RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 BTN3A3O00478 584 aa19.13■□□□□ 0.65
LIME1-205ENST00000480139 BTN3A1O00481 513 aa19.13■□□□□ 0.65
LIME1-205ENST00000480139 ERGP11308 486 aa19.13■□□□□ 0.65
LIME1-205ENST00000480139 MAP4P27816 1152 aaKnown RBP19.13■□□□□ 0.65
LIME1-205ENST00000480139 CRABP2P29373 138 aa19.13■□□□□ 0.65
LIME1-205ENST00000480139 HSD17B2P37059 387 aa19.13■□□□□ 0.65
LIME1-205ENST00000480139 CSRP3P50461 194 aa19.13■□□□□ 0.65
LIME1-205ENST00000480139 GFERP55789 205 aa19.13■□□□□ 0.65
LIME1-205ENST00000480139 FOXK2Q01167 660 aa19.13■□□□□ 0.65
LIME1-205ENST00000480139 ARHGAP19Q14CB8 494 aa19.13■□□□□ 0.65
LIME1-205ENST00000480139 CCSMST1Q4G0I0 132 aa19.13■□□□□ 0.65
LIME1-205ENST00000480139 PHF19Q5T6S3 580 aa19.13■□□□□ 0.65
LIME1-205ENST00000480139 ARMC6Q6NXE6 501 aa19.13■□□□□ 0.65
LIME1-205ENST00000480139 UBE2R2Q712K3 238 aaPredicted RBP19.13■□□□□ 0.65
LIME1-205ENST00000480139 PRSS42Q7Z5A4 293 aa19.13■□□□□ 0.65
LIME1-205ENST00000480139 ARHGAP22Q7Z5H3 698 aa19.13■□□□□ 0.65
LIME1-205ENST00000480139 SPNS2Q8IVW8 549 aa19.13■□□□□ 0.65
LIME1-205ENST00000480139 OR9A1PQ8NGU1 263 aa19.13■□□□□ 0.65
LIME1-205ENST00000480139 OR2L8Q8NGY9 312 aa19.13■□□□□ 0.65
LIME1-205ENST00000480139 DCAKDQ8WVC6 231 aa19.13■□□□□ 0.65
LIME1-205ENST00000480139 UBLCP1Q8WVY7 318 aaPredicted RBP19.13■□□□□ 0.65
LIME1-205ENST00000480139 ISL2Q96A47 359 aa19.13■□□□□ 0.65
LIME1-205ENST00000480139 MRRFQ96E11 262 aaKnown RBP19.13■□□□□ 0.65
LIME1-205ENST00000480139 CCDC77Q9BR77 488 aa19.13■□□□□ 0.65
LIME1-205ENST00000480139 SLC12A9Q9BXP2 914 aa19.13■□□□□ 0.65
LIME1-205ENST00000480139 XKR8Q9H6D3 395 aa19.13■□□□□ 0.65
LIME1-205ENST00000480139 POMT2Q9UKY4 750 aa19.13■□□□□ 0.65
LIME1-205ENST00000480139 KNTC1P50748 2209 aa19.12■□□□□ 0.65
LIME1-205ENST00000480139 CCDC187A0A096LP49 1063 aa19.12■□□□□ 0.65
LIME1-205ENST00000480139 C2orf74A8MZ97 194 aa19.12■□□□□ 0.65
LIME1-205ENST00000480139 POC1B-GALNT4F8VUJ3 575 aa19.12■□□□□ 0.65
LIME1-205ENST00000480139 KRT38O76015 456 aa19.12■□□□□ 0.65
LIME1-205ENST00000480139 ENO2P09104 434 aaPredicted RBP19.12■□□□□ 0.65
LIME1-205ENST00000480139 POLR2CP19387 275 aaPredicted RBP19.12■□□□□ 0.65
LIME1-205ENST00000480139 CYP2A7P20853 494 aa19.12■□□□□ 0.65
LIME1-205ENST00000480139 SLC26A3P40879 764 aa19.12■□□□□ 0.65
LIME1-205ENST00000480139 CYP2A13Q16696 494 aa19.12■□□□□ 0.65
LIME1-205ENST00000480139 MROH9Q5TGP6 573 aa19.12■□□□□ 0.65
LIME1-205ENST00000480139 ANKS6Q68DC2 871 aa19.12■□□□□ 0.65
LIME1-205ENST00000480139 IRGCQ6NXR0 463 aa19.12■□□□□ 0.65
LIME1-205ENST00000480139 DENND1AQ8TEH3 1009 aa19.12■□□□□ 0.65
LIME1-205ENST00000480139 UBXN10Q96LJ8 280 aa19.12■□□□□ 0.65
LIME1-205ENST00000480139 TGM7Q96PF1 710 aa19.12■□□□□ 0.65
LIME1-205ENST00000480139 NRSN2Q9GZP1 204 aa19.12■□□□□ 0.65
LIME1-205ENST00000480139 DERL2Q9GZP9 239 aa19.12■□□□□ 0.65
LIME1-205ENST00000480139 PPCSQ9HAB8 311 aa19.12■□□□□ 0.65
LIME1-205ENST00000480139 PARVBQ9HBI1 364 aa19.12■□□□□ 0.65
LIME1-205ENST00000480139 LNPEPQ9UIQ6 1025 aa19.12■□□□□ 0.65
LIME1-205ENST00000480139 ADAMTS6Q9UKP5 1117 aa19.12■□□□□ 0.65
LIME1-205ENST00000480139 PLAGL1Q9UM63 463 aa19.12■□□□□ 0.65
LIME1-205ENST00000480139 NOVA2Q9UNW9 492 aaKnown RBP19.12■□□□□ 0.65
LIME1-205ENST00000480139 PIPSLA2A3N6 862 aa19.11■□□□□ 0.65
LIME1-205ENST00000480139 TLCD2A6NGC4 264 aa19.11■□□□□ 0.65
LIME1-205ENST00000480139 ZNF839A8K0R7 811 aa19.11■□□□□ 0.65
LIME1-205ENST00000480139 PHGDHO43175 533 aaKnown RBP19.11■□□□□ 0.65
LIME1-205ENST00000480139 CHRM5P08912 532 aaPredicted RBP19.11■□□□□ 0.65
LIME1-205ENST00000480139 SLC35E2BP0CK96 405 aa19.11■□□□□ 0.65
LIME1-205ENST00000480139 SPINK2P20155 84 aa19.11■□□□□ 0.65
LIME1-205ENST00000480139 GCAP28676 217 aa19.11■□□□□ 0.65
LIME1-205ENST00000480139 SERPINB8P50452 374 aa19.11■□□□□ 0.65
LIME1-205ENST00000480139 BMPR2Q13873 1038 aa19.11■□□□□ 0.65
LIME1-205ENST00000480139 KIR2DS3Q14952 304 aa19.11■□□□□ 0.65
LIME1-205ENST00000480139 ADGRD1Q6QNK2 874 aa19.11■□□□□ 0.65
LIME1-205ENST00000480139 LINC01555Q8NAE3 123 aa19.11■□□□□ 0.65
LIME1-205ENST00000480139 WDR36Q8NI36 951 aaKnown RBP19.11■□□□□ 0.65
LIME1-205ENST00000480139 MCOLN3Q8TDD5 553 aa19.11■□□□□ 0.65
LIME1-205ENST00000480139 ANKRD49Q8WVL7 239 aa19.11■□□□□ 0.65
LIME1-205ENST00000480139 DLG3Q92796 817 aa19.11■□□□□ 0.65
LIME1-205ENST00000480139 SLC22A18Q96BI1 424 aa19.11■□□□□ 0.65
LIME1-205ENST00000480139 NRTNQ99748 197 aa19.11■□□□□ 0.65
LIME1-205ENST00000480139 CMKLR1Q99788 373 aa19.11■□□□□ 0.65
LIME1-205ENST00000480139 PITPNM3Q9BZ71 974 aa19.11■□□□□ 0.65
LIME1-205ENST00000480139 ZNF768Q9H5H4 540 aaKnown RBP19.11■□□□□ 0.65
LIME1-205ENST00000480139 RRAGDQ9NQL2 400 aaPredicted RBP19.11■□□□□ 0.65
LIME1-205ENST00000480139 AKAP7Q9P0M2 348 aaPredicted RBP19.11■□□□□ 0.65
LIME1-205ENST00000480139 PDE10AQ9Y233 779 aa19.11■□□□□ 0.65
LIME1-205ENST00000480139 ADAMTS20P59510 1910 aa19.1■□□□□ 0.65
LIME1-205ENST00000480139 GSAPA4D1B5 854 aa19.1■□□□□ 0.65
LIME1-205ENST00000480139 KRT37O76014 449 aa19.1■□□□□ 0.65
LIME1-205ENST00000480139 ALDOAP04075 364 aaKnown RBP19.1■□□□□ 0.65
LIME1-205ENST00000480139 CCDC166P0CW27 439 aa19.1■□□□□ 0.65
LIME1-205ENST00000480139 MPSTP25325 297 aa19.1■□□□□ 0.65
LIME1-205ENST00000480139 PRDX3P30048 256 aaKnown RBP19.1■□□□□ 0.65
LIME1-205ENST00000480139 HSD17B3P37058 310 aa19.1■□□□□ 0.65
LIME1-205ENST00000480139 MAGEA12P43365 314 aa19.1■□□□□ 0.65
LIME1-205ENST00000480139 KPNA2P52292 529 aaKnown RBP19.1■□□□□ 0.65
LIME1-205ENST00000480139 AP1S2P56377 157 aa19.1■□□□□ 0.65
LIME1-205ENST00000480139 ATP6V0D1P61421 351 aa19.1■□□□□ 0.65
LIME1-205ENST00000480139 PPP1CAP62136 330 aa19.1■□□□□ 0.65
LIME1-205ENST00000480139 C16orf72Q14CZ0 275 aa19.1■□□□□ 0.65
LIME1-205ENST00000480139 LGSNQ5TDP6 509 aa19.1■□□□□ 0.65
LIME1-205ENST00000480139 SBSNQ6UWP8 590 aa19.1■□□□□ 0.65
LIME1-205ENST00000480139 FAM92BQ6ZTR7 304 aa19.1■□□□□ 0.65
LIME1-205ENST00000480139 RAPH1Q70E73 1250 aa19.1■□□□□ 0.65
LIME1-205ENST00000480139 RAB11FIP2Q7L804 512 aa19.1■□□□□ 0.65
LIME1-205ENST00000480139 CMC1Q7Z7K0 106 aa19.1■□□□□ 0.65
LIME1-205ENST00000480139 KMT5CQ86Y97 462 aa19.1■□□□□ 0.65
LIME1-205ENST00000480139 MARCH9Q86YJ5 346 aa19.1■□□□□ 0.65
LIME1-205ENST00000480139 MREGQ8N565 214 aa19.1■□□□□ 0.65
LIME1-205ENST00000480139 AGBL5Q8NDL9 886 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms