RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 DENND1AQ8TEH3 1009 aa9.39□□□□□ -0.91
HDAC3-208ENST00000476739 IFT81Q8WYA0 676 aa9.39□□□□□ -0.91
HDAC3-208ENST00000476739 INPP5DQ92835 1189 aa9.39□□□□□ -0.91
HDAC3-208ENST00000476739 SLC41A2Q96JW4 573 aa9.39□□□□□ -0.91
HDAC3-208ENST00000476739 DCBLD2Q96PD2 775 aa9.39□□□□□ -0.91
HDAC3-208ENST00000476739 OR2A14Q96R47 310 aa9.39□□□□□ -0.91
HDAC3-208ENST00000476739 PHACTR1Q9C0D0 580 aa9.39□□□□□ -0.91
HDAC3-208ENST00000476739 FAM114A2Q9NRY5 505 aa9.39□□□□□ -0.91
HDAC3-208ENST00000476739 THSD1Q9NS62 852 aa9.39□□□□□ -0.91
HDAC3-208ENST00000476739 SLC39A1Q9NY26 324 aa9.39□□□□□ -0.91
HDAC3-208ENST00000476739 ACTR10Q9NZ32 417 aa9.39□□□□□ -0.91
HDAC3-208ENST00000476739 ZFATQ9P243 1243 aa9.39□□□□□ -0.91
HDAC3-208ENST00000476739 POLG2Q9UHN1 485 aa9.39□□□□□ -0.91
HDAC3-208ENST00000476739 POMT2Q9UKY4 750 aa9.39□□□□□ -0.91
HDAC3-208ENST00000476739 B3GALT1Q9Y5Z6 326 aa9.39□□□□□ -0.91
HDAC3-208ENST00000476739 COMMD10Q9Y6G5 202 aa9.39□□□□□ -0.91
HDAC3-208ENST00000476739 ACACAQ13085 2346 aa9.39□□□□□ -0.91
HDAC3-208ENST00000476739 ZFHX4Q86UP3 3567 aa9.39□□□□□ -0.91
HDAC3-208ENST00000476739 TLCD2A6NGC4 264 aa9.38□□□□□ -0.91
HDAC3-208ENST00000476739 SLC9B1P1A6NJY1 282 aa9.38□□□□□ -0.91
HDAC3-208ENST00000476739 FAM159BA6NKW6 160 aa9.38□□□□□ -0.91
HDAC3-208ENST00000476739 NVLO15381 856 aaKnown RBP9.38□□□□□ -0.91
HDAC3-208ENST00000476739 TOX3O15405 576 aaPredicted RBP9.38□□□□□ -0.91
HDAC3-208ENST00000476739 HCRTR1O43613 425 aa9.38□□□□□ -0.91
HDAC3-208ENST00000476739 PSIP1O75475 530 aaKnown RBP9.38□□□□□ -0.91
HDAC3-208ENST00000476739 FAM155BO75949 473 aa9.38□□□□□ -0.91
HDAC3-208ENST00000476739 TSPAN12O95859 305 aa9.38□□□□□ -0.91
HDAC3-208ENST00000476739 RHOXF2BP0C7M4 288 aa9.38□□□□□ -0.91
HDAC3-208ENST00000476739 EBLN1P0CF75 366 aa9.38□□□□□ -0.91
HDAC3-208ENST00000476739 FOLR1P15328 257 aa9.38□□□□□ -0.91
HDAC3-208ENST00000476739 ST6GAL1P15907 406 aa9.38□□□□□ -0.91
HDAC3-208ENST00000476739 UGT2B7P16662 529 aa9.38□□□□□ -0.91
HDAC3-208ENST00000476739 NELFEP18615 380 aaKnown RBP9.38□□□□□ -0.91
HDAC3-208ENST00000476739 CD9P21926 228 aa9.38□□□□□ -0.91
HDAC3-208ENST00000476739 FDXRP22570 491 aa9.38□□□□□ -0.91
HDAC3-208ENST00000476739 ITPKBP27987 946 aa9.38□□□□□ -0.91
HDAC3-208ENST00000476739 SHMT2P34897 504 aa9.38□□□□□ -0.91
HDAC3-208ENST00000476739 RAB28P51157 221 aa9.38□□□□□ -0.91
HDAC3-208ENST00000476739 FOXM1Q08050 763 aa9.38□□□□□ -0.91
HDAC3-208ENST00000476739 PRKAA1Q13131 559 aa9.38□□□□□ -0.91
HDAC3-208ENST00000476739 SRSF6Q13247 344 aaKnown RBP9.38□□□□□ -0.91
HDAC3-208ENST00000476739 FASTKQ14296 549 aaKnown RBP9.38□□□□□ -0.91
HDAC3-208ENST00000476739 ZNF460Q14592 562 aa9.38□□□□□ -0.91
HDAC3-208ENST00000476739 EFTUD2Q15029 972 aaKnown RBP eCLIP9.38□□□□□ -0.917e-11■■■□□ 17.5
HDAC3-208ENST00000476739 TGIF1Q15583 401 aa9.38□□□□□ -0.91
HDAC3-208ENST00000476739 KBTBD12Q3ZCT8 623 aa9.38□□□□□ -0.91
HDAC3-208ENST00000476739 GLE1Q53GS7 698 aaKnown RBP9.38□□□□□ -0.91
HDAC3-208ENST00000476739 ARMC6Q6NXE6 501 aa9.38□□□□□ -0.91
HDAC3-208ENST00000476739 SPESP1Q6UW49 350 aa9.38□□□□□ -0.91
HDAC3-208ENST00000476739 SLC26A11Q86WA9 606 aa9.38□□□□□ -0.91
HDAC3-208ENST00000476739 RASGRP3Q8IV61 690 aa9.38□□□□□ -0.91
HDAC3-208ENST00000476739 FBF1Q8TES7 1133 aa9.38□□□□□ -0.91
HDAC3-208ENST00000476739 EEF1AKMT1Q8WVE0 214 aa9.38□□□□□ -0.91
HDAC3-208ENST00000476739 DLG3Q92796 817 aa9.38□□□□□ -0.91
HDAC3-208ENST00000476739 ELMO2Q96JJ3 720 aa9.38□□□□□ -0.91
HDAC3-208ENST00000476739 TAAR9Q96RI9 348 aa9.38□□□□□ -0.91
HDAC3-208ENST00000476739 RHOXF2Q9BQY4 288 aa9.38□□□□□ -0.91
HDAC3-208ENST00000476739 L2HGDHQ9H9P8 463 aa9.38□□□□□ -0.91
HDAC3-208ENST00000476739 AKAP7Q9P0M2 348 aaPredicted RBP9.38□□□□□ -0.91
HDAC3-208ENST00000476739 KLHL42Q9P2K6 505 aa9.38□□□□□ -0.91
HDAC3-208ENST00000476739 ADAMTS6Q9UKP5 1117 aa9.38□□□□□ -0.91
HDAC3-208ENST00000476739 IKZF3Q9UKT9 509 aa9.38□□□□□ -0.91
HDAC3-208ENST00000476739 KLHL20Q9Y2M5 609 aa9.38□□□□□ -0.91
HDAC3-208ENST00000476739 PCDHGA7Q9Y5G6 932 aa9.38□□□□□ -0.91
HDAC3-208ENST00000476739 LAMA5O15230 3695 aa9.37□□□□□ -0.91
HDAC3-208ENST00000476739 FAM95CA0A1B0GW59 222 aa9.37□□□□□ -0.91
HDAC3-208ENST00000476739 PIPSLA2A3N6 862 aa9.37□□□□□ -0.91
HDAC3-208ENST00000476739 C2orf74A8MZ97 194 aa9.37□□□□□ -0.91
HDAC3-208ENST00000476739 ISM1B1AKI9 464 aa9.37□□□□□ -0.91
HDAC3-208ENST00000476739 RASGRF2O14827 1237 aa9.37□□□□□ -0.91
HDAC3-208ENST00000476739 TIAF1O95411 115 aa9.37□□□□□ -0.91
HDAC3-208ENST00000476739 MPC1LP0DKB6 136 aa9.37□□□□□ -0.91
HDAC3-208ENST00000476739 ZNF28P17035 718 aa9.37□□□□□ -0.91
HDAC3-208ENST00000476739 SAT1P21673 171 aa9.37□□□□□ -0.91
HDAC3-208ENST00000476739 CDH3P22223 829 aa9.37□□□□□ -0.91
HDAC3-208ENST00000476739 PSMB5P28074 263 aa9.37□□□□□ -0.91
HDAC3-208ENST00000476739 MLLT3P42568 568 aaPredicted RBP9.37□□□□□ -0.91
HDAC3-208ENST00000476739 PCBP4P57723 403 aaKnown RBP9.37□□□□□ -0.91
HDAC3-208ENST00000476739 TAS2R39P59534 338 aa9.37□□□□□ -0.91
HDAC3-208ENST00000476739 YBX1P67809 324 aaKnown RBP9.37□□□□□ -0.91
HDAC3-208ENST00000476739 CLN3Q13286 438 aa9.37□□□□□ -0.91
HDAC3-208ENST00000476739 COL9A2Q14055 689 aaPredicted RBP9.37□□□□□ -0.91
HDAC3-208ENST00000476739 GPR19Q15760 415 aa9.37□□□□□ -0.91
HDAC3-208ENST00000476739 ZIC1Q15915 447 aa9.37□□□□□ -0.91
HDAC3-208ENST00000476739 TTLL9Q3SXZ7 439 aa9.37□□□□□ -0.91
HDAC3-208ENST00000476739 FAM45BPQ6NSW5 357 aa9.37□□□□□ -0.91
HDAC3-208ENST00000476739 NEK10Q6ZWH5 1172 aa9.37□□□□□ -0.91
HDAC3-208ENST00000476739 CYS1Q717R9 158 aa9.37□□□□□ -0.91
HDAC3-208ENST00000476739 CEP97Q8IW35 865 aa9.37□□□□□ -0.91
HDAC3-208ENST00000476739 D2HGDHQ8N465 521 aa9.37□□□□□ -0.91
HDAC3-208ENST00000476739 PPFIBP2Q8ND30 876 aa9.37□□□□□ -0.91
HDAC3-208ENST00000476739 OR2L8Q8NGY9 312 aa9.37□□□□□ -0.91
HDAC3-208ENST00000476739 GABPB2Q8TAK5 448 aaPredicted RBP9.37□□□□□ -0.91
HDAC3-208ENST00000476739 FAM45AQ8TCE6 357 aa9.37□□□□□ -0.91
HDAC3-208ENST00000476739 HNRNPLLQ8WVV9 542 aaKnown RBP9.37□□□□□ -0.91
HDAC3-208ENST00000476739 ASB11Q8WXH4 323 aa9.37□□□□□ -0.91
HDAC3-208ENST00000476739 UBXN4Q92575 508 aa9.37□□□□□ -0.91
HDAC3-208ENST00000476739 RAD51AP1Q96B01 352 aa9.37□□□□□ -0.91
HDAC3-208ENST00000476739 CRELD1Q96HD1 420 aa9.37□□□□□ -0.91
HDAC3-208ENST00000476739 VPS39Q96JC1 886 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms