RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 MYH3P11055 1940 aa3.89□□□□□ -1.79
CDC42BPA-212ENST00000478573 MAP3K5Q99683 1374 aa3.89□□□□□ -1.79
CDC42BPA-212ENST00000478573 H0YIN7 160 aa3.89□□□□□ -1.79
CDC42BPA-212ENST00000478573 PRAMEF11O60813 436 aa3.89□□□□□ -1.79
CDC42BPA-212ENST00000478573 BCL10O95999 233 aa3.89□□□□□ -1.79
CDC42BPA-212ENST00000478573 FYNP06241 537 aa3.89□□□□□ -1.79
CDC42BPA-212ENST00000478573 CCDC175P0C221 793 aa3.89□□□□□ -1.79
CDC42BPA-212ENST00000478573 GLULP15104 373 aa3.89□□□□□ -1.79
CDC42BPA-212ENST00000478573 GJA1P17302 382 aa3.89□□□□□ -1.79
CDC42BPA-212ENST00000478573 S1PR1P21453 382 aa3.89□□□□□ -1.79
CDC42BPA-212ENST00000478573 NMBRP28336 390 aa3.89□□□□□ -1.79
CDC42BPA-212ENST00000478573 PPP2R2BQ00005 443 aa3.89□□□□□ -1.79
CDC42BPA-212ENST00000478573 MYBPHQ13203 477 aa3.89□□□□□ -1.79
CDC42BPA-212ENST00000478573 KRT33BQ14525 404 aa3.89□□□□□ -1.79
CDC42BPA-212ENST00000478573 NR1D2Q14995 579 aa3.89□□□□□ -1.79
CDC42BPA-212ENST00000478573 RRS1Q15050 365 aaKnown RBP3.89□□□□□ -1.79
CDC42BPA-212ENST00000478573 SNAPC1Q16533 368 aa3.89□□□□□ -1.79
CDC42BPA-212ENST00000478573 CALCRLQ16602 461 aa3.89□□□□□ -1.79
CDC42BPA-212ENST00000478573 CST9LP1Q5W188 147 aa3.89□□□□□ -1.79
CDC42BPA-212ENST00000478573 MEX3BQ6ZN04 569 aaKnown RBP3.89□□□□□ -1.79
CDC42BPA-212ENST00000478573 Q75L30 129 aa3.89□□□□□ -1.79
CDC42BPA-212ENST00000478573 CAMKMTQ7Z624 323 aa3.89□□□□□ -1.79
CDC42BPA-212ENST00000478573 GPR180Q86V85 440 aa3.89□□□□□ -1.79
CDC42BPA-212ENST00000478573 VSIG1Q86XK7 387 aa3.89□□□□□ -1.79
CDC42BPA-212ENST00000478573 MAML2Q8IZL2 1156 aaPredicted RBP3.89□□□□□ -1.79
CDC42BPA-212ENST00000478573 PGBD5Q8N414 524 aa3.89□□□□□ -1.79
CDC42BPA-212ENST00000478573 RBM15BQ8NDT2 890 aaKnown RBP3.89□□□□□ -1.79
CDC42BPA-212ENST00000478573 SPATA22Q8NHS9 363 aa3.89□□□□□ -1.79
CDC42BPA-212ENST00000478573 CFAP61Q8NHU2 1237 aa3.89□□□□□ -1.79
CDC42BPA-212ENST00000478573 UTP15Q8TED0 518 aaKnown RBP3.89□□□□□ -1.79
CDC42BPA-212ENST00000478573 VPS33AQ96AX1 596 aa3.89□□□□□ -1.79
CDC42BPA-212ENST00000478573 IL17FQ96PD4 163 aa3.89□□□□□ -1.79
CDC42BPA-212ENST00000478573 SYT17Q9BSW7 474 aa3.89□□□□□ -1.79
CDC42BPA-212ENST00000478573 CHMP1AQ9HD42 196 aaPredicted RBP3.89□□□□□ -1.79
CDC42BPA-212ENST00000478573 OLAHQ9NV23 265 aa3.89□□□□□ -1.79
CDC42BPA-212ENST00000478573 DDX25Q9UHL0 483 aaKnown RBP3.89□□□□□ -1.79
CDC42BPA-212ENST00000478573 KLHL20Q9Y2M5 609 aa3.89□□□□□ -1.79
CDC42BPA-212ENST00000478573 PCDHAC2Q9Y5I4 1007 aa3.89□□□□□ -1.79
CDC42BPA-212ENST00000478573 SNX9Q9Y5X1 595 aa3.89□□□□□ -1.79
CDC42BPA-212ENST00000478573 PTPRCP08575 1304 aa3.89□□□□□ -1.79
CDC42BPA-212ENST00000478573 KDM6AO15550 1401 aaPredicted RBP3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 URADA6NGE7 173 aa3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 LILRA5A6NI73 299 aa3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 TSPY2A6NKD2 308 aa3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 J3QR06 171 aa3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 BMPR1BO00238 502 aa3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 MID1O15344 667 aa3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 LMX1BO60663 402 aa3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 ZWINTO95229 277 aa3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 C22orf31O95567 290 aa3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 HSPA4LO95757 839 aa3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 TSPY3P0CV98 308 aa3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 TSPY8P0CW00 308 aa3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 SCG2P13521 617 aa3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 PEX5P50542 639 aa3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 CSE1LP55060 971 aaKnown RBP3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 BRWD1-AS2P59051 145 aa3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 TSPY1Q01534 308 aa3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 DDR1Q08345 913 aa3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 TFCP2Q12800 502 aa3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 ZNF155Q12901 538 aaPredicted RBP3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 MELKQ14680 651 aa3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 ALDH1L2Q3SY69 923 aa3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 XKR9Q5GH70 373 aa3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 STPG1Q5TH74 334 aa3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 TMEM211Q6ICI0 200 aa3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 TEX38Q6PEX7 206 aa3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 SLC5A8Q8N695 610 aa3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 POC1AQ8NBT0 407 aa3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 ZNF114Q8NC26 417 aa3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 PAPD5Q8NDF8 572 aaKnown RBP3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 OR6J1Q8NGC5 347 aa3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 HMGCLL1Q8TB92 370 aa3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 MTBPQ96DY7 904 aa3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 ZNF830Q96NB3 372 aaPredicted RBP3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 OR1F2PQ96R84 312 aa3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 MTERF1Q99551 399 aaKnown RBP3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 MOV10L1Q9BXT6 1211 aaKnown RBP3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 ANKRD2Q9GZV1 360 aa3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 PANK3Q9H999 370 aa3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 PIH1D3Q9NQM4 214 aaKnown RBP3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 HAO2Q9NYQ3 351 aa3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 SMARCAL1Q9NZC9 954 aa3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 ZNF224Q9NZL3 707 aa3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 POLKQ9UBT6 870 aa3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 SIX4Q9UIU6 781 aa3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 TUBE1Q9UJT0 475 aa3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 B3GALT5Q9Y2C3 310 aa3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 AMDHD2Q9Y303 409 aa3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 KNSTRNQ9Y448 316 aa3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 NFS1Q9Y697 457 aa3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 FER1L6Q2WGJ9 1857 aa3.88□□□□□ -1.79
CDC42BPA-212ENST00000478573 TNRC6CQ9HCJ0 1690 aaKnown RBP3.87□□□□□ -1.79
CDC42BPA-212ENST00000478573 IGLV5-37A0A075B6J1 123 aa3.87□□□□□ -1.79
CDC42BPA-212ENST00000478573 EDDM13A0A1B0GTR0 161 aa3.87□□□□□ -1.79
CDC42BPA-212ENST00000478573 TMEM189-UBE2V1I3L0A0 370 aa3.87□□□□□ -1.79
CDC42BPA-212ENST00000478573 DVL1O14640 695 aa3.87□□□□□ -1.79
CDC42BPA-212ENST00000478573 RECQL5O94762 991 aaPredicted RBP3.87□□□□□ -1.79
CDC42BPA-212ENST00000478573 CLDN14O95500 239 aa3.87□□□□□ -1.79
CDC42BPA-212ENST00000478573 TRUB2O95900 331 aaKnown RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms