RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 ACADVLP49748 655 aa14.9□□□□□ -0.02
SEC13-215ENST00000477547 ATP6V0D1P61421 351 aa14.9□□□□□ -0.02
SEC13-215ENST00000477547 DLG1Q12959 904 aa14.9□□□□□ -0.02
SEC13-215ENST00000477547 NR1D2Q14995 579 aa14.9□□□□□ -0.02
SEC13-215ENST00000477547 TSNQ15631 228 aaKnown RBP14.9□□□□□ -0.02
SEC13-215ENST00000477547 TTC23LQ6PF05 361 aa14.9□□□□□ -0.02
SEC13-215ENST00000477547 CYHR1Q6ZMK1 362 aa14.9□□□□□ -0.02
SEC13-215ENST00000477547 FRA10AC1Q70Z53 315 aa14.9□□□□□ -0.02
SEC13-215ENST00000477547 HDXQ7Z353 690 aa14.9□□□□□ -0.02
SEC13-215ENST00000477547 OR52E1Q8NGJ3 308 aa14.9□□□□□ -0.02
SEC13-215ENST00000477547 MAGEC3Q8TD91 643 aa14.9□□□□□ -0.02
SEC13-215ENST00000477547 ACMSDQ8TDX5 336 aa14.9□□□□□ -0.02
SEC13-215ENST00000477547 ASB11Q8WXH4 323 aa14.9□□□□□ -0.02
SEC13-215ENST00000477547 ZMYND15Q9H091 742 aa14.9□□□□□ -0.02
SEC13-215ENST00000477547 CENPHQ9H3R5 247 aa14.9□□□□□ -0.02
SEC13-215ENST00000477547 SYNDIG1Q9H7V2 258 aa14.9□□□□□ -0.02
SEC13-215ENST00000477547 UCK1Q9HA47 277 aa14.9□□□□□ -0.02
SEC13-215ENST00000477547 IGSF5Q9NSI5 407 aa14.9□□□□□ -0.02
SEC13-215ENST00000477547 POLG2Q9UHN1 485 aa14.9□□□□□ -0.02
SEC13-215ENST00000477547 KLK13Q9UKR3 277 aa14.9□□□□□ -0.02
SEC13-215ENST00000477547 PLAGL1Q9UM63 463 aa14.9□□□□□ -0.02
SEC13-215ENST00000477547 LOC400499M0QZD8 3231 aa14.89□□□□□ -0.03
SEC13-215ENST00000477547 A0A1W2PPM1 405 aa14.89□□□□□ -0.03
SEC13-215ENST00000477547 GOLGA6L10A6NI86 522 aa14.89□□□□□ -0.03
SEC13-215ENST00000477547 SLC16A5O15375 505 aa14.89□□□□□ -0.03
SEC13-215ENST00000477547 RGS16O15492 202 aaPredicted RBP14.89□□□□□ -0.03
SEC13-215ENST00000477547 SYF2O95926 243 aaKnown RBP14.89□□□□□ -0.03
SEC13-215ENST00000477547 TFEBP19484 476 aa14.89□□□□□ -0.03
SEC13-215ENST00000477547 PHKG1Q16816 387 aa14.89□□□□□ -0.03
SEC13-215ENST00000477547 FAM83EQ2M2I3 478 aa14.89□□□□□ -0.03
SEC13-215ENST00000477547 TSNAXIP1Q2TAA8 658 aa14.89□□□□□ -0.03
SEC13-215ENST00000477547 CCSMST1Q4G0I0 132 aa14.89□□□□□ -0.03
SEC13-215ENST00000477547 CCDC157Q569K6 752 aa14.89□□□□□ -0.03
SEC13-215ENST00000477547 KLC3Q6P597 504 aa14.89□□□□□ -0.03
SEC13-215ENST00000477547 SBSNQ6UWP8 590 aa14.89□□□□□ -0.03
SEC13-215ENST00000477547 SPRED1Q7Z699 444 aa14.89□□□□□ -0.03
SEC13-215ENST00000477547 RASGRP3Q8IV61 690 aa14.89□□□□□ -0.03
SEC13-215ENST00000477547 SRRM1Q8IYB3 904 aaKnown RBP14.89□□□□□ -0.03
SEC13-215ENST00000477547 ZFPM2Q8WW38 1151 aa14.89□□□□□ -0.03
SEC13-215ENST00000477547 ANKRD7Q92527 254 aa14.89□□□□□ -0.03
SEC13-215ENST00000477547 EXT2Q93063 718 aa14.89□□□□□ -0.03
SEC13-215ENST00000477547 RAD51AP1Q96B01 352 aa14.89□□□□□ -0.03
SEC13-215ENST00000477547 PTERQ96BW5 349 aa14.89□□□□□ -0.03
SEC13-215ENST00000477547 NXNL1Q96CM4 212 aa14.89□□□□□ -0.03
SEC13-215ENST00000477547 CCDC3Q9BQI4 270 aa14.89□□□□□ -0.03
SEC13-215ENST00000477547 TBC1D10AQ9BXI6 508 aa14.89□□□□□ -0.03
SEC13-215ENST00000477547 NMRAL1Q9HBL8 299 aa14.89□□□□□ -0.03
SEC13-215ENST00000477547 KCNK4Q9NYG8 393 aa14.89□□□□□ -0.03
SEC13-215ENST00000477547 ICKQ9UPZ9 632 aa14.89□□□□□ -0.03
SEC13-215ENST00000477547 SETXQ7Z333 2677 aaKnown RBP14.88□□□□□ -0.03
SEC13-215ENST00000477547 ITPR1Q14643 2758 aa14.88□□□□□ -0.03
SEC13-215ENST00000477547 GFYI3L273 518 aa14.88□□□□□ -0.03
SEC13-215ENST00000477547 MYO1CO00159 1063 aa14.88□□□□□ -0.03
SEC13-215ENST00000477547 KLHL2O95198 593 aa14.88□□□□□ -0.03
SEC13-215ENST00000477547 ENO2P09104 434 aaPredicted RBP14.88□□□□□ -0.03
SEC13-215ENST00000477547 PYGBP11216 843 aa14.88□□□□□ -0.03
SEC13-215ENST00000477547 PNLIPP16233 465 aa14.88□□□□□ -0.03
SEC13-215ENST00000477547 PKLRP30613 574 aa14.88□□□□□ -0.03
SEC13-215ENST00000477547 SHMT2P34897 504 aa14.88□□□□□ -0.03
SEC13-215ENST00000477547 GPR3P46089 330 aa14.88□□□□□ -0.03
SEC13-215ENST00000477547 GLRBP48167 497 aa14.88□□□□□ -0.03
SEC13-215ENST00000477547 KPNA2P52292 529 aaKnown RBP14.88□□□□□ -0.03
SEC13-215ENST00000477547 EPHA4P54764 986 aa14.88□□□□□ -0.03
SEC13-215ENST00000477547 SOWAHCQ53LP3 525 aaPredicted RBP14.88□□□□□ -0.03
SEC13-215ENST00000477547 C19orf48Q6RUI8 117 aa14.88□□□□□ -0.03
SEC13-215ENST00000477547 CLEC14AQ86T13 490 aa14.88□□□□□ -0.03
SEC13-215ENST00000477547 TRABD2AQ86V40 505 aa14.88□□□□□ -0.03
SEC13-215ENST00000477547 C4orf33Q8N1A6 199 aa14.88□□□□□ -0.03
SEC13-215ENST00000477547 PLD6Q8N2A8 252 aaKnown RBP14.88□□□□□ -0.03
SEC13-215ENST00000477547 RAB42Q8N4Z0 105 aa14.88□□□□□ -0.03
SEC13-215ENST00000477547 Q8N9G6 341 aaPredicted RBP14.88□□□□□ -0.03
SEC13-215ENST00000477547 FBXO15Q8NCQ5 510 aaPredicted RBP14.88□□□□□ -0.03
SEC13-215ENST00000477547 LCN9Q8WX39 176 aa14.88□□□□□ -0.03
SEC13-215ENST00000477547 DLG3Q92796 817 aa14.88□□□□□ -0.03
SEC13-215ENST00000477547 RAB11FIP5Q9BXF6 653 aa14.88□□□□□ -0.03
SEC13-215ENST00000477547 XKR8Q9H6D3 395 aa14.88□□□□□ -0.03
SEC13-215ENST00000477547 ALG9Q9H6U8 611 aa14.88□□□□□ -0.03
SEC13-215ENST00000477547 PARVBQ9HBI1 364 aa14.88□□□□□ -0.03
SEC13-215ENST00000477547 UTP6Q9NYH9 597 aaKnown RBP14.88□□□□□ -0.03
SEC13-215ENST00000477547 SPATA7Q9P0W8 599 aa14.88□□□□□ -0.03
SEC13-215ENST00000477547 PDE10AQ9Y233 779 aa14.88□□□□□ -0.03
SEC13-215ENST00000477547 NEUROG3Q9Y4Z2 214 aa14.88□□□□□ -0.03
SEC13-215ENST00000477547 FREM2Q5SZK8 3169 aa14.87□□□□□ -0.03
SEC13-215ENST00000477547 GCN1Q92616 2671 aaKnown RBP14.87□□□□□ -0.03
SEC13-215ENST00000477547 DUX1O43812 170 aa14.87□□□□□ -0.03
SEC13-215ENST00000477547 RFPL3O75679 317 aa14.87□□□□□ -0.03
SEC13-215ENST00000477547 RPLP0P05388 317 aaKnown RBP14.87□□□□□ -0.03
SEC13-215ENST00000477547 GP1BAP07359 652 aa14.87□□□□□ -0.03
SEC13-215ENST00000477547 MYZAPP0CAP1 466 aa14.87□□□□□ -0.03
SEC13-215ENST00000477547 COL6A2P12110 1019 aa14.87□□□□□ -0.03
SEC13-215ENST00000477547 ALDH4A1P30038 563 aa14.87□□□□□ -0.03
SEC13-215ENST00000477547 OR1D5P58170 312 aa14.87□□□□□ -0.03
SEC13-215ENST00000477547 GRB7Q14451 532 aa14.87□□□□□ -0.03
SEC13-215ENST00000477547 OR4D1Q15615 310 aa14.87□□□□□ -0.03
SEC13-215ENST00000477547 TRIP6Q15654 476 aaKnown RBP14.87□□□□□ -0.03
SEC13-215ENST00000477547 PPP1R3AQ16821 1122 aa14.87□□□□□ -0.03
SEC13-215ENST00000477547 MBOAT1Q6ZNC8 495 aa14.87□□□□□ -0.03
SEC13-215ENST00000477547 GLRX5Q86SX6 157 aa14.87□□□□□ -0.03
SEC13-215ENST00000477547 OR9A1PQ8NGU1 263 aa14.87□□□□□ -0.03
SEC13-215ENST00000477547 OR10G6Q8NH81 332 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms