RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 PIPSLA2A3N6 862 aa10.49□□□□□ -0.73
ATG4B-219ENST00000479941 GSAPA4D1B5 854 aa10.49□□□□□ -0.73
ATG4B-219ENST00000479941 TLCD2A6NGC4 264 aa10.49□□□□□ -0.73
ATG4B-219ENST00000479941 ARHGEF33A8MVX0 844 aa10.49□□□□□ -0.73
ATG4B-219ENST00000479941 MYO1CO00159 1063 aa10.49□□□□□ -0.73
ATG4B-219ENST00000479941 SLC16A5O15375 505 aa10.49□□□□□ -0.73
ATG4B-219ENST00000479941 KIF1CO43896 1103 aaKnown RBP10.49□□□□□ -0.73
ATG4B-219ENST00000479941 DXOO77932 396 aaKnown RBP10.49□□□□□ -0.73
ATG4B-219ENST00000479941 TSPAN12O95859 305 aa10.49□□□□□ -0.73
ATG4B-219ENST00000479941 C8GP07360 202 aa10.49□□□□□ -0.73
ATG4B-219ENST00000479941 ITGA2BP08514 1039 aa10.49□□□□□ -0.73
ATG4B-219ENST00000479941 STMN1P16949 149 aa10.49□□□□□ -0.73
ATG4B-219ENST00000479941 ZNF37AP17032 561 aaPredicted RBP10.49□□□□□ -0.73
ATG4B-219ENST00000479941 CYP2A7P20853 494 aa10.49□□□□□ -0.73
ATG4B-219ENST00000479941 MAP4P27816 1152 aaKnown RBP10.49□□□□□ -0.73
ATG4B-219ENST00000479941 RBMS1P29558 406 aaKnown RBP10.49□□□□□ -0.73
ATG4B-219ENST00000479941 PRDX3P30048 256 aaKnown RBP10.49□□□□□ -0.73
ATG4B-219ENST00000479941 HSD17B2P37059 387 aa10.49□□□□□ -0.73
ATG4B-219ENST00000479941 BDKRB1P46663 353 aa10.49□□□□□ -0.73
ATG4B-219ENST00000479941 PMS2P54278 862 aa10.49□□□□□ -0.73
ATG4B-219ENST00000479941 TAS2R39P59534 338 aa10.49□□□□□ -0.73
ATG4B-219ENST00000479941 PPP1CAP62136 330 aa10.49□□□□□ -0.73
ATG4B-219ENST00000479941 SP140Q13342 867 aa10.49□□□□□ -0.73
ATG4B-219ENST00000479941 KIR2DS3Q14952 304 aa10.49□□□□□ -0.73
ATG4B-219ENST00000479941 FOXR1Q6PIV2 292 aa10.49□□□□□ -0.73
ATG4B-219ENST00000479941 UBE2R2Q712K3 238 aaPredicted RBP10.49□□□□□ -0.73
ATG4B-219ENST00000479941 PIWIL4Q7Z3Z4 852 aaKnown RBP10.49□□□□□ -0.73
ATG4B-219ENST00000479941 KMT5CQ86Y97 462 aa10.49□□□□□ -0.73
ATG4B-219ENST00000479941 RASGRP3Q8IV61 690 aa10.49□□□□□ -0.73
ATG4B-219ENST00000479941 OR9A1PQ8NGU1 263 aa10.49□□□□□ -0.73
ATG4B-219ENST00000479941 OR2L8Q8NGY9 312 aa10.49□□□□□ -0.73
ATG4B-219ENST00000479941 HMGCLL1Q8TB92 370 aa10.49□□□□□ -0.73
ATG4B-219ENST00000479941 KLHL6Q8WZ60 621 aa10.49□□□□□ -0.73
ATG4B-219ENST00000479941 SLC22A18Q96BI1 424 aa10.49□□□□□ -0.73
ATG4B-219ENST00000479941 LINGO1Q96FE5 620 aa10.49□□□□□ -0.73
ATG4B-219ENST00000479941 PDLIM5Q96HC4 596 aaKnown RBP10.49□□□□□ -0.73
ATG4B-219ENST00000479941 SLC46A1Q96NT5 459 aa10.49□□□□□ -0.73
ATG4B-219ENST00000479941 GPR22Q99680 433 aa10.49□□□□□ -0.73
ATG4B-219ENST00000479941 NRTNQ99748 197 aa10.49□□□□□ -0.73
ATG4B-219ENST00000479941 MAP3K3Q99759 626 aa10.49□□□□□ -0.73
ATG4B-219ENST00000479941 TWSG1Q9GZX9 223 aa10.49□□□□□ -0.73
ATG4B-219ENST00000479941 CCDC86Q9H6F5 360 aaKnown RBP10.49□□□□□ -0.73
ATG4B-219ENST00000479941 GPAMQ9HCL2 828 aa10.49□□□□□ -0.73
ATG4B-219ENST00000479941 C1GALT1Q9NS00 363 aa10.49□□□□□ -0.73
ATG4B-219ENST00000479941 POMT2Q9UKY4 750 aa10.49□□□□□ -0.73
ATG4B-219ENST00000479941 PLAGL1Q9UM63 463 aa10.49□□□□□ -0.73
ATG4B-219ENST00000479941 CELSR3Q9NYQ7 3312 aa10.49□□□□□ -0.73
ATG4B-219ENST00000479941 ACACAQ13085 2346 aa10.49□□□□□ -0.73
ATG4B-219ENST00000479941 TMEM8BA6NDV4 472 aa10.48□□□□□ -0.73
ATG4B-219ENST00000479941 ZNF839A8K0R7 811 aa10.48□□□□□ -0.73
ATG4B-219ENST00000479941 C1QTNF9BB2RNN3 333 aa10.48□□□□□ -0.73
ATG4B-219ENST00000479941 B4E171 279 aa10.48□□□□□ -0.73
ATG4B-219ENST00000479941 RIPK2O43353 540 aa10.48□□□□□ -0.73
ATG4B-219ENST00000479941 BRINP1O60477 761 aa10.48□□□□□ -0.73
ATG4B-219ENST00000479941 ABHD2P08910 425 aa10.48□□□□□ -0.73
ATG4B-219ENST00000479941 CHRM5P08912 532 aaPredicted RBP10.48□□□□□ -0.73
ATG4B-219ENST00000479941 FAM153BP0C7A2 387 aa10.48□□□□□ -0.73
ATG4B-219ENST00000479941 C1QTNF9P0C862 333 aa10.48□□□□□ -0.73
ATG4B-219ENST00000479941 MYBL2P10244 700 aa10.48□□□□□ -0.73
ATG4B-219ENST00000479941 HGFP14210 728 aa10.48□□□□□ -0.73
ATG4B-219ENST00000479941 CDH3P22223 829 aa10.48□□□□□ -0.73
ATG4B-219ENST00000479941 TSPAN7P41732 249 aa10.48□□□□□ -0.73
ATG4B-219ENST00000479941 SEPHS1P49903 392 aa10.48□□□□□ -0.73
ATG4B-219ENST00000479941 KPNA2P52292 529 aaKnown RBP10.48□□□□□ -0.73
ATG4B-219ENST00000479941 CYP4F3Q08477 520 aa10.48□□□□□ -0.73
ATG4B-219ENST00000479941 USP10Q14694 798 aaKnown RBP10.48□□□□□ -0.73
ATG4B-219ENST00000479941 ARHGAP19Q14CB8 494 aa10.48□□□□□ -0.73
ATG4B-219ENST00000479941 EFTUD2Q15029 972 aaKnown RBP eCLIP10.48□□□□□ -0.73
ATG4B-219ENST00000479941 ZKSCAN8Q15776 578 aaPredicted RBP10.48□□□□□ -0.73
ATG4B-219ENST00000479941 FAM153CQ494X1 144 aa10.48□□□□□ -0.73
ATG4B-219ENST00000479941 CCSMST1Q4G0I0 132 aa10.48□□□□□ -0.73
ATG4B-219ENST00000479941 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.48□□□□□ -0.73
ATG4B-219ENST00000479941 UBAP2Q5T6F2 1119 aaKnown RBP10.48□□□□□ -0.73
ATG4B-219ENST00000479941 ANKS6Q68DC2 871 aa10.48□□□□□ -0.73
ATG4B-219ENST00000479941 CYB5D1Q6P9G0 228 aa10.48□□□□□ -0.73
ATG4B-219ENST00000479941 SPESP1Q6UW49 350 aa10.48□□□□□ -0.73
ATG4B-219ENST00000479941 TMEM207Q6UWW9 146 aa10.48□□□□□ -0.73
ATG4B-219ENST00000479941 CEP97Q8IW35 865 aa10.48□□□□□ -0.73
ATG4B-219ENST00000479941 LINC01555Q8NAE3 123 aa10.48□□□□□ -0.73
ATG4B-219ENST00000479941 MCOLN3Q8TDD5 553 aa10.48□□□□□ -0.73
ATG4B-219ENST00000479941 ANKRD7Q92527 254 aa10.48□□□□□ -0.73
ATG4B-219ENST00000479941 PRR11Q96HE9 360 aaPredicted RBP10.48□□□□□ -0.73
ATG4B-219ENST00000479941 SLC41A2Q96JW4 573 aa10.48□□□□□ -0.73
ATG4B-219ENST00000479941 ZNF578Q96N58 590 aaPredicted RBP10.48□□□□□ -0.73
ATG4B-219ENST00000479941 SLC12A9Q9BXP2 914 aa10.48□□□□□ -0.73
ATG4B-219ENST00000479941 PITPNM3Q9BZ71 974 aa10.48□□□□□ -0.73
ATG4B-219ENST00000479941 TXLNGYQ9BZA5 131 aa10.48□□□□□ -0.73
ATG4B-219ENST00000479941 B3GNT4Q9C0J1 378 aa10.48□□□□□ -0.73
ATG4B-219ENST00000479941 THSD1Q9NS62 852 aa10.48□□□□□ -0.73
ATG4B-219ENST00000479941 ACTR10Q9NZ32 417 aa10.48□□□□□ -0.73
ATG4B-219ENST00000479941 PISDQ9UG56 409 aa10.48□□□□□ -0.73
ATG4B-219ENST00000479941 PCDHGA7Q9Y5G6 932 aa10.48□□□□□ -0.73
ATG4B-219ENST00000479941 IKBKGQ9Y6K9 419 aa10.48□□□□□ -0.73
ATG4B-219ENST00000479941 APC2O95996 2303 aa10.48□□□□□ -0.73
ATG4B-219ENST00000479941 KIF26BQ2KJY2 2108 aa10.48□□□□□ -0.73
ATG4B-219ENST00000479941 ZFHX4Q86UP3 3567 aa10.47□□□□□ -0.73
ATG4B-219ENST00000479941 IGHV5-51A0A0C4DH38 117 aa10.47□□□□□ -0.73
ATG4B-219ENST00000479941 PABPN1LA6NDY0 278 aaKnown RBP10.47□□□□□ -0.73
ATG4B-219ENST00000479941 EFCAB7A8K855 629 aa10.47□□□□□ -0.73
ATG4B-219ENST00000479941 ISM1B1AKI9 464 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms