RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 UTP11Q9Y3A2 253 aaKnown RBP12.05□□□□□ -0.48
APTX-220ENST00000476858 HEBP2Q9Y5Z4 205 aa12.05□□□□□ -0.48
APTX-220ENST00000476858 TMX2-CTNND1H3BSU7 103 aa12.04□□□□□ -0.48
APTX-220ENST00000476858 SMAPO00193 183 aa12.04□□□□□ -0.48
APTX-220ENST00000476858 ZW10O43264 779 aa12.04□□□□□ -0.48
APTX-220ENST00000476858 MATN4O95460 622 aa12.04□□□□□ -0.48
APTX-220ENST00000476858 CHRM5P08912 532 aaPredicted RBP12.04□□□□□ -0.48
APTX-220ENST00000476858 UGT2B7P16662 529 aa12.04□□□□□ -0.48
APTX-220ENST00000476858 NELFEP18615 380 aaKnown RBP12.04□□□□□ -0.48
APTX-220ENST00000476858 PRDX3P30048 256 aaKnown RBP12.04□□□□□ -0.48
APTX-220ENST00000476858 ERVPABLB-1P60509 514 aa12.04□□□□□ -0.48
APTX-220ENST00000476858 MGAT5Q09328 741 aa12.04□□□□□ -0.48
APTX-220ENST00000476858 CALCOCO2Q13137 446 aa12.04□□□□□ -0.48
APTX-220ENST00000476858 EIF3IQ13347 325 aaKnown RBP12.04□□□□□ -0.48
APTX-220ENST00000476858 TMED2Q15363 201 aa12.04□□□□□ -0.48
APTX-220ENST00000476858 COL28A1Q2UY09 1125 aa12.04□□□□□ -0.48
APTX-220ENST00000476858 PAQR3Q6TCH7 311 aa12.04□□□□□ -0.48
APTX-220ENST00000476858 VASH2Q86V25 355 aa12.04□□□□□ -0.48
APTX-220ENST00000476858 KIF18AQ8NI77 898 aa12.04□□□□□ -0.48
APTX-220ENST00000476858 GSDMBQ8TAX9 411 aa12.04□□□□□ -0.48
APTX-220ENST00000476858 EEF1AKMT1Q8WVE0 214 aa12.04□□□□□ -0.48
APTX-220ENST00000476858 SKA2Q8WVK7 121 aaPredicted RBP12.04□□□□□ -0.48
APTX-220ENST00000476858 SLC41A2Q96JW4 573 aa12.04□□□□□ -0.48
APTX-220ENST00000476858 OR6C1Q96RD1 312 aa12.04□□□□□ -0.48
APTX-220ENST00000476858 DPYSL5Q9BPU6 564 aa12.04□□□□□ -0.48
APTX-220ENST00000476858 NAT9Q9BTE0 207 aa12.04□□□□□ -0.48
APTX-220ENST00000476858 RAB17Q9H0T7 212 aa12.04□□□□□ -0.48
APTX-220ENST00000476858 AKIRIN1Q9H9L7 192 aaPredicted RBP12.04□□□□□ -0.48
APTX-220ENST00000476858 FAM60AQ9NP50 221 aa12.04□□□□□ -0.48
APTX-220ENST00000476858 THSD1Q9NS62 852 aa12.04□□□□□ -0.48
APTX-220ENST00000476858 DHRS7Q9Y394 339 aa12.04□□□□□ -0.48
APTX-220ENST00000476858 PCDHGA7Q9Y5G6 932 aa12.04□□□□□ -0.48
APTX-220ENST00000476858 A0A087WV48 116 aa12.03□□□□□ -0.48
APTX-220ENST00000476858 A0A1W2PPV9 198 aa12.03□□□□□ -0.48
APTX-220ENST00000476858 TCRBV9S1A1TA0A576 114 aa12.03□□□□□ -0.48
APTX-220ENST00000476858 TLCD2A6NGC4 264 aa12.03□□□□□ -0.48
APTX-220ENST00000476858 B4E171 279 aa12.03□□□□□ -0.48
APTX-220ENST00000476858 E5RI56 91 aa12.03□□□□□ -0.48
APTX-220ENST00000476858 NVLO15381 856 aaKnown RBP12.03□□□□□ -0.48
APTX-220ENST00000476858 TSPAN12O95859 305 aa12.03□□□□□ -0.48
APTX-220ENST00000476858 TSPAN7P41732 249 aa12.03□□□□□ -0.48
APTX-220ENST00000476858 MAGEA4P43358 317 aa12.03□□□□□ -0.48
APTX-220ENST00000476858 PCBP4P57723 403 aaKnown RBP12.03□□□□□ -0.48
APTX-220ENST00000476858 TLE3Q04726 772 aa12.03□□□□□ -0.48
APTX-220ENST00000476858 FOXM1Q08050 763 aa12.03□□□□□ -0.48
APTX-220ENST00000476858 FRG1Q14331 258 aaKnown RBP12.03□□□□□ -0.48
APTX-220ENST00000476858 DEFB110Q30KQ9 67 aa12.03□□□□□ -0.48
APTX-220ENST00000476858 HECTD2Q5U5R9 776 aa12.03□□□□□ -0.48
APTX-220ENST00000476858 ZNF449Q6P9G9 518 aa12.03□□□□□ -0.48
APTX-220ENST00000476858 UNC5DQ6UXZ4 953 aa12.03□□□□□ -0.48
APTX-220ENST00000476858 MBOAT1Q6ZNC8 495 aa12.03□□□□□ -0.48
APTX-220ENST00000476858 STRA8Q7Z7C7 330 aa12.03□□□□□ -0.48
APTX-220ENST00000476858 ZC3HC1Q86WB0 502 aaKnown RBP12.03□□□□□ -0.48
APTX-220ENST00000476858 LSMEM2Q8N112 164 aa12.03□□□□□ -0.48
APTX-220ENST00000476858 GPATCH11Q8N954 259 aa12.03□□□□□ -0.48
APTX-220ENST00000476858 BBOF1Q8ND07 529 aa12.03□□□□□ -0.48
APTX-220ENST00000476858 PPFIBP2Q8ND30 876 aa12.03□□□□□ -0.48
APTX-220ENST00000476858 CALML6Q8TD86 181 aa12.03□□□□□ -0.48
APTX-220ENST00000476858 PYROXD1Q8WU10 500 aa12.03□□□□□ -0.48
APTX-220ENST00000476858 KCNJ9Q92806 393 aa12.03□□□□□ -0.48
APTX-220ENST00000476858 ZDHHC12Q96GR4 267 aa12.03□□□□□ -0.48
APTX-220ENST00000476858 TRAPPC9Q96Q05 1148 aa12.03□□□□□ -0.48
APTX-220ENST00000476858 TAAR9Q96RI9 348 aa12.03□□□□□ -0.48
APTX-220ENST00000476858 PKP4Q99569 1192 aa12.03□□□□□ -0.48
APTX-220ENST00000476858 TSSK1BQ9BXA7 367 aa12.03□□□□□ -0.48
APTX-220ENST00000476858 SYNPO2LQ9H987 977 aa12.03□□□□□ -0.48
APTX-220ENST00000476858 CAB39LQ9H9S4 337 aa12.03□□□□□ -0.48
APTX-220ENST00000476858 CPNE5Q9HCH3 593 aa12.03□□□□□ -0.48
APTX-220ENST00000476858 LRRC4CQ9HCJ2 640 aa12.03□□□□□ -0.48
APTX-220ENST00000476858 MTO1Q9Y2Z2 717 aaKnown RBP12.03□□□□□ -0.48
APTX-220ENST00000476858 SNRNP200O75643 2136 aaKnown RBP12.02□□□□□ -0.48
APTX-220ENST00000476858 URB1O60287 2271 aaKnown RBP12.02□□□□□ -0.49
APTX-220ENST00000476858 PIPSLA2A3N6 862 aa12.02□□□□□ -0.49
APTX-220ENST00000476858 CTAGE15A4D2H0 777 aa12.02□□□□□ -0.49
APTX-220ENST00000476858 H3BMM5 538 aa12.02□□□□□ -0.49
APTX-220ENST00000476858 KLK10O43240 276 aa12.02□□□□□ -0.49
APTX-220ENST00000476858 PRICKLE3O43900 615 aaPredicted RBP12.02□□□□□ -0.49
APTX-220ENST00000476858 PSIP1O75475 530 aaKnown RBP12.02□□□□□ -0.49
APTX-220ENST00000476858 CTAGE8P0CG41 777 aa12.02□□□□□ -0.49
APTX-220ENST00000476858 SAT1P21673 171 aa12.02□□□□□ -0.49
APTX-220ENST00000476858 CDH3P22223 829 aa12.02□□□□□ -0.49
APTX-220ENST00000476858 FDXRP22570 491 aa12.02□□□□□ -0.49
APTX-220ENST00000476858 PLOD1Q02809 727 aaPredicted RBP12.02□□□□□ -0.49
APTX-220ENST00000476858 ZXDCQ2QGD7 858 aaPredicted RBP12.02□□□□□ -0.49
APTX-220ENST00000476858 ADGRD1Q6QNK2 874 aa12.02□□□□□ -0.49
APTX-220ENST00000476858 SPESP1Q6UW49 350 aa12.02□□□□□ -0.49
APTX-220ENST00000476858 CDHR3Q6ZTQ4 885 aa12.02□□□□□ -0.49
APTX-220ENST00000476858 CTAGE6Q86UF2 777 aa12.02□□□□□ -0.49
APTX-220ENST00000476858 DTX1Q86Y01 620 aa12.02□□□□□ -0.49
APTX-220ENST00000476858 CEP97Q8IW35 865 aa12.02□□□□□ -0.49
APTX-220ENST00000476858 DCUN1D3Q8IWE4 304 aa12.02□□□□□ -0.49
APTX-220ENST00000476858 CTAGE4Q8IX94 777 aa12.02□□□□□ -0.49
APTX-220ENST00000476858 LMNTD2Q8IXW0 634 aa12.02□□□□□ -0.49
APTX-220ENST00000476858 KCNE4Q8WWG9 221 aa12.02□□□□□ -0.49
APTX-220ENST00000476858 INPP5DQ92835 1189 aa12.02□□□□□ -0.49
APTX-220ENST00000476858 PITPNM3Q9BZ71 974 aa12.02□□□□□ -0.49
APTX-220ENST00000476858 UNKQ9C0B0 810 aaKnown RBP12.02□□□□□ -0.49
APTX-220ENST00000476858 FBXO8Q9NRD0 319 aa12.02□□□□□ -0.49
APTX-220ENST00000476858 WDR70Q9NW82 654 aa12.02□□□□□ -0.49
APTX-220ENST00000476858 NINJ2Q9NZG7 142 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms