RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 TYSND1Q2T9J0 566 aa15.68■□□□□ 0.1
COL1A1-205ENST00000476387 ANKRD20A4Q4UJ75 823 aa15.68■□□□□ 0.1
COL1A1-205ENST00000476387 OTOAQ7RTW8 1153 aa15.68■□□□□ 0.1
COL1A1-205ENST00000476387 PCGF5Q86SE9 256 aa15.68■□□□□ 0.1
COL1A1-205ENST00000476387 HOOK3Q86VS8 718 aa15.68■□□□□ 0.1
COL1A1-205ENST00000476387 KLHL7Q8IXQ5 586 aa15.68■□□□□ 0.1
COL1A1-205ENST00000476387 OR5K2Q8NHB8 316 aa15.68■□□□□ 0.1
COL1A1-205ENST00000476387 ZNF501Q96CX3 271 aaPredicted RBP15.68■□□□□ 0.1
COL1A1-205ENST00000476387 LRFN5Q96NI6 719 aa15.68■□□□□ 0.1
COL1A1-205ENST00000476387 TWSG1Q9GZX9 223 aa15.68■□□□□ 0.1
COL1A1-205ENST00000476387 P2RY12Q9H244 342 aa15.68■□□□□ 0.1
COL1A1-205ENST00000476387 ACTL8Q9H568 366 aa15.68■□□□□ 0.1
COL1A1-205ENST00000476387 XKR8Q9H6D3 395 aa15.68■□□□□ 0.1
COL1A1-205ENST00000476387 FANCEQ9HB96 536 aa15.68■□□□□ 0.1
COL1A1-205ENST00000476387 ZNF71Q9NQZ8 489 aaPredicted RBP15.68■□□□□ 0.1
COL1A1-205ENST00000476387 C1GALT1Q9NS00 363 aa15.68■□□□□ 0.1
COL1A1-205ENST00000476387 KCND1Q9NSA2 647 aa15.68■□□□□ 0.1
COL1A1-205ENST00000476387 ICKQ9UPZ9 632 aa15.68■□□□□ 0.1
COL1A1-205ENST00000476387 FLNCQ14315 2725 aa15.68■□□□□ 0.1
COL1A1-205ENST00000476387 CDC14CA4D256 554 aa15.67■□□□□ 0.1
COL1A1-205ENST00000476387 H3BMM5 538 aa15.67■□□□□ 0.1
COL1A1-205ENST00000476387 MKRN2OSH3BPM6 223 aa15.67■□□□□ 0.1
COL1A1-205ENST00000476387 BTN3A3O00478 584 aa15.67■□□□□ 0.1
COL1A1-205ENST00000476387 SCRG1O75711 98 aa15.67■□□□□ 0.1
COL1A1-205ENST00000476387 NTRK1P04629 796 aa15.67■□□□□ 0.1
COL1A1-205ENST00000476387 MSL3P1P0C860 447 aa15.67■□□□□ 0.1
COL1A1-205ENST00000476387 PTPN4P29074 926 aa15.67■□□□□ 0.1
COL1A1-205ENST00000476387 MAGEA3P43357 314 aa15.67■□□□□ 0.1
COL1A1-205ENST00000476387 PMS2P54278 862 aa15.67■□□□□ 0.1
COL1A1-205ENST00000476387 THOC5Q13769 683 aaKnown RBP15.67■□□□□ 0.1
COL1A1-205ENST00000476387 RNASEH2BQ5TBB1 312 aaKnown RBP15.67■□□□□ 0.1
COL1A1-205ENST00000476387 IZUMO3Q5VZ72 239 aa15.67■□□□□ 0.1
COL1A1-205ENST00000476387 ZNF470Q6ECI4 717 aa15.67■□□□□ 0.1
COL1A1-205ENST00000476387 TCTN3Q6NUS6 607 aa15.67■□□□□ 0.1
COL1A1-205ENST00000476387 NEPROQ6NW34 567 aa15.67■□□□□ 0.1
COL1A1-205ENST00000476387 UNC5DQ6UXZ4 953 aa15.67■□□□□ 0.1
COL1A1-205ENST00000476387 ZNF517Q6ZMY9 492 aaPredicted RBP15.67■□□□□ 0.1
COL1A1-205ENST00000476387 SYDE1Q6ZW31 735 aaPredicted RBP15.67■□□□□ 0.1
COL1A1-205ENST00000476387 CREG2Q8IUH2 290 aa15.67■□□□□ 0.1
COL1A1-205ENST00000476387 TMEM126BQ8IUX1 230 aa15.67■□□□□ 0.1
COL1A1-205ENST00000476387 CFAP61Q8NHU2 1237 aa15.67■□□□□ 0.1
COL1A1-205ENST00000476387 SKA2Q8WVK7 121 aaPredicted RBP15.67■□□□□ 0.1
COL1A1-205ENST00000476387 LPGAT1Q92604 370 aa15.67■□□□□ 0.1
COL1A1-205ENST00000476387 TRIM56Q9BRZ2 755 aaKnown RBP15.67■□□□□ 0.1
COL1A1-205ENST00000476387 EPN3Q9H201 632 aa15.67■□□□□ 0.1
COL1A1-205ENST00000476387 SYTL2Q9HCH5 934 aa15.67■□□□□ 0.1
COL1A1-205ENST00000476387 ACTR10Q9NZ32 417 aa15.67■□□□□ 0.1
COL1A1-205ENST00000476387 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.67■□□□□ 0.1
COL1A1-205ENST00000476387 CCDC188H7C350 402 aa15.66■□□□□ 0.1
COL1A1-205ENST00000476387 GPC4O75487 556 aa15.66■□□□□ 0.1
COL1A1-205ENST00000476387 RFPL1O75677 317 aa15.66■□□□□ 0.1
COL1A1-205ENST00000476387 USP1O94782 785 aa15.66■□□□□ 0.1
COL1A1-205ENST00000476387 ESR1P03372 595 aa15.66■□□□□ 0.1
COL1A1-205ENST00000476387 SPTBP11277 2137 aa15.66■□□□□ 0.1
COL1A1-205ENST00000476387 PRDX3P30048 256 aaKnown RBP15.66■□□□□ 0.1
COL1A1-205ENST00000476387 FMO4P31512 558 aa15.66■□□□□ 0.1
COL1A1-205ENST00000476387 RPS15P62841 145 aaKnown RBP15.66■□□□□ 0.1
COL1A1-205ENST00000476387 DR1Q01658 176 aa15.66■□□□□ 0.1
COL1A1-205ENST00000476387 GPR19Q15760 415 aa15.66■□□□□ 0.1
COL1A1-205ENST00000476387 UGT8Q16880 541 aa15.66■□□□□ 0.1
COL1A1-205ENST00000476387 LONRF1Q17RB8 773 aa15.66■□□□□ 0.1
COL1A1-205ENST00000476387 CTSL3PQ5NE16 218 aa15.66■□□□□ 0.1
COL1A1-205ENST00000476387 TMEM135Q86UB9 458 aa15.66■□□□□ 0.1
COL1A1-205ENST00000476387 CILP2Q8IUL8 1156 aa15.66■□□□□ 0.1
COL1A1-205ENST00000476387 VRK3Q8IV63 474 aa15.66■□□□□ 0.1
COL1A1-205ENST00000476387 APLFQ8IW19 511 aaPredicted RBP15.66■□□□□ 0.1
COL1A1-205ENST00000476387 DCUN1D3Q8IWE4 304 aa15.66■□□□□ 0.1
COL1A1-205ENST00000476387 CALML6Q8TD86 181 aa15.66■□□□□ 0.1
COL1A1-205ENST00000476387 THAP4Q8WY91 577 aa15.66■□□□□ 0.1
COL1A1-205ENST00000476387 PPM1MQ96MI6 270 aa15.66■□□□□ 0.1
COL1A1-205ENST00000476387 PITPNM3Q9BZ71 974 aa15.66■□□□□ 0.1
COL1A1-205ENST00000476387 INTS10Q9NVR2 710 aaKnown RBP15.66■□□□□ 0.1
COL1A1-205ENST00000476387 IL1RAPL1Q9NZN1 696 aa15.66■□□□□ 0.1
COL1A1-205ENST00000476387 OR6C2Q9NZP2 312 aa15.66■□□□□ 0.1
COL1A1-205ENST00000476387 RNF14Q9UBS8 474 aa15.66■□□□□ 0.1
COL1A1-205ENST00000476387 CDYLQ9Y232 598 aa15.66■□□□□ 0.1
COL1A1-205ENST00000476387 MAN2B2Q9Y2E5 1009 aa15.66■□□□□ 0.1
COL1A1-205ENST00000476387 CRYL1Q9Y2S2 319 aa15.66■□□□□ 0.1
COL1A1-205ENST00000476387 MRFAP1Q9Y605 127 aa15.66■□□□□ 0.1
COL1A1-205ENST00000476387 LRRK2Q5S007 2527 aa15.65■□□□□ 0.1
COL1A1-205ENST00000476387 SEC16AO15027 2179 aa15.65■□□□□ 0.1
COL1A1-205ENST00000476387 SLC9B1P1A6NJY1 282 aa15.65■□□□□ 0.1
COL1A1-205ENST00000476387 E5RI56 91 aa15.65■□□□□ 0.1
COL1A1-205ENST00000476387 SLCO2B1O94956 709 aa15.65■□□□□ 0.1
COL1A1-205ENST00000476387 PTGIRP43119 386 aa15.65■□□□□ 0.1
COL1A1-205ENST00000476387 ADARP55265 1226 aaKnown RBP15.65■□□□□ 0.1
COL1A1-205ENST00000476387 KLRB1Q12918 225 aa15.65■□□□□ 0.1
COL1A1-205ENST00000476387 ABRQ12979 859 aa15.65■□□□□ 0.1
COL1A1-205ENST00000476387 PLEKHS1Q5SXH7 462 aa15.65■□□□□ 0.1
COL1A1-205ENST00000476387 TTC23LQ6PF05 361 aa15.65■□□□□ 0.1
COL1A1-205ENST00000476387 FBXO38Q6PIJ6 1188 aa15.65■□□□□ 0.1
COL1A1-205ENST00000476387 SPESP1Q6UW49 350 aa15.65■□□□□ 0.1
COL1A1-205ENST00000476387 SYVN1Q86TM6 617 aa15.65■□□□□ 0.1
COL1A1-205ENST00000476387 LMNTD2Q8IXW0 634 aa15.65■□□□□ 0.1
COL1A1-205ENST00000476387 ADGRF3Q8IZF5 1079 aa15.65■□□□□ 0.1
COL1A1-205ENST00000476387 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.65■□□□□ 0.1
COL1A1-205ENST00000476387 SIGLEC10Q96LC7 697 aa15.65■□□□□ 0.1
COL1A1-205ENST00000476387 FOPNLQ96NB1 174 aa15.65■□□□□ 0.1
COL1A1-205ENST00000476387 NRTNQ99748 197 aa15.65■□□□□ 0.1
COL1A1-205ENST00000476387 CCDC68Q9H2F9 335 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms