RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 UGT3A2Q3SY77 523 aa5.25□□□□□ -1.57
SF3B1-210ENST00000482158 DCAF10Q5QP82 559 aa5.25□□□□□ -1.57
SF3B1-210ENST00000482158 DCLRE1AQ6PJP8 1040 aa5.25□□□□□ -1.57
SF3B1-210ENST00000482158 PPP1R21Q6ZMI0 780 aa5.25□□□□□ -1.57
SF3B1-210ENST00000482158 MARK2Q7KZI7 788 aaKnown RBP5.25□□□□□ -1.57
SF3B1-210ENST00000482158 ARHGAP22Q7Z5H3 698 aa5.25□□□□□ -1.57
SF3B1-210ENST00000482158 GLRX5Q86SX6 157 aa5.25□□□□□ -1.57
SF3B1-210ENST00000482158 ZNF554Q86TJ5 538 aa5.25□□□□□ -1.57
SF3B1-210ENST00000482158 MFN1Q8IWA4 741 aa5.25□□□□□ -1.57
SF3B1-210ENST00000482158 CCAR2Q8N163 923 aaKnown RBP5.25□□□□□ -1.57
SF3B1-210ENST00000482158 ANKRD13CQ8N6S4 541 aa5.25□□□□□ -1.57
SF3B1-210ENST00000482158 MAPKAPK5-AS1Q8N8E1 139 aa5.25□□□□□ -1.57
SF3B1-210ENST00000482158 OR1J1Q8NGS3 322 aa5.25□□□□□ -1.57
SF3B1-210ENST00000482158 MOB3AQ96BX8 217 aa5.25□□□□□ -1.57
SF3B1-210ENST00000482158 SDF2L1Q9HCN8 221 aa5.25□□□□□ -1.57
SF3B1-210ENST00000482158 DAPK2Q9UIK4 370 aa5.25□□□□□ -1.57
SF3B1-210ENST00000482158 SLC7A7Q9UM01 511 aa5.25□□□□□ -1.57
SF3B1-210ENST00000482158 A0A1W2PRQ8 180 aa5.24□□□□□ -1.57
SF3B1-210ENST00000482158 CLIC2O15247 247 aa5.24□□□□□ -1.57
SF3B1-210ENST00000482158 LMX1BO60663 402 aa5.24□□□□□ -1.57
SF3B1-210ENST00000482158 FRMD6-AS1P0C7T7 363 aa5.24□□□□□ -1.57
SF3B1-210ENST00000482158 SCG2P13521 617 aa5.24□□□□□ -1.57
SF3B1-210ENST00000482158 FDPSP14324 419 aaKnown RBP5.24□□□□□ -1.57
SF3B1-210ENST00000482158 JAK1P23458 1154 aa5.24□□□□□ -1.57
SF3B1-210ENST00000482158 HSPA4P34932 840 aa5.24□□□□□ -1.57
SF3B1-210ENST00000482158 TIMP3P35625 211 aa5.24□□□□□ -1.57
SF3B1-210ENST00000482158 CDH11P55287 796 aa5.24□□□□□ -1.57
SF3B1-210ENST00000482158 UBASH3AP57075 661 aa5.24□□□□□ -1.57
SF3B1-210ENST00000482158 LINC01547P58512 204 aaPredicted RBP5.24□□□□□ -1.57
SF3B1-210ENST00000482158 PPARDQ03181 441 aa5.24□□□□□ -1.57
SF3B1-210ENST00000482158 MZT1Q08AG7 82 aa5.24□□□□□ -1.57
SF3B1-210ENST00000482158 ITGA7Q13683 1181 aa5.24□□□□□ -1.57
SF3B1-210ENST00000482158 ITPRIPL2Q3MIP1 535 aa5.24□□□□□ -1.57
SF3B1-210ENST00000482158 ZC2HC1CQ53FD0 456 aaPredicted RBP5.24□□□□□ -1.57
SF3B1-210ENST00000482158 ELFN2Q5R3F8 820 aa5.24□□□□□ -1.57
SF3B1-210ENST00000482158 MEX3BQ6ZN04 569 aaKnown RBP5.24□□□□□ -1.57
SF3B1-210ENST00000482158 THNSL1Q8IYQ7 743 aa5.24□□□□□ -1.57
SF3B1-210ENST00000482158 THAP8Q8NA92 274 aa5.24□□□□□ -1.57
SF3B1-210ENST00000482158 OR11H4Q8NGC9 324 aa5.24□□□□□ -1.57
SF3B1-210ENST00000482158 SENP5Q96HI0 755 aaPredicted RBP5.24□□□□□ -1.57
SF3B1-210ENST00000482158 ZNF354BQ96LW1 612 aa5.24□□□□□ -1.57
SF3B1-210ENST00000482158 FNBP1Q96RU3 617 aa5.24□□□□□ -1.57
SF3B1-210ENST00000482158 RAD9AQ99638 391 aa5.24□□□□□ -1.57
SF3B1-210ENST00000482158 LAT2Q9GZY6 243 aa5.24□□□□□ -1.57
SF3B1-210ENST00000482158 DNAJC4Q9NNZ3 241 aa5.24□□□□□ -1.57
SF3B1-210ENST00000482158 COQ3Q9NZJ6 369 aa5.24□□□□□ -1.57
SF3B1-210ENST00000482158 STK26Q9P289 416 aa5.24□□□□□ -1.57
SF3B1-210ENST00000482158 ZNF112Q9UJU3 913 aa5.24□□□□□ -1.57
SF3B1-210ENST00000482158 CPSF3Q9UKF6 684 aaKnown RBP5.24□□□□□ -1.57
SF3B1-210ENST00000482158 DUXAA6NLW8 204 aa5.23□□□□□ -1.57
SF3B1-210ENST00000482158 PRSS44E7EML9 344 aa5.23□□□□□ -1.57
SF3B1-210ENST00000482158 AP5Z1O43299 807 aa5.23□□□□□ -1.57
SF3B1-210ENST00000482158 FGF17O60258 216 aa5.23□□□□□ -1.57
SF3B1-210ENST00000482158 INHBAP08476 426 aa5.23□□□□□ -1.57
SF3B1-210ENST00000482158 LIFP15018 202 aa5.23□□□□□ -1.57
SF3B1-210ENST00000482158 TCF4P15884 667 aa5.23□□□□□ -1.57
SF3B1-210ENST00000482158 GNAZP19086 355 aa5.23□□□□□ -1.57
SF3B1-210ENST00000482158 CA4P22748 312 aa5.23□□□□□ -1.57
SF3B1-210ENST00000482158 GP5P40197 560 aa5.23□□□□□ -1.57
SF3B1-210ENST00000482158 CUL3Q13618 768 aa5.23□□□□□ -1.57
SF3B1-210ENST00000482158 C6orf136Q5SQH8 315 aa5.23□□□□□ -1.57
SF3B1-210ENST00000482158 GALNTL5Q7Z4T8 443 aa5.23□□□□□ -1.57
SF3B1-210ENST00000482158 TLK2Q86UE8 772 aa5.23□□□□□ -1.57
SF3B1-210ENST00000482158 NUDT13Q86X67 352 aa5.23□□□□□ -1.57
SF3B1-210ENST00000482158 IQUBQ8NA54 791 aa5.23□□□□□ -1.57
SF3B1-210ENST00000482158 CCDC107Q8WV48 283 aa5.23□□□□□ -1.57
SF3B1-210ENST00000482158 STAMBPL1Q96FJ0 436 aa5.23□□□□□ -1.57
SF3B1-210ENST00000482158 RAB3IPQ96QF0 476 aaPredicted RBP5.23□□□□□ -1.57
SF3B1-210ENST00000482158 NODALQ96S42 347 aa5.23□□□□□ -1.57
SF3B1-210ENST00000482158 CDH20Q9HBT6 801 aa5.23□□□□□ -1.57
SF3B1-210ENST00000482158 ZNF334Q9HCZ1 680 aaPredicted RBP5.23□□□□□ -1.57
SF3B1-210ENST00000482158 SDR39U1Q9NRG7 319 aaPredicted RBP5.23□□□□□ -1.57
SF3B1-210ENST00000482158 GKN1Q9NS71 199 aa5.23□□□□□ -1.57
SF3B1-210ENST00000482158 FAM118AQ9NWS6 357 aa5.23□□□□□ -1.57
SF3B1-210ENST00000482158 ZDHHC2Q9UIJ5 367 aa5.23□□□□□ -1.57
SF3B1-210ENST00000482158 NOTCH4Q99466 2003 aa5.23□□□□□ -1.57
SF3B1-210ENST00000482158 IGLV9-49A0A0B4J1Y8 123 aa5.22□□□□□ -1.57
SF3B1-210ENST00000482158 LOC101059948A0A1B0GTJ6 334 aa5.22□□□□□ -1.57
SF3B1-210ENST00000482158 FAM172BPA6NC97 362 aa5.22□□□□□ -1.57
SF3B1-210ENST00000482158 ANXA2P2A6NMY6 339 aa5.22□□□□□ -1.57
SF3B1-210ENST00000482158 DNM1LO00429 736 aa5.22□□□□□ -1.57
SF3B1-210ENST00000482158 PDX1P52945 283 aa5.22□□□□□ -1.57
SF3B1-210ENST00000482158 VEZF1Q14119 521 aa5.22□□□□□ -1.57
SF3B1-210ENST00000482158 MCMDC2Q4G0Z9 681 aa5.22□□□□□ -1.57
SF3B1-210ENST00000482158 STPG1Q5TH74 334 aa5.22□□□□□ -1.57
SF3B1-210ENST00000482158 SLC27A1Q6PCB7 646 aa5.22□□□□□ -1.57
SF3B1-210ENST00000482158 FAM219AQ8IW50 185 aa5.22□□□□□ -1.57
SF3B1-210ENST00000482158 DNAJC22Q8N4W6 341 aa5.22□□□□□ -1.57
SF3B1-210ENST00000482158 ZNF611Q8N823 705 aa5.22□□□□□ -1.57
SF3B1-210ENST00000482158 OCC1Q8TAD7 63 aa5.22□□□□□ -1.57
SF3B1-210ENST00000482158 FAM20AQ96MK3 541 aa5.22□□□□□ -1.57
SF3B1-210ENST00000482158 MGME1Q9BQP7 344 aa5.22□□□□□ -1.57
SF3B1-210ENST00000482158 RHNO1Q9BSD3 238 aa5.22□□□□□ -1.57
SF3B1-210ENST00000482158 KATNB1Q9BVA0 655 aa5.22□□□□□ -1.57
SF3B1-210ENST00000482158 Q9H8V8 135 aa5.22□□□□□ -1.57
SF3B1-210ENST00000482158 TBC1D7Q9P0N9 293 aa5.22□□□□□ -1.57
SF3B1-210ENST00000482158 TMED3Q9Y3Q3 217 aa5.22□□□□□ -1.57
SF3B1-210ENST00000482158 TRIM17Q9Y577 477 aa5.22□□□□□ -1.57
SF3B1-210ENST00000482158 A0A1W2PN81 502 aa5.21□□□□□ -1.58
SF3B1-210ENST00000482158 TBCAO75347 108 aaKnown RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms