RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-222	ENST00000477937	SLC38A9	Q8NBW4	561 aa		13.34	□□□□□ -0.27
HDAC7-222	ENST00000477937	OR1L3	Q8NH93	324 aa		13.34	□□□□□ -0.27
HDAC7-222	ENST00000477937	SEC14L1	Q92503	715 aa		13.34	□□□□□ -0.27
HDAC7-222	ENST00000477937	CLIP3	Q96DZ5	547 aa		13.34	□□□□□ -0.27
HDAC7-222	ENST00000477937	TWSG1	Q9GZX9	223 aa		13.34	□□□□□ -0.27
HDAC7-222	ENST00000477937	KCNF1	Q9H3M0	494 aa		13.34	□□□□□ -0.27
HDAC7-222	ENST00000477937	ACTL8	Q9H568	366 aa		13.34	□□□□□ -0.27
HDAC7-222	ENST00000477937	ACTR5	Q9H9F9	607 aa	Predicted RBP	13.34	□□□□□ -0.27
HDAC7-222	ENST00000477937	SPHK1	Q9NYA1	384 aa		13.34	□□□□□ -0.27
HDAC7-222	ENST00000477937	SNX12	Q9UMY4	172 aa		13.34	□□□□□ -0.27
HDAC7-222	ENST00000477937	FARSA	Q9Y285	508 aa	Known RBP	13.34	□□□□□ -0.27
HDAC7-222	ENST00000477937	VPS9D1	Q9Y2B5	631 aa		13.34	□□□□□ -0.27
HDAC7-222	ENST00000477937	NEU2	Q9Y3R4	380 aa		13.34	□□□□□ -0.27
HDAC7-222	ENST00000477937	FAM237B	A0A1B0GVD1	139 aa		13.33	□□□□□ -0.28
HDAC7-222	ENST00000477937		E7EQ34	232 aa		13.33	□□□□□ -0.28
HDAC7-222	ENST00000477937	GOLGA8M	H3BSY2	632 aa		13.33	□□□□□ -0.28
HDAC7-222	ENST00000477937	MEN1	O00255	615 aa		13.33	□□□□□ -0.28
HDAC7-222	ENST00000477937	TMEM63A	O94886	807 aa		13.33	□□□□□ -0.28
HDAC7-222	ENST00000477937	FURIN	P09958	794 aa		13.33	□□□□□ -0.28
HDAC7-222	ENST00000477937	CD9	P21926	228 aa		13.33	□□□□□ -0.28
HDAC7-222	ENST00000477937	PKLR	P30613	574 aa		13.33	□□□□□ -0.28
HDAC7-222	ENST00000477937	FMO4	P31512	558 aa		13.33	□□□□□ -0.28
HDAC7-222	ENST00000477937	FNTA	P49354	379 aa		13.33	□□□□□ -0.28
HDAC7-222	ENST00000477937	ITGA1	P56199	1179 aa		13.33	□□□□□ -0.28
HDAC7-222	ENST00000477937	DHX34	Q14147	1143 aa	Known RBP	13.33	□□□□□ -0.28
HDAC7-222	ENST00000477937	SLC5A12	Q1EHB4	618 aa		13.33	□□□□□ -0.28
HDAC7-222	ENST00000477937	TYSND1	Q2T9J0	566 aa		13.33	□□□□□ -0.28
HDAC7-222	ENST00000477937	ANKRD20A4	Q4UJ75	823 aa		13.33	□□□□□ -0.28
HDAC7-222	ENST00000477937	PLEKHS1	Q5SXH7	462 aa		13.33	□□□□□ -0.28
HDAC7-222	ENST00000477937	PRAMEF17	Q5VTA0	474 aa		13.33	□□□□□ -0.28
HDAC7-222	ENST00000477937	IZUMO3	Q5VZ72	239 aa		13.33	□□□□□ -0.28
HDAC7-222	ENST00000477937	NEPRO	Q6NW34	567 aa		13.33	□□□□□ -0.28
HDAC7-222	ENST00000477937	ZNF517	Q6ZMY9	492 aa	Predicted RBP	13.33	□□□□□ -0.28
HDAC7-222	ENST00000477937	DSEL	Q8IZU8	1212 aa		13.33	□□□□□ -0.28
HDAC7-222	ENST00000477937	FLVCR1-AS1	Q8TAF5	88 aa		13.33	□□□□□ -0.28
HDAC7-222	ENST00000477937	SKA2	Q8WVK7	121 aa	Predicted RBP	13.33	□□□□□ -0.28
HDAC7-222	ENST00000477937	LPGAT1	Q92604	370 aa		13.33	□□□□□ -0.28
HDAC7-222	ENST00000477937	SLC22A18	Q96BI1	424 aa		13.33	□□□□□ -0.28
HDAC7-222	ENST00000477937	FOPNL	Q96NB1	174 aa		13.33	□□□□□ -0.28
HDAC7-222	ENST00000477937	BIRC8	Q96P09	236 aa		13.33	□□□□□ -0.28
HDAC7-222	ENST00000477937	CHRNA10	Q9GZZ6	450 aa		13.33	□□□□□ -0.28
HDAC7-222	ENST00000477937	SLC39A10	Q9ULF5	831 aa		13.33	□□□□□ -0.28
HDAC7-222	ENST00000477937	CRYL1	Q9Y2S2	319 aa		13.33	□□□□□ -0.28
HDAC7-222	ENST00000477937	MRFAP1	Q9Y605	127 aa		13.33	□□□□□ -0.28
HDAC7-222	ENST00000477937	KCNMB2	Q9Y691	235 aa		13.33	□□□□□ -0.28
HDAC7-222	ENST00000477937	CDC14C	A4D256	554 aa		13.32	□□□□□ -0.28
HDAC7-222	ENST00000477937		J3QKU1	62 aa		13.32	□□□□□ -0.28
HDAC7-222	ENST00000477937	ZNF185	O15231	689 aa		13.32	□□□□□ -0.28
HDAC7-222	ENST00000477937	SLC28A2	O43868	658 aa		13.32	□□□□□ -0.28
HDAC7-222	ENST00000477937	ESR1	P03372	595 aa		13.32	□□□□□ -0.28
HDAC7-222	ENST00000477937	HBQ1	P09105	142 aa		13.32	□□□□□ -0.28
HDAC7-222	ENST00000477937	TCP1	P17987	556 aa	Known RBP	13.32	□□□□□ -0.28
HDAC7-222	ENST00000477937	ADAR	P55265	1226 aa	Known RBP	13.32	□□□□□ -0.28
HDAC7-222	ENST00000477937	THOC5	Q13769	683 aa	Known RBP	13.32	□□□□□ -0.28
HDAC7-222	ENST00000477937	PPP1R7	Q15435	360 aa		13.32	□□□□□ -0.28
HDAC7-222	ENST00000477937	ZIC1	Q15915	447 aa		13.32	□□□□□ -0.28
HDAC7-222	ENST00000477937	ZNF789	Q5FWF6	425 aa		13.32	□□□□□ -0.28
HDAC7-222	ENST00000477937	CTSL3P	Q5NE16	218 aa		13.32	□□□□□ -0.28
HDAC7-222	ENST00000477937	PRICKLE2	Q7Z3G6	844 aa		13.32	□□□□□ -0.28
HDAC7-222	ENST00000477937	SYVN1	Q86TM6	617 aa		13.32	□□□□□ -0.28
HDAC7-222	ENST00000477937	TMEM135	Q86UB9	458 aa		13.32	□□□□□ -0.28
HDAC7-222	ENST00000477937	CILP2	Q8IUL8	1156 aa		13.32	□□□□□ -0.28
HDAC7-222	ENST00000477937	PPIL6	Q8IXY8	311 aa		13.32	□□□□□ -0.28
HDAC7-222	ENST00000477937	NAT8L	Q8N9F0	302 aa		13.32	□□□□□ -0.28
HDAC7-222	ENST00000477937	MAGEC3	Q8TD91	643 aa		13.32	□□□□□ -0.28
HDAC7-222	ENST00000477937	RAD51AP1	Q96B01	352 aa		13.32	□□□□□ -0.28
HDAC7-222	ENST00000477937	ZNF669	Q96BR6	464 aa	Predicted RBP	13.32	□□□□□ -0.28
HDAC7-222	ENST00000477937	SERPINB12	Q96P63	405 aa		13.32	□□□□□ -0.28
HDAC7-222	ENST00000477937	RAB11FIP5	Q9BXF6	653 aa		13.32	□□□□□ -0.28
HDAC7-222	ENST00000477937	CHST8	Q9H2A9	424 aa		13.32	□□□□□ -0.28
HDAC7-222	ENST00000477937	FAM60A	Q9NP50	221 aa		13.32	□□□□□ -0.28
HDAC7-222	ENST00000477937	INTS10	Q9NVR2	710 aa	Known RBP	13.32	□□□□□ -0.28
HDAC7-222	ENST00000477937	AP1M2	Q9Y6Q5	423 aa		13.32	□□□□□ -0.28
HDAC7-222	ENST00000477937		E5RI56	91 aa		13.31	□□□□□ -0.28
HDAC7-222	ENST00000477937	RASGRF2	O14827	1237 aa		13.31	□□□□□ -0.28
HDAC7-222	ENST00000477937	ZNF749	O43361	778 aa		13.31	□□□□□ -0.28
HDAC7-222	ENST00000477937	NIPSNAP2	O75323	286 aa		13.31	□□□□□ -0.28
HDAC7-222	ENST00000477937	OR2B3	O76000	313 aa		13.31	□□□□□ -0.28
HDAC7-222	ENST00000477937	C1orf105	O95561	183 aa		13.31	□□□□□ -0.28
HDAC7-222	ENST00000477937	S1PR4	O95977	384 aa		13.31	□□□□□ -0.28
HDAC7-222	ENST00000477937	RAB40AL	P0C0E4	278 aa		13.31	□□□□□ -0.28
HDAC7-222	ENST00000477937	CHRM3	P20309	590 aa		13.31	□□□□□ -0.28
HDAC7-222	ENST00000477937	PEBP1	P30086	187 aa	Known RBP	13.31	□□□□□ -0.28
HDAC7-222	ENST00000477937	RORA	P35398	523 aa		13.31	□□□□□ -0.28
HDAC7-222	ENST00000477937	CCNF	P41002	786 aa		13.31	□□□□□ -0.28
HDAC7-222	ENST00000477937	RPS18	P62269	152 aa	Known RBP	13.31	□□□□□ -0.28
HDAC7-222	ENST00000477937	GRB7	Q14451	532 aa		13.31	□□□□□ -0.28
HDAC7-222	ENST00000477937	RAB42	Q8N4Z0	105 aa		13.31	□□□□□ -0.28
HDAC7-222	ENST00000477937	C2orf73	Q8N5S3	287 aa	Predicted RBP	13.31	□□□□□ -0.28
HDAC7-222	ENST00000477937	LINC01555	Q8NAE3	123 aa		13.31	□□□□□ -0.28
HDAC7-222	ENST00000477937	OR2L8	Q8NGY9	312 aa		13.31	□□□□□ -0.28
HDAC7-222	ENST00000477937	C9orf43	Q8TAL5	461 aa	Predicted RBP	13.31	□□□□□ -0.28
HDAC7-222	ENST00000477937	THAP4	Q8WY91	577 aa		13.31	□□□□□ -0.28
HDAC7-222	ENST00000477937	RUFY1	Q96T51	708 aa		13.31	□□□□□ -0.28
HDAC7-222	ENST00000477937	DPH2	Q9BQC3	489 aa	Predicted RBP	13.31	□□□□□ -0.28
HDAC7-222	ENST00000477937	TRIM56	Q9BRZ2	755 aa	Known RBP	13.31	□□□□□ -0.28
HDAC7-222	ENST00000477937	MENT	Q9BUN1	341 aa		13.31	□□□□□ -0.28
HDAC7-222	ENST00000477937	NLN	Q9BYT8	704 aa		13.31	□□□□□ -0.28
HDAC7-222	ENST00000477937	PCMTD2	Q9NV79	361 aa		13.31	□□□□□ -0.28
HDAC7-222	ENST00000477937	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	13.31	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms