RNA–Protein interactions for RNA: ENST00000476964.5

SOX2-OT-207, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 606 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-207ENST00000476964 CTAGE4Q8IX94 777 aa4.28□□□□□ -1.72
SOX2-OT-207ENST00000476964 PM20D2Q8IYS1 436 aa4.28□□□□□ -1.72
SOX2-OT-207ENST00000476964 LMNTD1Q8N9Z9 388 aa4.28□□□□□ -1.72
SOX2-OT-207ENST00000476964 SLC38A9Q8NBW4 561 aa4.28□□□□□ -1.72
SOX2-OT-207ENST00000476964 BBS10Q8TAM1 723 aa4.28□□□□□ -1.72
SOX2-OT-207ENST00000476964 SLC44A1Q8WWI5 657 aa4.28□□□□□ -1.72
SOX2-OT-207ENST00000476964 DNAAF4Q8WXU2 420 aa4.28□□□□□ -1.72
SOX2-OT-207ENST00000476964 BSCL2Q96G97 398 aaPredicted RBP4.28□□□□□ -1.72
SOX2-OT-207ENST00000476964 SFXN2Q96NB2 322 aa4.28□□□□□ -1.72
SOX2-OT-207ENST00000476964 PARK7Q99497 189 aaKnown RBP4.28□□□□□ -1.72
SOX2-OT-207ENST00000476964 C16orf70Q9BSU1 422 aa4.28□□□□□ -1.72
SOX2-OT-207ENST00000476964 INPP5KQ9BT40 448 aa4.28□□□□□ -1.72
SOX2-OT-207ENST00000476964 TRMT61BQ9BVS5 477 aaKnown RBP4.28□□□□□ -1.72
SOX2-OT-207ENST00000476964 GTPBP2Q9BX10 602 aaKnown RBP4.28□□□□□ -1.72
SOX2-OT-207ENST00000476964 WNT5BQ9H1J7 359 aa4.28□□□□□ -1.72
SOX2-OT-207ENST00000476964 ZFP57Q9NU63 452 aa4.28□□□□□ -1.72
SOX2-OT-207ENST00000476964 MOSPD1Q9UJG1 213 aa4.28□□□□□ -1.72
SOX2-OT-207ENST00000476964 LIPT1Q9Y234 373 aa4.28□□□□□ -1.72
SOX2-OT-207ENST00000476964 TMEM184BQ9Y519 407 aaPredicted RBP4.28□□□□□ -1.72
SOX2-OT-207ENST00000476964 ASTN2O75129 1339 aaPredicted RBP4.27□□□□□ -1.73
SOX2-OT-207ENST00000476964 PTPRCP08575 1304 aa4.27□□□□□ -1.73
SOX2-OT-207ENST00000476964 A0A087WV48 116 aa4.27□□□□□ -1.73
SOX2-OT-207ENST00000476964 A0A1W2PRV1 198 aa4.27□□□□□ -1.73
SOX2-OT-207ENST00000476964 CLDN4O14493 209 aa4.27□□□□□ -1.73
SOX2-OT-207ENST00000476964 IFIT3O14879 490 aaKnown RBP4.27□□□□□ -1.73
SOX2-OT-207ENST00000476964 HTATSF1O43719 755 aaKnown RBP4.27□□□□□ -1.73
SOX2-OT-207ENST00000476964 SIX3O95343 332 aaPredicted RBP4.27□□□□□ -1.73
SOX2-OT-207ENST00000476964 ACSL3O95573 720 aa4.27□□□□□ -1.73
SOX2-OT-207ENST00000476964 HMOX1P09601 288 aa4.27□□□□□ -1.73
SOX2-OT-207ENST00000476964 ADRA2CP18825 462 aa4.27□□□□□ -1.73
SOX2-OT-207ENST00000476964 GNAZP19086 355 aa4.27□□□□□ -1.73
SOX2-OT-207ENST00000476964 KCNA5P22460 613 aa4.27□□□□□ -1.73
SOX2-OT-207ENST00000476964 ANOS1P23352 680 aa4.27□□□□□ -1.73
SOX2-OT-207ENST00000476964 EEF1A1P68104 462 aaKnown RBP4.27□□□□□ -1.73
SOX2-OT-207ENST00000476964 PITX1P78337 314 aaPredicted RBP4.27□□□□□ -1.73
SOX2-OT-207ENST00000476964 GTF2H2Q13888 395 aa4.27□□□□□ -1.73
SOX2-OT-207ENST00000476964 ZNF234Q14588 700 aa4.27□□□□□ -1.73
SOX2-OT-207ENST00000476964 NR1D2Q14995 579 aa4.27□□□□□ -1.73
SOX2-OT-207ENST00000476964 RBBP5Q15291 538 aaKnown RBP4.27□□□□□ -1.73
SOX2-OT-207ENST00000476964 KRTCAP3Q53RY4 240 aa4.27□□□□□ -1.73
SOX2-OT-207ENST00000476964 EEF1A1P5Q5VTE0 462 aa4.27□□□□□ -1.73
SOX2-OT-207ENST00000476964 GTF2H2CQ6P1K8 395 aa4.27□□□□□ -1.73
SOX2-OT-207ENST00000476964 FAM198BQ6UWH4 519 aa4.27□□□□□ -1.73
SOX2-OT-207ENST00000476964 GDPD4Q6W3E5 623 aa4.27□□□□□ -1.73
SOX2-OT-207ENST00000476964 MARK2Q7KZI7 788 aaKnown RBP4.27□□□□□ -1.73
SOX2-OT-207ENST00000476964 DCUN1D3Q8IWE4 304 aa4.27□□□□□ -1.73
SOX2-OT-207ENST00000476964 MAML2Q8IZL2 1156 aaPredicted RBP4.27□□□□□ -1.73
SOX2-OT-207ENST00000476964 GCSAMQ8N6F7 178 aa4.27□□□□□ -1.73
SOX2-OT-207ENST00000476964 PPP4R1Q8TF05 950 aa4.27□□□□□ -1.73
SOX2-OT-207ENST00000476964 ATL1Q8WXF7 558 aa4.27□□□□□ -1.73
SOX2-OT-207ENST00000476964 NSMAFQ92636 917 aa4.27□□□□□ -1.73
SOX2-OT-207ENST00000476964 AK8Q96MA6 479 aa4.27□□□□□ -1.73
SOX2-OT-207ENST00000476964 QRFPRQ96P65 431 aa4.27□□□□□ -1.73
SOX2-OT-207ENST00000476964 PGLYRP2Q96PD5 576 aa4.27□□□□□ -1.73
SOX2-OT-207ENST00000476964 SLC5A7Q9GZV3 580 aa4.27□□□□□ -1.73
SOX2-OT-207ENST00000476964 DPAGT1Q9H3H5 408 aa4.27□□□□□ -1.73
SOX2-OT-207ENST00000476964 HHATLQ9HCP6 504 aa4.27□□□□□ -1.73
SOX2-OT-207ENST00000476964 IL1RAPL2Q9NP60 686 aa4.27□□□□□ -1.73
SOX2-OT-207ENST00000476964 ERAP1Q9NZ08 941 aa4.27□□□□□ -1.73
SOX2-OT-207ENST00000476964 AKAP7Q9P0M2 348 aaPredicted RBP4.27□□□□□ -1.73
SOX2-OT-207ENST00000476964 RCC2Q9P258 522 aaKnown RBP4.27□□□□□ -1.73
SOX2-OT-207ENST00000476964 RHCGQ9UBD6 479 aa4.27□□□□□ -1.73
SOX2-OT-207ENST00000476964 CACNG4Q9UBN1 327 aa4.27□□□□□ -1.73
SOX2-OT-207ENST00000476964 ITGA11Q9UKX5 1188 aa4.27□□□□□ -1.73
SOX2-OT-207ENST00000476964 CDH7Q9ULB5 785 aa4.27□□□□□ -1.73
SOX2-OT-207ENST00000476964 PADI2Q9Y2J8 665 aa4.27□□□□□ -1.73
SOX2-OT-207ENST00000476964 OR2W1Q9Y3N9 320 aa4.27□□□□□ -1.73
SOX2-OT-207ENST00000476964 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.26□□□□□ -1.73
SOX2-OT-207ENST00000476964 FAM172BPA6NC97 362 aa4.26□□□□□ -1.73
SOX2-OT-207ENST00000476964 OOEPA6NGQ2 149 aa4.26□□□□□ -1.73
SOX2-OT-207ENST00000476964 P2RY10O00398 339 aa4.26□□□□□ -1.73
SOX2-OT-207ENST00000476964 SLC33A1O00400 549 aaPredicted RBP4.26□□□□□ -1.73
SOX2-OT-207ENST00000476964 MED24O75448 989 aa4.26□□□□□ -1.73
SOX2-OT-207ENST00000476964 CRYAAP02489 173 aa4.26□□□□□ -1.73
SOX2-OT-207ENST00000476964 RLN1P04808 185 aa4.26□□□□□ -1.73
SOX2-OT-207ENST00000476964 RAB40ALP0C0E4 278 aa4.26□□□□□ -1.73
SOX2-OT-207ENST00000476964 DANCRP0C864 163 aa4.26□□□□□ -1.73
SOX2-OT-207ENST00000476964 P4HA1P13674 534 aa4.26□□□□□ -1.73
SOX2-OT-207ENST00000476964 PSMA3P25788 255 aa4.26□□□□□ -1.73
SOX2-OT-207ENST00000476964 MARK3P27448 753 aa4.26□□□□□ -1.73
SOX2-OT-207ENST00000476964 SOAT1P35610 550 aa4.26□□□□□ -1.73
SOX2-OT-207ENST00000476964 IL15P40933 162 aaPredicted RBP4.26□□□□□ -1.73
SOX2-OT-207ENST00000476964 CLK1P49759 484 aaKnown RBP4.26□□□□□ -1.73
SOX2-OT-207ENST00000476964 LIMK1P53667 647 aa4.26□□□□□ -1.73
SOX2-OT-207ENST00000476964 NAGLUP54802 743 aa4.26□□□□□ -1.73
SOX2-OT-207ENST00000476964 COG7P83436 770 aa4.26□□□□□ -1.73
SOX2-OT-207ENST00000476964 RUNX1T1Q06455 604 aa4.26□□□□□ -1.73
SOX2-OT-207ENST00000476964 ITGA7Q13683 1181 aa4.26□□□□□ -1.73
SOX2-OT-207ENST00000476964 PKN2Q16513 984 aaKnown RBP4.26□□□□□ -1.73
SOX2-OT-207ENST00000476964 GFI1BQ5VTD9 330 aa4.26□□□□□ -1.73
SOX2-OT-207ENST00000476964 TMEM270Q6UE05 265 aa4.26□□□□□ -1.73
SOX2-OT-207ENST00000476964 ATG9AQ7Z3C6 839 aa4.26□□□□□ -1.73
SOX2-OT-207ENST00000476964 NFE4Q86UQ8 179 aa4.26□□□□□ -1.73
SOX2-OT-207ENST00000476964 MAP7D3Q8IWC1 876 aa4.26□□□□□ -1.73
SOX2-OT-207ENST00000476964 TIGD4Q8IY51 512 aa4.26□□□□□ -1.73
SOX2-OT-207ENST00000476964 ANKRD13CQ8N6S4 541 aa4.26□□□□□ -1.73
SOX2-OT-207ENST00000476964 UXS1Q8NBZ7 420 aa4.26□□□□□ -1.73
SOX2-OT-207ENST00000476964 HEXDCQ8WVB3 486 aa4.26□□□□□ -1.73
SOX2-OT-207ENST00000476964 ATP6V0A1Q93050 837 aa4.26□□□□□ -1.73
SOX2-OT-207ENST00000476964 ST6GALNAC6Q969X2 333 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms