RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 FZD1Q9UP38 647 aa3.46□□□□□ -1.86
FNDC3B-209ENST00000478016 NCKAP1Q9Y2A7 1128 aa3.46□□□□□ -1.86
FNDC3B-209ENST00000478016 PLLPQ9Y342 182 aa3.46□□□□□ -1.86
FNDC3B-209ENST00000478016 REXO2Q9Y3B8 237 aaKnown RBP3.46□□□□□ -1.86
FNDC3B-209ENST00000478016 HBS1LQ9Y450 684 aaKnown RBP3.46□□□□□ -1.86
FNDC3B-209ENST00000478016 LRRC42Q9Y546 428 aa3.46□□□□□ -1.86
FNDC3B-209ENST00000478016 KLF2Q9Y5W3 355 aaPredicted RBP3.46□□□□□ -1.86
FNDC3B-209ENST00000478016 SNX14Q9Y5W7 946 aa3.46□□□□□ -1.86
FNDC3B-209ENST00000478016 NR2E3Q9Y5X4 410 aa3.46□□□□□ -1.86
FNDC3B-209ENST00000478016 RNF215Q9Y6U7 377 aa3.46□□□□□ -1.86
FNDC3B-209ENST00000478016 SETD1AO15047 1707 aaKnown RBP3.46□□□□□ -1.86
FNDC3B-209ENST00000478016 XIRP1Q702N8 1843 aaKnown RBP3.46□□□□□ -1.86
FNDC3B-209ENST00000478016 MED14O60244 1454 aa3.46□□□□□ -1.86
FNDC3B-209ENST00000478016 ABCC5O15440 1437 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 FGD6Q6ZV73 1430 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 MIA2Q96PC5 1412 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 A0A087WV48 116 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 A0A1B0GTW7 788 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 TCRBV21S2A2A0A5A6 115 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 BCLAF3A2AJT9 711 aaKnown RBP3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 FAM149AA5PLN7 773 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 SMCO2A6NFE2 343 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 OOEPA6NGQ2 149 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 LIPT2A6NK58 231 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 TRIM77I1YAP6 450 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 ZNF701M0R085 212 aaPredicted RBP3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 PGRMC1O00264 195 aaKnown RBP3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 SLC33A1O00400 549 aaPredicted RBP3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 SLC9A3R1O14745 358 aaPredicted RBP3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 PRPF4O43172 522 aaKnown RBP eCLIP3.45□□□□□ -1.863e-15■□□□□ 8.6
FNDC3B-209ENST00000478016 ARHGEF9O43307 516 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 KCNQ3O43525 872 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 NARSO43776 548 aaKnown RBP3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 SSX5O60225 188 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 TBX19O60806 448 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 SLC43A1O75387 559 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 PSIP1O75475 530 aaKnown RBP3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 PSMD10O75832 226 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 CLPXO76031 633 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 NCR1O76036 304 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 PDE5AO76074 875 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 KAT7O95251 611 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 PGLSO95336 258 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 OR2C1O95371 312 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 BMP10O95393 424 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 LDLRP01130 860 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 CRYABP02511 175 aaKnown RBP3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 TFRCP02786 760 aaKnown RBP3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 PCCBP05166 539 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 SERPINA6P08185 405 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 KRT7P08729 469 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 ABHD2P08910 425 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 SBK3P0C264 359 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 LINGO3P0C6S8 592 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 GSTT2P0CG29 244 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 GSTT2BP0CG30 244 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 CHRNB1P11230 501 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 MLNP12872 115 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 BRAFP15056 766 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 TCF4P15884 667 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 MAKP20794 623 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 AGAP20933 346 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 NT5EP21589 574 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 NR4A1P22736 598 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 SLC6A4P31645 630 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 HNRNPH1P31943 449 aaKnown RBP3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 ATP5C1P36542 298 aaKnown RBP3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 FEN1P39748 380 aaKnown RBP3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 MAGEA11P43364 429 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 CCR10P46092 362 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 SLC1A6P48664 564 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 LMAN1P49257 510 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 ENTPD1P49961 510 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 MAP2K6P52564 334 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 COPB1P53618 953 aaKnown RBP3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 MTTPP55157 894 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 CDH4P55283 916 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 CSNK1G2P78368 415 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 GLO1Q04760 184 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 MYO1EQ12965 1108 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 RESTQ13127 1097 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 OLIG2Q13516 323 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 CAPRIN1Q14444 709 aaKnown RBP3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 NR1D2Q14995 579 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 FASTKD3Q14CZ7 662 aaKnown RBP3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 SHBQ15464 509 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 GPR68Q15743 365 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 KRT24Q2M2I5 525 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 NADK2Q4G0N4 442 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 TIGD2Q4W5G0 525 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 CCDC157Q569K6 752 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 ZNF311Q5JNZ3 666 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 PAGE2BQ5JRK9 111 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 EOGTQ5NDL2 527 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 C6orf163Q5TEZ5 329 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 FNDC7Q5VTL7 733 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 CST9LP1Q5W188 147 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 ARL6IP4Q66PJ3 421 aaKnown RBP3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 ZNF425Q6IV72 752 aa3.45□□□□□ -1.86
FNDC3B-209ENST00000478016 ANO7Q6IWH7 933 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms