RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 TFE3P19532 575 aaPredicted RBP5.35□□□□□ -1.55
USF3-202ENST00000478658 RPS3P23396 243 aaKnown RBP eCLIP5.35□□□□□ -1.55
USF3-202ENST00000478658 ADPRHP54922 357 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 DMWDQ09019 674 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 DYRK1AQ13627 763 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 RIN1Q13671 783 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 CRY1Q16526 586 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 SPATS1Q496A3 300 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 SPDYCQ5MJ68 293 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 MANEALQ5VSG8 457 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 MAMDC2Q7Z304 686 aaPredicted RBP5.35□□□□□ -1.55
USF3-202ENST00000478658 OR5L1Q8NGL2 311 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 ZNF512BQ96KM6 892 aaPredicted RBP5.35□□□□□ -1.55
USF3-202ENST00000478658 UBL7Q96S82 380 aaPredicted RBP5.35□□□□□ -1.55
USF3-202ENST00000478658 MYOCQ99972 504 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 TRMT61BQ9BVS5 477 aaKnown RBP5.35□□□□□ -1.55
USF3-202ENST00000478658 ASB8Q9H765 288 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 TBC1D17Q9HA65 648 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 ADGRL3Q9HAR2 1447 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 CD320Q9NPF0 282 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 GPR83Q9NYM4 423 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 TAS2R8Q9NYW2 309 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 CFAP97Q9P2B7 532 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 SLC2A6Q9UGQ3 507 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 STUB1Q9UNE7 303 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 ZDHHC9Q9Y397 364 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 TRAPPC13A5PLN9 417 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 NPEPPSL1A6NEC2 478 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 KIAA1324LA8MWY0 1029 aaPredicted RBP5.34□□□□□ -1.55
USF3-202ENST00000478658 ABLIM1O14639 778 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 MID1O15344 667 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 STAG3L3P0CL85 134 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 PKMP14618 531 aaKnown RBP5.34□□□□□ -1.55
USF3-202ENST00000478658 FOLH1Q04609 750 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 CHI3L2Q15782 390 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 FAM131AQ6UXB0 335 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 SPATA6LQ8N4H0 392 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.34□□□□□ -1.55
USF3-202ENST00000478658 ADAMTS18Q8TE60 1221 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 TSPEARQ8WU66 669 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 CMKLR1Q99788 373 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 LRRN3Q9H3W5 708 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 C14orf93Q9H972 538 aaKnown RBP5.34□□□□□ -1.55
USF3-202ENST00000478658 TCF7L2Q9NQB0 619 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 PNPLA3Q9NST1 481 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.34□□□□□ -1.55
USF3-202ENST00000478658 RPL26L1Q9UNX3 145 aaKnown RBP5.34□□□□□ -1.55
USF3-202ENST00000478658 SLC6A5Q9Y345 797 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 LGALS16A8MUM7 142 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 NPIPA5E9PKD4 350 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 OR10H3O60404 316 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 IL33O95760 270 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 DBIP07108 87 aaKnown RBP5.34□□□□□ -1.55
USF3-202ENST00000478658 TGM1P22735 817 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 FMO4P31512 558 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 UGT1A3P35503 534 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 BRCC3P46736 316 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 ADARP55265 1226 aaKnown RBP5.34□□□□□ -1.55
USF3-202ENST00000478658 RAB8AP61006 207 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 ATP6V0D1P61421 351 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 USP46P62068 366 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 OGDHQ02218 1023 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 RAPSNQ13702 412 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 RAB12Q6IQ22 244 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 ZNF613Q6PF04 617 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 HAGHLQ6PII5 290 aaPredicted RBP5.34□□□□□ -1.55
USF3-202ENST00000478658 COMTD1Q86VU5 262 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 C17orf64Q86WR6 236 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 SNX29P2Q8IUI4 249 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 ANKRD13CQ8N6S4 541 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 TEX19Q8NA77 164 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 OR51E2Q9H255 320 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 KCTD10Q9H3F6 313 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 SAR1AQ9NR31 198 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 POLR3BQ9NW08 1133 aaPredicted RBP5.34□□□□□ -1.55
USF3-202ENST00000478658 RHBDL2Q9NX52 303 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 SLAIN2Q9P270 581 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 NPIPA1Q9UND3 350 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 SALL3Q9BXA9 1300 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 ATP10AO60312 1499 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 LOC102723532A0A0G2JNH3 316 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 LOC100506127A0A0U1RQW1 187 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 ZNF878C9JN71 531 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 JUPP14923 745 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 GNB3P16520 340 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 NCS1P62166 190 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 MARC1Q5VT66 337 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 HMBOX1Q6NT76 420 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 INTS5Q6P9B9 1019 aaKnown RBP5.34□□□□□ -1.55
USF3-202ENST00000478658 HFE2Q6ZVN8 426 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 ACOT1Q86TX2 421 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 KBTBD6Q86V97 674 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 TRAPPC5Q8IUR0 188 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 SVOPLQ8N434 492 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 OR2T12Q8NG77 320 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 PIGKQ92643 395 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 TAAR8Q969N4 342 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 ZNF514Q96K75 400 aaPredicted RBP5.34□□□□□ -1.55
USF3-202ENST00000478658 FAM111AQ96PZ2 611 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 CMSS1Q9BQ75 279 aaKnown RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms