HDAC6-225ENST00000483506 ZBED8Q8IZ13 594 aa17.41■□□□□ 0.38
HDAC6-225ENST00000483506 FBXO15Q8NCQ5 510 aaPredicted RBP17.41■□□□□ 0.38
HDAC6-225ENST00000483506 OR8K5Q8NH50 307 aa17.41■□□□□ 0.38
HDAC6-225ENST00000483506 MAGEC3Q8TD91 643 aa17.41■□□□□ 0.38
HDAC6-225ENST00000483506 CRELD1Q96HD1 420 aa17.41■□□□□ 0.38
HDAC6-225ENST00000483506 TRAPPC9Q96Q05 1148 aa17.41■□□□□ 0.38
HDAC6-225ENST00000483506 CCNL2Q96S94 520 aaPredicted RBP17.41■□□□□ 0.38
HDAC6-225ENST00000483506 GPR21Q99679 349 aa17.41■□□□□ 0.38
HDAC6-225ENST00000483506 SYTL2Q9HCH5 934 aa17.41■□□□□ 0.38
HDAC6-225ENST00000483506 PDE7BQ9NP56 450 aa17.41■□□□□ 0.38
HDAC6-225ENST00000483506 RARRES3Q9UL19 164 aa17.41■□□□□ 0.38
HDAC6-225ENST00000483506 LHX6Q9UPM6 363 aa17.41■□□□□ 0.38
HDAC6-225ENST00000483506 RUVBL2Q9Y230 463 aaKnown RBP17.41■□□□□ 0.38
HDAC6-225ENST00000483506 MGAQ8IWI9 3026 aa17.4■□□□□ 0.38
HDAC6-225ENST00000483506 SLC9B1P1A6NJY1 282 aa17.4■□□□□ 0.38
HDAC6-225ENST00000483506 RAD1O60671 282 aa17.4■□□□□ 0.38
HDAC6-225ENST00000483506 VPS26AO75436 327 aa17.4■□□□□ 0.38
HDAC6-225ENST00000483506 STK17BO94768 372 aa17.4■□□□□ 0.38
HDAC6-225ENST00000483506 ERGP11308 486 aa17.4■□□□□ 0.38
HDAC6-225ENST00000483506 ST6GAL1P15907 406 aa17.4■□□□□ 0.38
HDAC6-225ENST00000483506 SKIV2L2P42285 1042 aaKnown RBP17.4■□□□□ 0.38
HDAC6-225ENST00000483506 BDKRB1P46663 353 aa17.4■□□□□ 0.38
HDAC6-225ENST00000483506 ARL4DP49703 201 aa17.4■□□□□ 0.38
HDAC6-225ENST00000483506 ATP1A2P50993 1020 aa17.4■□□□□ 0.38
HDAC6-225ENST00000483506 MGAT5Q09328 741 aa17.4■□□□□ 0.38
HDAC6-225ENST00000483506 KLHL38Q2WGJ6 581 aa17.4■□□□□ 0.38
HDAC6-225ENST00000483506 TMTC4Q5T4D3 741 aa17.4■□□□□ 0.38
HDAC6-225ENST00000483506 UGT3A1Q6NUS8 523 aa17.4■□□□□ 0.38
HDAC6-225ENST00000483506 C8orf74Q6P047 294 aa17.4■□□□□ 0.38
HDAC6-225ENST00000483506 TTC23LQ6PF05 361 aa17.4■□□□□ 0.38
HDAC6-225ENST00000483506 ZDHHC24Q6UX98 284 aa17.4■□□□□ 0.38
HDAC6-225ENST00000483506 CYS1Q717R9 158 aa17.4■□□□□ 0.38
HDAC6-225ENST00000483506 PPP1R3BQ86XI6 285 aa17.4■□□□□ 0.38
HDAC6-225ENST00000483506 MMGT1Q8N4V1 131 aa17.4■□□□□ 0.38
HDAC6-225ENST00000483506 DENND1AQ8TEH3 1009 aa17.4■□□□□ 0.38
HDAC6-225ENST00000483506 SKA2Q8WVK7 121 aaPredicted RBP17.4■□□□□ 0.38
HDAC6-225ENST00000483506 ZNF592Q92610 1267 aa17.4■□□□□ 0.38
HDAC6-225ENST00000483506 PPANQ9NQ55 473 aaKnown RBP17.4■□□□□ 0.38
HDAC6-225ENST00000483506 FGF21Q9NSA1 209 aa17.4■□□□□ 0.38
HDAC6-225ENST00000483506 SPATA7Q9P0W8 599 aa17.4■□□□□ 0.38
HDAC6-225ENST00000483506 SLC17A6Q9P2U8 582 aa17.4■□□□□ 0.38
HDAC6-225ENST00000483506 LOC400499M0QZD8 3231 aa17.4■□□□□ 0.38
HDAC6-225ENST00000483506 IGSF10Q6WRI0 2623 aa17.39■□□□□ 0.37
HDAC6-225ENST00000483506 A0A0J9YY10 115 aa17.39■□□□□ 0.37
HDAC6-225ENST00000483506 ARHGEF33A8MVX0 844 aa17.39■□□□□ 0.37
HDAC6-225ENST00000483506 K7ENP7 123 aa17.39■□□□□ 0.37
HDAC6-225ENST00000483506 MYO1CO00159 1063 aa17.39■□□□□ 0.37
HDAC6-225ENST00000483506 EFSO43281 561 aa17.39■□□□□ 0.37
HDAC6-225ENST00000483506 PRICKLE3O43900 615 aaPredicted RBP17.39■□□□□ 0.37
HDAC6-225ENST00000483506 SPAG6O75602 509 aa17.39■□□□□ 0.37
HDAC6-225ENST00000483506 FKBP9O95302 570 aa17.39■□□□□ 0.37
HDAC6-225ENST00000483506 MAP4P27816 1152 aaKnown RBP17.39■□□□□ 0.37
HDAC6-225ENST00000483506 PLTPP55058 493 aa17.39■□□□□ 0.37
HDAC6-225ENST00000483506 TRADDQ15628 312 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms