RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 FOXL2P58012 376 aa17.9■□□□□ 0.46
CLK1-211ENST00000481641 PLOD1Q02809 727 aaPredicted RBP17.9■□□□□ 0.46
CLK1-211ENST00000481641 NCF4Q15080 339 aa17.9■□□□□ 0.46
CLK1-211ENST00000481641 CCNG2Q16589 344 aa17.9■□□□□ 0.46
CLK1-211ENST00000481641 NLRP9Q7RTR0 991 aa17.9■□□□□ 0.46
CLK1-211ENST00000481641 TAX1BP1Q86VP1 789 aa17.9■□□□□ 0.46
CLK1-211ENST00000481641 GPR135Q8IZ08 494 aa17.9■□□□□ 0.46
CLK1-211ENST00000481641 SLC22A15Q8IZD6 547 aa17.9■□□□□ 0.46
CLK1-211ENST00000481641 MIB2Q96AX9 1013 aa17.9■□□□□ 0.46
CLK1-211ENST00000481641 CARD6Q9BX69 1037 aa17.9■□□□□ 0.46
CLK1-211ENST00000481641 CATSPERZQ9NTU4 200 aa17.9■□□□□ 0.46
CLK1-211ENST00000481641 DHCR7Q9UBM7 475 aaKnown RBP17.9■□□□□ 0.46
CLK1-211ENST00000481641 A6NL46 340 aa17.89■□□□□ 0.45
CLK1-211ENST00000481641 ZNF185O15231 689 aa17.89■□□□□ 0.45
CLK1-211ENST00000481641 CD3EAPO15446 510 aaKnown RBP17.89■□□□□ 0.45
CLK1-211ENST00000481641 GPC4O75487 556 aa17.89■□□□□ 0.45
CLK1-211ENST00000481641 NMBRP28336 390 aa17.89■□□□□ 0.45
CLK1-211ENST00000481641 PKLRP30613 574 aa17.89■□□□□ 0.45
CLK1-211ENST00000481641 PGDP52209 483 aa17.89■□□□□ 0.45
CLK1-211ENST00000481641 TERF1P54274 439 aa17.89■□□□□ 0.45
CLK1-211ENST00000481641 BASP1P80723 227 aaKnown RBP17.89■□□□□ 0.45
CLK1-211ENST00000481641 ATP1A4Q13733 1029 aa17.89■□□□□ 0.45
CLK1-211ENST00000481641 SLC9A5Q14940 896 aa17.89■□□□□ 0.45
CLK1-211ENST00000481641 KYNUQ16719 465 aa17.89■□□□□ 0.45
CLK1-211ENST00000481641 NADK2Q4G0N4 442 aa17.89■□□□□ 0.45
CLK1-211ENST00000481641 DNAJC21Q5F1R6 531 aaKnown RBP17.89■□□□□ 0.45
CLK1-211ENST00000481641 PCID2Q5JVF3 399 aa17.89■□□□□ 0.45
CLK1-211ENST00000481641 MLIPQ5VWP3 458 aa17.89■□□□□ 0.45
CLK1-211ENST00000481641 CES3Q6UWW8 571 aa17.89■□□□□ 0.45
CLK1-211ENST00000481641 TMEM151BQ8IW70 566 aa17.89■□□□□ 0.45
CLK1-211ENST00000481641 DNAJC22Q8N4W6 341 aa17.89■□□□□ 0.45
CLK1-211ENST00000481641 ZNF655Q8N720 491 aaPredicted RBP17.89■□□□□ 0.45
CLK1-211ENST00000481641 LINC01555Q8NAE3 123 aa17.89■□□□□ 0.45
CLK1-211ENST00000481641 SGSM3Q96HU1 749 aa17.89■□□□□ 0.45
CLK1-211ENST00000481641 MLXIPLQ9NP71 852 aa17.89■□□□□ 0.45
CLK1-211ENST00000481641 ANAPC5Q9UJX4 755 aa17.89■□□□□ 0.45
CLK1-211ENST00000481641 C9J4A7 227 aa17.88■□□□□ 0.45
CLK1-211ENST00000481641 FGGP02679 453 aa17.88■□□□□ 0.45
CLK1-211ENST00000481641 HBQ1P09105 142 aa17.88■□□□□ 0.45
CLK1-211ENST00000481641 AGXTP21549 392 aa17.88■□□□□ 0.45
CLK1-211ENST00000481641 AOAHP28039 575 aa17.88■□□□□ 0.45
CLK1-211ENST00000481641 OTX2P32243 289 aa17.88■□□□□ 0.45
CLK1-211ENST00000481641 SRSF1Q07955 248 aaKnown RBP eCLIP17.88■□□□□ 0.45
CLK1-211ENST00000481641 GRB7Q14451 532 aa17.88■□□□□ 0.45
CLK1-211ENST00000481641 KIR2DS3Q14952 304 aa17.88■□□□□ 0.45
CLK1-211ENST00000481641 SLC5A12Q1EHB4 618 aa17.88■□□□□ 0.45
CLK1-211ENST00000481641 GSTA5Q7RTV2 222 aa17.88■□□□□ 0.45
CLK1-211ENST00000481641 FDCSPQ8NFU4 85 aa17.88■□□□□ 0.45
CLK1-211ENST00000481641 ASZ1Q8WWH4 475 aa17.88■□□□□ 0.45
CLK1-211ENST00000481641 MENTQ9BUN1 341 aa17.88■□□□□ 0.45
CLK1-211ENST00000481641 TREX1Q9NSU2 369 aa17.88■□□□□ 0.45
CLK1-211ENST00000481641 IRAK4Q9NWZ3 460 aa17.88■□□□□ 0.45
CLK1-211ENST00000481641 DRG1Q9Y295 367 aaKnown RBP17.88■□□□□ 0.45
CLK1-211ENST00000481641 PCDHGA9Q9Y5G4 932 aaKnown RBP17.88■□□□□ 0.45
CLK1-211ENST00000481641 TCRBV7S3A2A0A539 114 aa17.87■□□□□ 0.45
CLK1-211ENST00000481641 KRT87PA6NCN2 255 aa17.87■□□□□ 0.45
CLK1-211ENST00000481641 F8W8V4 182 aa17.87■□□□□ 0.45
CLK1-211ENST00000481641 PRMT5O14744 637 aaPredicted RBP17.87■□□□□ 0.45
CLK1-211ENST00000481641 ZSCAN9O15535 394 aaPredicted RBP17.87■□□□□ 0.45
CLK1-211ENST00000481641 KLF7O75840 302 aaPredicted RBP17.87■□□□□ 0.45
CLK1-211ENST00000481641 APOA4P06727 396 aa17.87■□□□□ 0.45
CLK1-211ENST00000481641 MAGP20916 626 aa17.87■□□□□ 0.45
CLK1-211ENST00000481641 MGAT1P26572 445 aa17.87■□□□□ 0.45
CLK1-211ENST00000481641 PPARGP37231 505 aaPredicted RBP17.87■□□□□ 0.45
CLK1-211ENST00000481641 RAB28P51157 221 aa17.87■□□□□ 0.45
CLK1-211ENST00000481641 RAPSNQ13702 412 aa17.87■□□□□ 0.45
CLK1-211ENST00000481641 UBAP2LQ14157 1087 aaKnown RBP17.87■□□□□ 0.45
CLK1-211ENST00000481641 AARS2Q5JTZ9 985 aaKnown RBP17.87■□□□□ 0.45
CLK1-211ENST00000481641 PTRHD1Q6GMV3 140 aaKnown RBP17.87■□□□□ 0.45
CLK1-211ENST00000481641 RHBDD2Q6NTF9 364 aa17.87■□□□□ 0.45
CLK1-211ENST00000481641 DRICH1Q6PGQ1 229 aaPredicted RBP17.87■□□□□ 0.45
CLK1-211ENST00000481641 PEX13Q92968 403 aa17.87■□□□□ 0.45
CLK1-211ENST00000481641 GBP5Q96PP8 586 aa17.87■□□□□ 0.45
CLK1-211ENST00000481641 DPH2Q9BQC3 489 aaPredicted RBP17.87■□□□□ 0.45
CLK1-211ENST00000481641 NUDT9Q9BW91 350 aa17.87■□□□□ 0.45
CLK1-211ENST00000481641 TSSK1BQ9BXA7 367 aa17.87■□□□□ 0.45
CLK1-211ENST00000481641 CHRNA10Q9GZZ6 450 aa17.87■□□□□ 0.45
CLK1-211ENST00000481641 P2RY12Q9H244 342 aa17.87■□□□□ 0.45
CLK1-211ENST00000481641 EIF2B3Q9NR50 452 aaKnown RBP17.87■□□□□ 0.45
CLK1-211ENST00000481641 SYBUQ9NX95 663 aa17.87■□□□□ 0.45
CLK1-211ENST00000481641 RUVBL2Q9Y230 463 aaKnown RBP17.87■□□□□ 0.45
CLK1-211ENST00000481641 NFS1Q9Y697 457 aa17.87■□□□□ 0.45
CLK1-211ENST00000481641 AP1M2Q9Y6Q5 423 aa17.87■□□□□ 0.45
CLK1-211ENST00000481641 LRRK2Q5S007 2527 aa17.87■□□□□ 0.45
CLK1-211ENST00000481641 TTLL8A6PVC2 850 aa17.86■□□□□ 0.45
CLK1-211ENST00000481641 GOLGA8KD6RF30 607 aa17.86■□□□□ 0.45
CLK1-211ENST00000481641 GOLGA8TH3BQL2 631 aa17.86■□□□□ 0.45
CLK1-211ENST00000481641 MASP2O00187 686 aa17.86■□□□□ 0.45
CLK1-211ENST00000481641 CEP104O60308 925 aa17.86■□□□□ 0.45
CLK1-211ENST00000481641 KDM1AO60341 852 aa17.86■□□□□ 0.45
CLK1-211ENST00000481641 CNOT3O75175 753 aaKnown RBP17.86■□□□□ 0.45
CLK1-211ENST00000481641 CEACAM4O75871 244 aa17.86■□□□□ 0.45
CLK1-211ENST00000481641 SLCO2B1O94956 709 aa17.86■□□□□ 0.45
CLK1-211ENST00000481641 CXCR5P32302 372 aa17.86■□□□□ 0.45
CLK1-211ENST00000481641 GRIA3P42263 894 aa17.86■□□□□ 0.45
CLK1-211ENST00000481641 TTPAP49638 278 aa17.86■□□□□ 0.45
CLK1-211ENST00000481641 TRIP13Q15645 432 aaPredicted RBP17.86■□□□□ 0.45
CLK1-211ENST00000481641 CCSMST1Q4G0I0 132 aa17.86■□□□□ 0.45
CLK1-211ENST00000481641 DCUN1D3Q8IWE4 304 aa17.86■□□□□ 0.45
CLK1-211ENST00000481641 UBE2Q2Q8WVN8 375 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms