RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 C1orf87Q8N0U7 546 aa4.82□□□□□ -1.64
RFC4-212ENST00000479307 SLC5A8Q8N695 610 aa4.82□□□□□ -1.64
RFC4-212ENST00000479307 POGLUT1Q8NBL1 392 aa4.82□□□□□ -1.64
RFC4-212ENST00000479307 KCTD6Q8NC69 237 aa4.82□□□□□ -1.64
RFC4-212ENST00000479307 CCDC191Q8NCU4 936 aa4.82□□□□□ -1.64
RFC4-212ENST00000479307 ACVR1CQ8NER5 493 aa4.82□□□□□ -1.64
RFC4-212ENST00000479307 PPP4R1Q8TF05 950 aa4.82□□□□□ -1.64
RFC4-212ENST00000479307 LPGAT1Q92604 370 aa4.82□□□□□ -1.64
RFC4-212ENST00000479307 NEUROG1Q92886 237 aa4.82□□□□□ -1.64
RFC4-212ENST00000479307 BADQ92934 168 aa4.82□□□□□ -1.64
RFC4-212ENST00000479307 ZBTB9Q96C00 473 aa4.82□□□□□ -1.64
RFC4-212ENST00000479307 RTP4Q96DX8 246 aa4.82□□□□□ -1.64
RFC4-212ENST00000479307 TMEM19Q96HH6 336 aa4.82□□□□□ -1.64
RFC4-212ENST00000479307 ZNF479Q96JC4 524 aa4.82□□□□□ -1.64
RFC4-212ENST00000479307 PRMT6Q96LA8 375 aaPredicted RBP4.82□□□□□ -1.64
RFC4-212ENST00000479307 DGAT2Q96PD7 388 aa4.82□□□□□ -1.64
RFC4-212ENST00000479307 SMC6Q96SB8 1091 aa4.82□□□□□ -1.64
RFC4-212ENST00000479307 GFI1Q99684 422 aa4.82□□□□□ -1.64
RFC4-212ENST00000479307 SLCO5A1Q9H2Y9 848 aa4.82□□□□□ -1.64
RFC4-212ENST00000479307 RCC2Q9P258 522 aaKnown RBP4.82□□□□□ -1.64
RFC4-212ENST00000479307 LARSQ9P2J5 1176 aaKnown RBP4.82□□□□□ -1.64
RFC4-212ENST00000479307 NFKBIL1Q9UBC1 381 aaPredicted RBP4.82□□□□□ -1.64
RFC4-212ENST00000479307 ANAPC2Q9UJX6 822 aa4.82□□□□□ -1.64
RFC4-212ENST00000479307 VDAC3Q9Y277 283 aa4.82□□□□□ -1.64
RFC4-212ENST00000479307 PCDHGA5Q9Y5G8 931 aa4.82□□□□□ -1.64
RFC4-212ENST00000479307 PLXNA3P51805 1871 aa4.81□□□□□ -1.64
RFC4-212ENST00000479307 KMT2EQ8IZD2 1858 aa4.81□□□□□ -1.64
RFC4-212ENST00000479307 LOC285556D6RIA3 1793 aa4.81□□□□□ -1.64
RFC4-212ENST00000479307 CLSPNQ9HAW4 1339 aa4.81□□□□□ -1.64
RFC4-212ENST00000479307 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.81□□□□□ -1.64
RFC4-212ENST00000479307 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.81□□□□□ -1.64
RFC4-212ENST00000479307 A0A1W2PP11 408 aa4.81□□□□□ -1.64
RFC4-212ENST00000479307 CLGNO14967 610 aa4.81□□□□□ -1.64
RFC4-212ENST00000479307 SMAD6O43541 496 aaKnown RBP4.81□□□□□ -1.64
RFC4-212ENST00000479307 DKC1O60832 514 aaKnown RBP eCLIP4.81□□□□□ -1.64
RFC4-212ENST00000479307 NTN1O95631 604 aa4.81□□□□□ -1.64
RFC4-212ENST00000479307 GJA1P17302 382 aa4.81□□□□□ -1.64
RFC4-212ENST00000479307 CORO1AP31146 461 aaKnown RBP4.81□□□□□ -1.64
RFC4-212ENST00000479307 CAPZA2P47755 286 aa4.81□□□□□ -1.64
RFC4-212ENST00000479307 THBS3P49746 956 aa4.81□□□□□ -1.64
RFC4-212ENST00000479307 KIF5AQ12840 1032 aa4.81□□□□□ -1.64
RFC4-212ENST00000479307 FAM98BQ52LJ0 330 aaKnown RBP4.81□□□□□ -1.64
RFC4-212ENST00000479307 RAB6CQ53S08 254 aa4.81□□□□□ -1.64
RFC4-212ENST00000479307 C9orf152Q5JTZ5 239 aa4.81□□□□□ -1.64
RFC4-212ENST00000479307 ERMARDQ5T6L9 678 aa4.81□□□□□ -1.64
RFC4-212ENST00000479307 ADALQ6DHV7 355 aa4.81□□□□□ -1.64
RFC4-212ENST00000479307 RPUSD3Q6P087 351 aaKnown RBP4.81□□□□□ -1.64
RFC4-212ENST00000479307 ZNF534Q76KX8 674 aa4.81□□□□□ -1.64
RFC4-212ENST00000479307 ATG9AQ7Z3C6 839 aa4.81□□□□□ -1.64
RFC4-212ENST00000479307 LDB1Q86U70 411 aaPredicted RBP4.81□□□□□ -1.64
RFC4-212ENST00000479307 CERS5Q8N5B7 392 aa4.81□□□□□ -1.64
RFC4-212ENST00000479307 ABTB1Q969K4 478 aaPredicted RBP4.81□□□□□ -1.64
RFC4-212ENST00000479307 ADGRG7Q96K78 797 aa4.81□□□□□ -1.64
RFC4-212ENST00000479307 NEK1Q96PY6 1258 aa4.81□□□□□ -1.64
RFC4-212ENST00000479307 HGH1Q9BTY7 390 aa4.81□□□□□ -1.64
RFC4-212ENST00000479307 RAB6CQ9H0N0 254 aa4.81□□□□□ -1.64
RFC4-212ENST00000479307 CHMP1AQ9HD42 196 aaPredicted RBP4.81□□□□□ -1.64
RFC4-212ENST00000479307 CD93Q9NPY3 652 aa4.81□□□□□ -1.64
RFC4-212ENST00000479307 TMEM30AQ9NV96 361 aa4.81□□□□□ -1.64
RFC4-212ENST00000479307 TAS2R14Q9NYV8 317 aa4.81□□□□□ -1.64
RFC4-212ENST00000479307 TSPYL4Q9UJ04 414 aa4.81□□□□□ -1.64
RFC4-212ENST00000479307 ZNF711Q9Y462 761 aa4.81□□□□□ -1.64
RFC4-212ENST00000479307 ZFHX2Q9C0A1 2572 aaPredicted RBP4.8□□□□□ -1.64
RFC4-212ENST00000479307 SRRM3A6NNA2 597 aaPredicted RBP4.8□□□□□ -1.64
RFC4-212ENST00000479307 J3QR06 171 aa4.8□□□□□ -1.64
RFC4-212ENST00000479307 UBE2CO00762 179 aa4.8□□□□□ -1.64
RFC4-212ENST00000479307 SLC16A5O15375 505 aa4.8□□□□□ -1.64
RFC4-212ENST00000479307 ZBTB43O43298 467 aa4.8□□□□□ -1.64
RFC4-212ENST00000479307 T-ENOLP0DO92 83 aa4.8□□□□□ -1.64
RFC4-212ENST00000479307 SNHG28P0DPA3 235 aa4.8□□□□□ -1.64
RFC4-212ENST00000479307 EEF1DP29692 281 aaKnown RBP4.8□□□□□ -1.64
RFC4-212ENST00000479307 GNL1P36915 607 aaPredicted RBP4.8□□□□□ -1.64
RFC4-212ENST00000479307 MATR3P43243 847 aaKnown RBP eCLIP4.8□□□□□ -1.64
RFC4-212ENST00000479307 FOXG1P55316 489 aaPredicted RBP4.8□□□□□ -1.64
RFC4-212ENST00000479307 DSCR9P59020 149 aa4.8□□□□□ -1.64
RFC4-212ENST00000479307 EEF1A1P68104 462 aaKnown RBP4.8□□□□□ -1.64
RFC4-212ENST00000479307 PPP2R2BQ00005 443 aa4.8□□□□□ -1.64
RFC4-212ENST00000479307 SNTA1Q13424 505 aa4.8□□□□□ -1.64
RFC4-212ENST00000479307 ZNF234Q14588 700 aa4.8□□□□□ -1.64
RFC4-212ENST00000479307 KYNUQ16719 465 aa4.8□□□□□ -1.64
RFC4-212ENST00000479307 EEF1A1P5Q5VTE0 462 aa4.8□□□□□ -1.64
RFC4-212ENST00000479307 MCM10Q7L590 875 aa4.8□□□□□ -1.64
RFC4-212ENST00000479307 GALNT13Q8IUC8 556 aa4.8□□□□□ -1.64
RFC4-212ENST00000479307 TSPAN14Q8NG11 270 aa4.8□□□□□ -1.64
RFC4-212ENST00000479307 HMGCLL1Q8TB92 370 aa4.8□□□□□ -1.64
RFC4-212ENST00000479307 BICD1Q96G01 975 aa4.8□□□□□ -1.64
RFC4-212ENST00000479307 SLC22A12Q96S37 553 aa4.8□□□□□ -1.64
RFC4-212ENST00000479307 CDRT15Q96T59 188 aa4.8□□□□□ -1.64
RFC4-212ENST00000479307 BAG1Q99933 345 aaPredicted RBP4.8□□□□□ -1.64
RFC4-212ENST00000479307 ZPBPQ9BS86 351 aa4.8□□□□□ -1.64
RFC4-212ENST00000479307 PPIL3Q9H2H8 161 aaKnown RBP4.8□□□□□ -1.64
RFC4-212ENST00000479307 RABEP2Q9H5N1 569 aa4.8□□□□□ -1.64
RFC4-212ENST00000479307 GAREM1Q9H706 876 aa4.8□□□□□ -1.64
RFC4-212ENST00000479307 GDE1Q9NZC3 331 aa4.8□□□□□ -1.64
RFC4-212ENST00000479307 TRPV2Q9Y5S1 764 aa4.8□□□□□ -1.64
RFC4-212ENST00000479307 SETXQ7Z333 2677 aaKnown RBP4.79□□□□□ -1.64
RFC4-212ENST00000479307 MAGEA13PA6NCF6 341 aa4.79□□□□□ -1.64
RFC4-212ENST00000479307 ANKRD66B4E2M5 251 aa4.79□□□□□ -1.64
RFC4-212ENST00000479307 TMEM189-UBE2V1I3L0A0 370 aa4.79□□□□□ -1.64
RFC4-212ENST00000479307 DNM1LO00429 736 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms