RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 PACSIN3Q9UKS6 424 aa11.63□□□□□ -0.55
SND1-210ENST00000483503 CNOT6Q9ULM6 557 aaKnown RBP11.63□□□□□ -0.55
SND1-210ENST00000483503 POLR3HQ9Y535 204 aaPredicted RBP11.63□□□□□ -0.55
SND1-210ENST00000483503 CUL9Q8IWT3 2517 aa11.63□□□□□ -0.55
SND1-210ENST00000483503 KANSL1LA0AUZ9 987 aa11.62□□□□□ -0.55
SND1-210ENST00000483503 KLHL33A6NCF5 533 aa11.62□□□□□ -0.55
SND1-210ENST00000483503 PRORSD1PA6NEY8 169 aa11.62□□□□□ -0.55
SND1-210ENST00000483503 AQP12BA6NM10 295 aa11.62□□□□□ -0.55
SND1-210ENST00000483503 ARHGEF33A8MVX0 844 aa11.62□□□□□ -0.55
SND1-210ENST00000483503 H3BM21 787 aa11.62□□□□□ -0.55
SND1-210ENST00000483503 INPP4BO15327 924 aa11.62□□□□□ -0.55
SND1-210ENST00000483503 IL6P05231 212 aa11.62□□□□□ -0.55
SND1-210ENST00000483503 G6PDP11413 515 aa11.62□□□□□ -0.55
SND1-210ENST00000483503 HSD3B1P14060 373 aa11.62□□□□□ -0.55
SND1-210ENST00000483503 JUPP14923 745 aa11.62□□□□□ -0.55
SND1-210ENST00000483503 TCN1P20061 433 aaPredicted RBP11.62□□□□□ -0.55
SND1-210ENST00000483503 HSD3B2P26439 372 aa11.62□□□□□ -0.55
SND1-210ENST00000483503 VARSP26640 1264 aaKnown RBP11.62□□□□□ -0.55
SND1-210ENST00000483503 GDI1P31150 447 aa11.62□□□□□ -0.55
SND1-210ENST00000483503 P2RY2P41231 377 aa11.62□□□□□ -0.55
SND1-210ENST00000483503 HNF4AP41235 474 aa11.62□□□□□ -0.55
SND1-210ENST00000483503 ERFP50548 548 aa11.62□□□□□ -0.55
SND1-210ENST00000483503 CTSCP53634 463 aa11.62□□□□□ -0.55
SND1-210ENST00000483503 RPL38P63173 70 aaKnown RBP11.62□□□□□ -0.55
SND1-210ENST00000483503 IRF8Q02556 426 aa11.62□□□□□ -0.55
SND1-210ENST00000483503 MESP2Q0VG99 397 aa11.62□□□□□ -0.55
SND1-210ENST00000483503 ABRQ12979 859 aa11.62□□□□□ -0.55
SND1-210ENST00000483503 CSTF3Q12996 717 aaKnown RBP11.62□□□□□ -0.55
SND1-210ENST00000483503 ADGRE1Q14246 886 aa11.62□□□□□ -0.55
SND1-210ENST00000483503 GRM2Q14416 872 aa11.62□□□□□ -0.55
SND1-210ENST00000483503 INPP5AQ14642 412 aa11.62□□□□□ -0.55
SND1-210ENST00000483503 TLR1Q15399 786 aa11.62□□□□□ -0.55
SND1-210ENST00000483503 TRIP10Q15642 601 aa11.62□□□□□ -0.55
SND1-210ENST00000483503 C10orf62Q5T681 223 aaPredicted RBP11.62□□□□□ -0.55
SND1-210ENST00000483503 OGFRL1Q5TC84 451 aaPredicted RBP11.62□□□□□ -0.55
SND1-210ENST00000483503 IZUMO2Q6UXV1 221 aa11.62□□□□□ -0.55
SND1-210ENST00000483503 HID1Q8IV36 788 aa11.62□□□□□ -0.55
SND1-210ENST00000483503 MMAAQ8IVH4 418 aaKnown RBP11.62□□□□□ -0.55
SND1-210ENST00000483503 AQP12AQ8IXF9 295 aa11.62□□□□□ -0.55
SND1-210ENST00000483503 SLC15A3Q8IY34 581 aa11.62□□□□□ -0.55
SND1-210ENST00000483503 RGL4Q8IZJ4 473 aa11.62□□□□□ -0.55
SND1-210ENST00000483503 BEND7Q8N7W2 519 aaPredicted RBP11.62□□□□□ -0.55
SND1-210ENST00000483503 ADCY4Q8NFM4 1077 aa11.62□□□□□ -0.55
SND1-210ENST00000483503 HM13Q8TCT9 377 aa11.62□□□□□ -0.55
SND1-210ENST00000483503 HIC2Q96JB3 615 aa11.62□□□□□ -0.55
SND1-210ENST00000483503 TRMT61BQ9BVS5 477 aaKnown RBP11.62□□□□□ -0.55
SND1-210ENST00000483503 OR2AG1Q9H205 316 aa11.62□□□□□ -0.55
SND1-210ENST00000483503 FBRSQ9HAH7 460 aa11.62□□□□□ -0.55
SND1-210ENST00000483503 IL1RL2Q9HB29 575 aa11.62□□□□□ -0.55
SND1-210ENST00000483503 MBD1Q9UIS9 605 aaPredicted RBP11.62□□□□□ -0.55
SND1-210ENST00000483503 MAPRE3Q9UPY8 281 aa11.62□□□□□ -0.55
SND1-210ENST00000483503 COQ6Q9Y2Z9 468 aa11.62□□□□□ -0.55
SND1-210ENST00000483503 AP4S1Q9Y587 144 aa11.62□□□□□ -0.55
SND1-210ENST00000483503 PCDHA9Q9Y5H5 950 aa11.62□□□□□ -0.55
SND1-210ENST00000483503 FADS3Q9Y5Q0 445 aa11.62□□□□□ -0.55
SND1-210ENST00000483503 DNMT3AQ9Y6K1 912 aaPredicted RBP11.62□□□□□ -0.55
SND1-210ENST00000483503 DENND4AQ7Z401 1863 aa11.61□□□□□ -0.55
SND1-210ENST00000483503 KCNE1BA0A087WTH5 132 aa11.61□□□□□ -0.55
SND1-210ENST00000483503 PRSS51A0A1B0GVH4 220 aa11.61□□□□□ -0.55
SND1-210ENST00000483503 TCRBV3S1A0A5B6 114 aa11.61□□□□□ -0.55
SND1-210ENST00000483503 FXYD1O00168 92 aa11.61□□□□□ -0.55
SND1-210ENST00000483503 NME4O00746 187 aa11.61□□□□□ -0.55
SND1-210ENST00000483503 SOD1P00441 154 aa11.61□□□□□ -0.55
SND1-210ENST00000483503 PDYNP01213 254 aa11.61□□□□□ -0.55
SND1-210ENST00000483503 LAMP2P13473 410 aa11.61□□□□□ -0.55
SND1-210ENST00000483503 EPORP19235 508 aa11.61□□□□□ -0.55
SND1-210ENST00000483503 C5AR1P21730 350 aa11.61□□□□□ -0.55
SND1-210ENST00000483503 SLC6A2P23975 617 aa11.61□□□□□ -0.55
SND1-210ENST00000483503 TEAD1P28347 426 aa11.61□□□□□ -0.55
SND1-210ENST00000483503 SLC7A1P30825 629 aa11.61□□□□□ -0.55
SND1-210ENST00000483503 HALP42357 657 aa11.61□□□□□ -0.55
SND1-210ENST00000483503 ZFP36L2P47974 494 aaKnown RBP11.61□□□□□ -0.55
SND1-210ENST00000483503 HSPA13P48723 471 aa11.61□□□□□ -0.55
SND1-210ENST00000483503 PFN3P60673 137 aa11.61□□□□□ -0.55
SND1-210ENST00000483503 CNTN1Q12860 1018 aa11.61□□□□□ -0.55
SND1-210ENST00000483503 RPA4Q13156 261 aa11.61□□□□□ -0.55
SND1-210ENST00000483503 CHIT1Q13231 466 aa11.61□□□□□ -0.55
SND1-210ENST00000483503 ADAM15Q13444 863 aa11.61□□□□□ -0.55
SND1-210ENST00000483503 PWP1Q13610 501 aa11.61□□□□□ -0.55
SND1-210ENST00000483503 ENPP2Q13822 863 aa11.61□□□□□ -0.55
SND1-210ENST00000483503 CPSF6Q16630 551 aaKnown RBP eCLIP11.61□□□□□ -0.55
SND1-210ENST00000483503 TIGD2Q4W5G0 525 aa11.61□□□□□ -0.55
SND1-210ENST00000483503 RFTN2Q52LD8 501 aaPredicted RBP11.61□□□□□ -0.55
SND1-210ENST00000483503 SGO1Q5FBB7 561 aa11.61□□□□□ -0.55
SND1-210ENST00000483503 ZNF648Q5T619 568 aaPredicted RBP11.61□□□□□ -0.55
SND1-210ENST00000483503 FAM219BQ5XKK7 198 aa11.61□□□□□ -0.55
SND1-210ENST00000483503 FRG2Q64ET8 278 aa11.61□□□□□ -0.55
SND1-210ENST00000483503 AGTRAPQ6RW13 159 aa11.61□□□□□ -0.55
SND1-210ENST00000483503 UNC5DQ6UXZ4 953 aa11.61□□□□□ -0.55
SND1-210ENST00000483503 THOC6Q86W42 341 aaKnown RBP11.61□□□□□ -0.55
SND1-210ENST00000483503 TRAPPC5Q8IUR0 188 aa11.61□□□□□ -0.55
SND1-210ENST00000483503 AADATQ8N5Z0 425 aa11.61□□□□□ -0.55
SND1-210ENST00000483503 ICA1LQ8NDH6 482 aa11.61□□□□□ -0.55
SND1-210ENST00000483503 OR2T34Q8NGX1 318 aa11.61□□□□□ -0.55
SND1-210ENST00000483503 OR2T3Q8NH03 318 aa11.61□□□□□ -0.55
SND1-210ENST00000483503 OR56A3Q8NH54 315 aa11.61□□□□□ -0.55
SND1-210ENST00000483503 TMEM125Q96AQ2 219 aa11.61□□□□□ -0.55
SND1-210ENST00000483503 VPS33AQ96AX1 596 aa11.61□□□□□ -0.55
SND1-210ENST00000483503 REPS1Q96D71 796 aa11.61□□□□□ -0.55
SND1-210ENST00000483503 BTBD9Q96Q07 612 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms