RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 SPRED1Q7Z699 444 aa12.85□□□□□ -0.35
HDAC1-208ENST00000482310 AVL9Q8NBF6 648 aa12.85□□□□□ -0.35
HDAC1-208ENST00000482310 PPFIBP2Q8ND30 876 aa12.85□□□□□ -0.35
HDAC1-208ENST00000482310 ASB11Q8WXH4 323 aa12.85□□□□□ -0.35
HDAC1-208ENST00000482310 RSC1A1Q92681 617 aa12.85□□□□□ -0.35
HDAC1-208ENST00000482310 NAT6Q93015 286 aa12.85□□□□□ -0.35
HDAC1-208ENST00000482310 ISL2Q96A47 359 aa12.85□□□□□ -0.35
HDAC1-208ENST00000482310 SH3KBP1Q96B97 665 aa12.85□□□□□ -0.35
HDAC1-208ENST00000482310 UBXN10Q96LJ8 280 aa12.85□□□□□ -0.35
HDAC1-208ENST00000482310 PKP4Q99569 1192 aa12.85□□□□□ -0.35
HDAC1-208ENST00000482310 EGFL8Q99944 293 aa12.85□□□□□ -0.35
HDAC1-208ENST00000482310 SRMSQ9H3Y6 488 aa12.85□□□□□ -0.35
HDAC1-208ENST00000482310 RDH14Q9HBH5 336 aa12.85□□□□□ -0.35
HDAC1-208ENST00000482310 KLHL3Q9UH77 587 aa12.85□□□□□ -0.35
HDAC1-208ENST00000482310 LGALS13Q9UHV8 139 aa12.85□□□□□ -0.35
HDAC1-208ENST00000482310 RNF112Q9ULX5 631 aa12.85□□□□□ -0.35
HDAC1-208ENST00000482310 MDC1Q14676 2089 aaKnown RBP12.85□□□□□ -0.35
HDAC1-208ENST00000482310 CNOT1A5YKK6 2376 aaKnown RBP12.84□□□□□ -0.35
HDAC1-208ENST00000482310 GSAPA4D1B5 854 aa12.84□□□□□ -0.35
HDAC1-208ENST00000482310 GOLGA6L10A6NI86 522 aa12.84□□□□□ -0.35
HDAC1-208ENST00000482310 GFYI3L273 518 aa12.84□□□□□ -0.35
HDAC1-208ENST00000482310 RFPL3O75679 317 aa12.84□□□□□ -0.35
HDAC1-208ENST00000482310 UBXN7O94888 489 aa12.84□□□□□ -0.35
HDAC1-208ENST00000482310 PROS1P07225 676 aa12.84□□□□□ -0.35
HDAC1-208ENST00000482310 MYZAPP0CAP1 466 aa12.84□□□□□ -0.35
HDAC1-208ENST00000482310 TPBGLP0DKB5 382 aa12.84□□□□□ -0.35
HDAC1-208ENST00000482310 KRT4P19013 534 aa12.84□□□□□ -0.35
HDAC1-208ENST00000482310 POLR2CP19387 275 aaPredicted RBP12.84□□□□□ -0.35
HDAC1-208ENST00000482310 ACP1P24666 158 aa12.84□□□□□ -0.35
HDAC1-208ENST00000482310 CCNFP41002 786 aa12.84□□□□□ -0.35
HDAC1-208ENST00000482310 CSRP3P50461 194 aa12.84□□□□□ -0.35
HDAC1-208ENST00000482310 ATP6V0D1P61421 351 aa12.84□□□□□ -0.35
HDAC1-208ENST00000482310 SP140Q13342 867 aa12.84□□□□□ -0.35
HDAC1-208ENST00000482310 FASTKQ14296 549 aaKnown RBP12.84□□□□□ -0.35
HDAC1-208ENST00000482310 FAM83EQ2M2I3 478 aa12.84□□□□□ -0.35
HDAC1-208ENST00000482310 FBXO48Q5FWF7 155 aa12.84□□□□□ -0.35
HDAC1-208ENST00000482310 SNAP47Q5SQN1 464 aa12.84□□□□□ -0.35
HDAC1-208ENST00000482310 IRGCQ6NXR0 463 aa12.84□□□□□ -0.35
HDAC1-208ENST00000482310 SBSNQ6UWP8 590 aa12.84□□□□□ -0.35
HDAC1-208ENST00000482310 TIFABQ6ZNK6 161 aa12.84□□□□□ -0.35
HDAC1-208ENST00000482310 OR6C4Q8NGE1 309 aa12.84□□□□□ -0.35
HDAC1-208ENST00000482310 OR9A1PQ8NGU1 263 aa12.84□□□□□ -0.35
HDAC1-208ENST00000482310 MAGEC3Q8TD91 643 aa12.84□□□□□ -0.35
HDAC1-208ENST00000482310 MCOLN3Q8TDD5 553 aa12.84□□□□□ -0.35
HDAC1-208ENST00000482310 NCSTNQ92542 709 aa12.84□□□□□ -0.35
HDAC1-208ENST00000482310 RAD51AP1Q96B01 352 aa12.84□□□□□ -0.35
HDAC1-208ENST00000482310 MED8Q96G25 268 aa12.84□□□□□ -0.35
HDAC1-208ENST00000482310 CABS1Q96KC9 395 aa12.84□□□□□ -0.35
HDAC1-208ENST00000482310 TMEM109Q9BVC6 243 aa12.84□□□□□ -0.35
HDAC1-208ENST00000482310 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.84□□□□□ -0.35
HDAC1-208ENST00000482310 ABCG4Q9H172 646 aa12.84□□□□□ -0.35
HDAC1-208ENST00000482310 C12orf65Q9H3J6 166 aaKnown RBP12.84□□□□□ -0.35
HDAC1-208ENST00000482310 PARVBQ9HBI1 364 aa12.84□□□□□ -0.35
HDAC1-208ENST00000482310 NMRAL1Q9HBL8 299 aa12.84□□□□□ -0.35
HDAC1-208ENST00000482310 ARL15Q9NXU5 204 aa12.84□□□□□ -0.35
HDAC1-208ENST00000482310 CD274Q9NZQ7 290 aa12.84□□□□□ -0.35
HDAC1-208ENST00000482310 CPSF2Q9P2I0 782 aaKnown RBP12.84□□□□□ -0.35
HDAC1-208ENST00000482310 POLG2Q9UHN1 485 aa12.84□□□□□ -0.35
HDAC1-208ENST00000482310 ACACBO00763 2458 aa12.84□□□□□ -0.35
HDAC1-208ENST00000482310 ZFHX4Q86UP3 3567 aa12.84□□□□□ -0.35
HDAC1-208ENST00000482310 IGHV1OR21-1A0A087WYE8 117 aa12.83□□□□□ -0.36
HDAC1-208ENST00000482310 LILRA5A6NI73 299 aa12.83□□□□□ -0.36
HDAC1-208ENST00000482310 UBXN8O00124 270 aa12.83□□□□□ -0.36
HDAC1-208ENST00000482310 TK2O00142 265 aa12.83□□□□□ -0.36
HDAC1-208ENST00000482310 B4GAT1O43505 415 aa12.83□□□□□ -0.36
HDAC1-208ENST00000482310 DUX1O43812 170 aa12.83□□□□□ -0.36
HDAC1-208ENST00000482310 HIST1H2AGP0C0S8 130 aaPredicted RBP12.83□□□□□ -0.36
HDAC1-208ENST00000482310 FTH1P19P0C7X4 201 aa12.83□□□□□ -0.36
HDAC1-208ENST00000482310 CREB1P16220 341 aa12.83□□□□□ -0.36
HDAC1-208ENST00000482310 HIST1H2ADP20671 130 aa12.83□□□□□ -0.36
HDAC1-208ENST00000482310 PSMB5P28074 263 aa12.83□□□□□ -0.36
HDAC1-208ENST00000482310 PKLRP30613 574 aa12.83□□□□□ -0.36
HDAC1-208ENST00000482310 CSF2RBP32927 897 aa12.83□□□□□ -0.36
HDAC1-208ENST00000482310 GFERP55789 205 aa12.83□□□□□ -0.36
HDAC1-208ENST00000482310 GRB7Q14451 532 aa12.83□□□□□ -0.36
HDAC1-208ENST00000482310 C18orf21Q32NC0 220 aaPredicted RBP12.83□□□□□ -0.36
HDAC1-208ENST00000482310 ARMC6Q6NXE6 501 aa12.83□□□□□ -0.36
HDAC1-208ENST00000482310 SUSD1Q6UWL2 747 aa12.83□□□□□ -0.36
HDAC1-208ENST00000482310 DHRS13Q6UX07 377 aa12.83□□□□□ -0.36
HDAC1-208ENST00000482310 ZNF438Q7Z4V0 828 aa12.83□□□□□ -0.36
HDAC1-208ENST00000482310 ADAMTSL2Q86TH1 951 aa12.83□□□□□ -0.36
HDAC1-208ENST00000482310 SLCO6A1Q86UG4 719 aa12.83□□□□□ -0.36
HDAC1-208ENST00000482310 TRABD2AQ86V40 505 aa12.83□□□□□ -0.36
HDAC1-208ENST00000482310 AMIGO1Q86WK6 493 aa12.83□□□□□ -0.36
HDAC1-208ENST00000482310 OOSP2Q86WS3 158 aa12.83□□□□□ -0.36
HDAC1-208ENST00000482310 GPSM1Q86YR5 675 aa12.83□□□□□ -0.36
HDAC1-208ENST00000482310 RBM12BQ8IXT5 1001 aaKnown RBP12.83□□□□□ -0.36
HDAC1-208ENST00000482310 SYTL1Q8IYJ3 562 aa12.83□□□□□ -0.36
HDAC1-208ENST00000482310 RAB42Q8N4Z0 105 aa12.83□□□□□ -0.36
HDAC1-208ENST00000482310 PDLIM5Q96HC4 596 aaKnown RBP12.83□□□□□ -0.36
HDAC1-208ENST00000482310 HIST1H2AHQ96KK5 128 aa12.83□□□□□ -0.36
HDAC1-208ENST00000482310 TGM7Q96PF1 710 aa12.83□□□□□ -0.36
HDAC1-208ENST00000482310 HIST1H2AJQ99878 128 aa12.83□□□□□ -0.36
HDAC1-208ENST00000482310 NUDT22Q9BRQ3 303 aa12.83□□□□□ -0.36
HDAC1-208ENST00000482310 H2AFJQ9BTM1 129 aa12.83□□□□□ -0.36
HDAC1-208ENST00000482310 SLC12A9Q9BXP2 914 aa12.83□□□□□ -0.36
HDAC1-208ENST00000482310 TRIM54Q9BYV2 358 aa12.83□□□□□ -0.36
HDAC1-208ENST00000482310 ATG10Q9H0Y0 220 aa12.83□□□□□ -0.36
HDAC1-208ENST00000482310 LRRN3Q9H3W5 708 aa12.83□□□□□ -0.36
HDAC1-208ENST00000482310 HRASLS2Q9NWW9 162 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms