RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 ARNTLO00327 626 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 SEC24AO95486 1093 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 MLYCDO95822 493 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 HLA-DPA1P20036 260 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 EPHA2P29317 976 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 MAGEA11P43364 429 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 ZNF140P52738 457 aaPredicted RBP13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 ILF2Q12905 390 aaKnown RBP13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 GBX1Q14549 363 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 CLCA4Q14CN2 919 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 PON2Q15165 354 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 TYSND1Q2T9J0 566 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 AP5B1Q2VPB7 878 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 ATAD3BQ5T9A4 648 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 EFHBQ8N7U6 833 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 LPCAT1Q8NF37 534 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 GTF2H4Q92759 462 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 CCDC115Q96NT0 180 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 NACA2Q9H009 215 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 RMND5AQ9H871 391 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 CD274Q9NZQ7 290 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 FKBPLQ9UIM3 349 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 ERVK-11Q9UQG0 969 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 CXCR6O00574 342 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 KLK8O60259 260 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 NDST3O95803 873 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 MT-ND2P03891 347 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 SLC10A3P09131 477 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 CCDC159P0C7I6 412 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 SPNP16150 400 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 CA5AP35218 305 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 SLC35A2P78381 396 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 IFITM2Q01629 132 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 CYP4F3Q08477 520 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 FAM174BQ3ZCQ3 159 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 MINDY2Q8NBR6 621 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 NETO1Q8TDF5 533 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 NCLNQ969V3 563 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 PYCR2Q96C36 320 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 C1QTNF3Q9BXJ4 246 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 TRIT1Q9H3H1 467 aaKnown RBP13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 DSN1Q9H410 356 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 SARS2Q9NP81 518 aaKnown RBP13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 NECTIN3Q9NQS3 549 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 PCDHGB1Q9Y5G3 927 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 NUP214P35658 2090 aaPredicted RBP13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 F5H5T6 163 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 TMEM189-UBE2V1I3L0A0 370 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 CBX4O00257 560 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 STX16O14662 325 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 KCNK2O95069 426 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 B3GALT4O96024 378 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 IRF1P10914 325 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 ALDH7A1P49419 539 aaKnown RBP13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 NKX3-2P78367 333 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 EPS8Q12929 822 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 TOP3AQ13472 1001 aaPredicted RBP13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 GCNT7Q6ZNI0 430 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 GLT6D1Q7Z4J2 308 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 EID3Q8N140 333 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 SVOPLQ8N434 492 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 KRTCAP2Q8N6L1 136 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 OR8J3Q8NGG0 315 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 FBLIM1Q8WUP2 373 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 BHMTQ93088 406 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 MGME1Q9BQP7 344 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 RIBC2Q9H4K1 309 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 ITM2CQ9NQX7 267 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 PCDH10Q9P2E7 1040 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 ZMYM5Q9UJ78 669 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 ATP11BQ9Y2G3 1177 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 NOX1Q9Y5S8 564 aa13.03□□□□□ -0.32
PDZRN3-208ENST00000479530 ANKRD36A6QL64 1941 aa13.02□□□□□ -0.32
PDZRN3-208ENST00000479530 ELOVL7A1L3X0 281 aa13.02□□□□□ -0.32
PDZRN3-208ENST00000479530 SLC16A6O15403 523 aa13.02□□□□□ -0.32
PDZRN3-208ENST00000479530 SERPINA1P01009 418 aa13.02□□□□□ -0.32
PDZRN3-208ENST00000479530 LCKP06239 509 aa13.02□□□□□ -0.32
PDZRN3-208ENST00000479530 RYKP34925 604 aa13.02□□□□□ -0.32
PDZRN3-208ENST00000479530 EIF2DP41214 584 aaKnown RBP13.02□□□□□ -0.32
PDZRN3-208ENST00000479530 YBEYP58557 167 aaPredicted RBP13.02□□□□□ -0.32
PDZRN3-208ENST00000479530 VAC14Q08AM6 782 aa13.02□□□□□ -0.32
PDZRN3-208ENST00000479530 SPANXN4Q5MJ08 99 aa13.02□□□□□ -0.32
PDZRN3-208ENST00000479530 CEP68Q76N32 757 aa13.02□□□□□ -0.32
PDZRN3-208ENST00000479530 ARMC8Q8IUR7 673 aa13.02□□□□□ -0.32
PDZRN3-208ENST00000479530 DBF4BQ8NFT6 615 aa13.02□□□□□ -0.32
PDZRN3-208ENST00000479530 RHOXF1Q8NHV9 184 aa13.02□□□□□ -0.32
PDZRN3-208ENST00000479530 PHF10Q8WUB8 498 aaKnown RBP13.02□□□□□ -0.32
PDZRN3-208ENST00000479530 SLC13A3Q8WWT9 602 aa13.02□□□□□ -0.32
PDZRN3-208ENST00000479530 LGALS12Q96DT0 336 aa13.02□□□□□ -0.32
PDZRN3-208ENST00000479530 LINGO1Q96FE5 620 aa13.02□□□□□ -0.32
PDZRN3-208ENST00000479530 NLE1Q9NVX2 485 aaPredicted RBP13.02□□□□□ -0.32
PDZRN3-208ENST00000479530 PKP3Q9Y446 797 aa13.02□□□□□ -0.32
PDZRN3-208ENST00000479530 GBF1Q92538 1859 aa13.02□□□□□ -0.33
PDZRN3-208ENST00000479530 GREB1Q4ZG55 1949 aa13.02□□□□□ -0.33
PDZRN3-208ENST00000479530 SLC38A8A6NNN8 435 aa13.02□□□□□ -0.33
PDZRN3-208ENST00000479530 TBX1O43435 398 aa13.02□□□□□ -0.33
PDZRN3-208ENST00000479530 CA12O43570 354 aa13.02□□□□□ -0.33
PDZRN3-208ENST00000479530 ACSL4O60488 711 aa13.02□□□□□ -0.33
PDZRN3-208ENST00000479530 DNAJB5O75953 348 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms