RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 C14orf80Q86SX3 495 aa17.37■□□□□ 0.37
CCM2-207ENST00000475551 CALHM3Q86XJ0 350 aa17.37■□□□□ 0.37
CCM2-207ENST00000475551 IFNL1Q8IU54 200 aa17.37■□□□□ 0.37
CCM2-207ENST00000475551 UBQLNLQ8IYU4 475 aa17.37■□□□□ 0.37
CCM2-207ENST00000475551 UMODL1-AS1Q8N2C9 162 aa17.37■□□□□ 0.37
CCM2-207ENST00000475551 ARRDC4Q8NCT1 418 aa17.37■□□□□ 0.37
CCM2-207ENST00000475551 BARD1Q99728 777 aaKnown RBP17.37■□□□□ 0.37
CCM2-207ENST00000475551 RBPJLQ9UBG7 517 aa17.37■□□□□ 0.37
CCM2-207ENST00000475551 DBTP11182 482 aaKnown RBP17.36■□□□□ 0.37
CCM2-207ENST00000475551 OR2B6P58173 313 aa17.36■□□□□ 0.37
CCM2-207ENST00000475551 SMUG1Q53HV7 270 aa17.36■□□□□ 0.37
CCM2-207ENST00000475551 SPATC1Q76KD6 591 aa17.36■□□□□ 0.37
CCM2-207ENST00000475551 ZDHHC21Q8IVQ6 265 aa17.36■□□□□ 0.37
CCM2-207ENST00000475551 SIMC1Q8NDZ2 872 aa17.36■□□□□ 0.37
CCM2-207ENST00000475551 BRSK1Q8TDC3 778 aa17.36■□□□□ 0.37
CCM2-207ENST00000475551 BLOC1S5Q8TDH9 187 aa17.36■□□□□ 0.37
CCM2-207ENST00000475551 GPR21Q99679 349 aa17.36■□□□□ 0.37
CCM2-207ENST00000475551 RAPGEFL1Q9UHV5 662 aa17.36■□□□□ 0.37
CCM2-207ENST00000475551 SPO11Q9Y5K1 396 aa17.36■□□□□ 0.37
CCM2-207ENST00000475551 PEX16Q9Y5Y5 336 aa17.36■□□□□ 0.37
CCM2-207ENST00000475551 HS3ST4Q9Y661 456 aa17.36■□□□□ 0.37
CCM2-207ENST00000475551 M0R082 166 aa17.36■□□□□ 0.37
CCM2-207ENST00000475551 MFN2O95140 757 aa17.36■□□□□ 0.37
CCM2-207ENST00000475551 FGF1P05230 155 aa17.36■□□□□ 0.37
CCM2-207ENST00000475551 MZF1P28698 734 aaPredicted RBP17.36■□□□□ 0.37
CCM2-207ENST00000475551 IL1RL1Q01638 556 aa17.36■□□□□ 0.37
CCM2-207ENST00000475551 AHSA2Q719I0 299 aa17.36■□□□□ 0.37
CCM2-207ENST00000475551 CEP68Q76N32 757 aa17.36■□□□□ 0.37
CCM2-207ENST00000475551 GPSM1Q86YR5 675 aa17.36■□□□□ 0.37
CCM2-207ENST00000475551 NLGN4XQ8N0W4 816 aa17.36■□□□□ 0.37
CCM2-207ENST00000475551 GLB1L3Q8NCI6 653 aaPredicted RBP17.36■□□□□ 0.37
CCM2-207ENST00000475551 HMCESQ96FZ2 354 aa17.36■□□□□ 0.37
CCM2-207ENST00000475551 PPP3R2Q96LZ3 170 aa17.36■□□□□ 0.37
CCM2-207ENST00000475551 C1orf109Q9NX04 203 aa17.36■□□□□ 0.37
CCM2-207ENST00000475551 QPCTLQ9NXS2 382 aa17.36■□□□□ 0.37
CCM2-207ENST00000475551 ANGPTL3Q9Y5C1 460 aa17.36■□□□□ 0.37
CCM2-207ENST00000475551 PCNTO95613 3336 aa17.35■□□□□ 0.37
CCM2-207ENST00000475551 TRBV5-3A0A0A0MS03 114 aa17.35■□□□□ 0.37
CCM2-207ENST00000475551 PNMA8CA0A1B0GUJ8 204 aa17.35■□□□□ 0.37
CCM2-207ENST00000475551 PTGESO14684 152 aa17.35■□□□□ 0.37
CCM2-207ENST00000475551 WBP4O75554 376 aaKnown RBP17.35■□□□□ 0.37
CCM2-207ENST00000475551 PRKCAP17252 672 aa17.35■□□□□ 0.37
CCM2-207ENST00000475551 HLA-DPA1P20036 260 aa17.35■□□□□ 0.37
CCM2-207ENST00000475551 GADD45AP24522 165 aa17.35■□□□□ 0.37
CCM2-207ENST00000475551 HOXA9P31269 272 aa17.35■□□□□ 0.37
CCM2-207ENST00000475551 GZMMP51124 257 aa17.35■□□□□ 0.37
CCM2-207ENST00000475551 SREBF2Q12772 1141 aa17.35■□□□□ 0.37
CCM2-207ENST00000475551 FAM174BQ3ZCQ3 159 aa17.35■□□□□ 0.37
CCM2-207ENST00000475551 KIAA1614Q5VZ46 1190 aa17.35■□□□□ 0.37
CCM2-207ENST00000475551 MSANTD2Q6P1R3 559 aa17.35■□□□□ 0.37
CCM2-207ENST00000475551 GCNT7Q6ZNI0 430 aa17.35■□□□□ 0.37
CCM2-207ENST00000475551 KBTBD8Q8NFY9 601 aa17.35■□□□□ 0.37
CCM2-207ENST00000475551 RASSF5Q8WWW0 418 aa17.35■□□□□ 0.37
CCM2-207ENST00000475551 REXO4Q9GZR2 422 aaKnown RBP17.35■□□□□ 0.37
CCM2-207ENST00000475551 EHD3Q9NZN3 535 aa17.35■□□□□ 0.37
CCM2-207ENST00000475551 CD274Q9NZQ7 290 aa17.35■□□□□ 0.37
CCM2-207ENST00000475551 WBP11Q9Y2W2 641 aaKnown RBP17.35■□□□□ 0.37
CCM2-207ENST00000475551 FKBP9O95302 570 aa17.35■□□□□ 0.37
CCM2-207ENST00000475551 TSPAN12O95859 305 aa17.35■□□□□ 0.37
CCM2-207ENST00000475551 IL6P05231 212 aa17.35■□□□□ 0.37
CCM2-207ENST00000475551 PRSS56P0CW18 603 aa17.35■□□□□ 0.37
CCM2-207ENST00000475551 MAGEA11P43364 429 aa17.35■□□□□ 0.37
CCM2-207ENST00000475551 NOGQ13253 232 aa17.35■□□□□ 0.37
CCM2-207ENST00000475551 OR2T5Q6IEZ7 315 aa17.35■□□□□ 0.37
CCM2-207ENST00000475551 CHCHD4Q8N4Q1 142 aa17.35■□□□□ 0.37
CCM2-207ENST00000475551 OR2T29Q8NH02 315 aa17.35■□□□□ 0.37
CCM2-207ENST00000475551 CDKN2AIPNLQ96HQ2 116 aa17.35■□□□□ 0.37
CCM2-207ENST00000475551 PARK7Q99497 189 aaKnown RBP17.35■□□□□ 0.37
CCM2-207ENST00000475551 PITX2Q99697 317 aa17.35■□□□□ 0.37
CCM2-207ENST00000475551 NUAK2Q9H093 628 aa17.35■□□□□ 0.37
CCM2-207ENST00000475551 ITM2CQ9NQX7 267 aa17.35■□□□□ 0.37
CCM2-207ENST00000475551 ABCC13Q9NSE7 274 aa17.35■□□□□ 0.37
CCM2-207ENST00000475551 AGO1Q9UL18 857 aaKnown RBP17.35■□□□□ 0.37
CCM2-207ENST00000475551 CAB39Q9Y376 341 aaPredicted RBP17.35■□□□□ 0.37
CCM2-207ENST00000475551 GRIP1Q9Y3R0 1128 aa17.35■□□□□ 0.37
CCM2-207ENST00000475551 IPPQ9Y573 584 aa17.35■□□□□ 0.37
CCM2-207ENST00000475551 TIMM13Q9Y5L4 95 aaPredicted RBP17.35■□□□□ 0.37
CCM2-207ENST00000475551 LOC110117498-PIK3R3F6TDL0 507 aa17.34■□□□□ 0.37
CCM2-207ENST00000475551 RPLP0P05388 317 aaKnown RBP17.34■□□□□ 0.37
CCM2-207ENST00000475551 MLLT6P55198 1093 aaPredicted RBP17.34■□□□□ 0.37
CCM2-207ENST00000475551 MFSD10Q14728 455 aa17.34■□□□□ 0.37
CCM2-207ENST00000475551 TBCEQ15813 527 aaPredicted RBP17.34■□□□□ 0.37
CCM2-207ENST00000475551 PRSS36Q5K4E3 855 aa17.34■□□□□ 0.37
CCM2-207ENST00000475551 SLC46A3Q7Z3Q1 461 aa17.34■□□□□ 0.37
CCM2-207ENST00000475551 PHACTR4Q8IZ21 702 aa17.34■□□□□ 0.37
CCM2-207ENST00000475551 PGBD5Q8N414 524 aa17.34■□□□□ 0.37
CCM2-207ENST00000475551 PIK3R3Q92569 461 aa17.34■□□□□ 0.37
CCM2-207ENST00000475551 MYLPFQ96A32 169 aa17.34■□□□□ 0.37
CCM2-207ENST00000475551 HBEGFQ99075 208 aa17.34■□□□□ 0.37
CCM2-207ENST00000475551 SP110Q9HB58 689 aa17.34■□□□□ 0.37
CCM2-207ENST00000475551 DDX28Q9NUL7 540 aaKnown RBP17.34■□□□□ 0.37
CCM2-207ENST00000475551 CCL27Q9Y4X3 112 aa17.34■□□□□ 0.37
CCM2-207ENST00000475551 RRN3P2A6NIE6 340 aa17.33■□□□□ 0.37
CCM2-207ENST00000475551 CENPXA8MT69 81 aa17.33■□□□□ 0.37
CCM2-207ENST00000475551 MUSKO15146 869 aa17.33■□□□□ 0.37
CCM2-207ENST00000475551 PGRP06401 933 aa17.33■□□□□ 0.37
CCM2-207ENST00000475551 HAPLN1P10915 354 aaPredicted RBP17.33■□□□□ 0.37
CCM2-207ENST00000475551 FPR1P21462 350 aa17.33■□□□□ 0.37
CCM2-207ENST00000475551 DNAJA1P31689 397 aaKnown RBP17.33■□□□□ 0.37
CCM2-207ENST00000475551 DDOSTP39656 456 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms