RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 OLIG2Q13516 323 aa13.61□□□□□ -0.23
ATG9A-220ENST00000475339 SPARCL1Q14515 664 aa13.61□□□□□ -0.23
ATG9A-220ENST00000475339 SSPNQ14714 243 aa13.61□□□□□ -0.23
ATG9A-220ENST00000475339 TLR1Q15399 786 aa13.61□□□□□ -0.23
ATG9A-220ENST00000475339 SIX1Q15475 284 aaPredicted RBP13.61□□□□□ -0.23
ATG9A-220ENST00000475339 DNTTIP2Q5QJE6 756 aaKnown RBP13.61□□□□□ -0.23
ATG9A-220ENST00000475339 HENMT1Q5T8I9 393 aaKnown RBP13.61□□□□□ -0.23
ATG9A-220ENST00000475339 PDPK2PQ6A1A2 396 aa13.61□□□□□ -0.23
ATG9A-220ENST00000475339 Q71RC1 249 aaPredicted RBP13.61□□□□□ -0.23
ATG9A-220ENST00000475339 TRAM1L1Q8N609 369 aa13.61□□□□□ -0.23
ATG9A-220ENST00000475339 GPR26Q8NDV2 337 aa13.61□□□□□ -0.23
ATG9A-220ENST00000475339 COG1Q8WTW3 980 aa13.61□□□□□ -0.23
ATG9A-220ENST00000475339 ATP13A2Q9NQ11 1180 aa13.61□□□□□ -0.23
ATG9A-220ENST00000475339 PAK5Q9P286 719 aa13.61□□□□□ -0.23
ATG9A-220ENST00000475339 ATXN10Q9UBB4 475 aa13.61□□□□□ -0.23
ATG9A-220ENST00000475339 NFKBIL1Q9UBC1 381 aaPredicted RBP13.61□□□□□ -0.23
ATG9A-220ENST00000475339 SLC23A2Q9UGH3 650 aa13.61□□□□□ -0.23
ATG9A-220ENST00000475339 DNAJC16Q9Y2G8 782 aa13.61□□□□□ -0.23
ATG9A-220ENST00000475339 PADI2Q9Y2J8 665 aa13.61□□□□□ -0.23
ATG9A-220ENST00000475339 FLNAP21333 2647 aaKnown RBP13.61□□□□□ -0.23
ATG9A-220ENST00000475339 DOCK10Q96BY6 2186 aa13.61□□□□□ -0.23
ATG9A-220ENST00000475339 GOLGA6L10A0A0M3HER8 536 aa13.6□□□□□ -0.23
ATG9A-220ENST00000475339 UBA6A0AVT1 1052 aaPredicted RBP13.6□□□□□ -0.23
ATG9A-220ENST00000475339 FADS2P1A8MWK0 482 aa13.6□□□□□ -0.23
ATG9A-220ENST00000475339 C9J4A7 227 aa13.6□□□□□ -0.23
ATG9A-220ENST00000475339 STX7O15400 261 aaKnown RBP13.6□□□□□ -0.23
ATG9A-220ENST00000475339 CRTAMO95727 393 aa13.6□□□□□ -0.23
ATG9A-220ENST00000475339 AP2A1O95782 977 aa13.6□□□□□ -0.23
ATG9A-220ENST00000475339 GAS8O95995 478 aa13.6□□□□□ -0.23
ATG9A-220ENST00000475339 IGHEP01854 428 aa13.6□□□□□ -0.23
ATG9A-220ENST00000475339 ZNF8P17098 575 aaPredicted RBP13.6□□□□□ -0.23
ATG9A-220ENST00000475339 HADHAP40939 763 aa13.6□□□□□ -0.23
ATG9A-220ENST00000475339 IST1P53990 364 aa13.6□□□□□ -0.23
ATG9A-220ENST00000475339 CSNK1G2P78368 415 aa13.6□□□□□ -0.23
ATG9A-220ENST00000475339 FOXD4Q12950 439 aaPredicted RBP13.6□□□□□ -0.23
ATG9A-220ENST00000475339 PLA2G4EQ3MJ16 856 aa13.6□□□□□ -0.23
ATG9A-220ENST00000475339 ZNF648Q5T619 568 aaPredicted RBP13.6□□□□□ -0.23
ATG9A-220ENST00000475339 DRICH1Q6PGQ1 229 aaPredicted RBP13.6□□□□□ -0.23
ATG9A-220ENST00000475339 CRTC3Q6UUV7 619 aa13.6□□□□□ -0.23
ATG9A-220ENST00000475339 IGFL2Q6UWQ7 119 aa13.6□□□□□ -0.23
ATG9A-220ENST00000475339 RANBP10Q6VN20 620 aa13.6□□□□□ -0.23
ATG9A-220ENST00000475339 PPP1R21Q6ZMI0 780 aa13.6□□□□□ -0.23
ATG9A-220ENST00000475339 LINC00523Q86TU6 105 aa13.6□□□□□ -0.23
ATG9A-220ENST00000475339 CHDHQ8NE62 594 aaPredicted RBP13.6□□□□□ -0.23
ATG9A-220ENST00000475339 CATSPER1Q8NEC5 780 aa13.6□□□□□ -0.23
ATG9A-220ENST00000475339 NR4A3Q92570 626 aa13.6□□□□□ -0.23
ATG9A-220ENST00000475339 EID2BQ96D98 161 aa13.6□□□□□ -0.23
ATG9A-220ENST00000475339 CXorf40BQ96DE9 158 aa13.6□□□□□ -0.23
ATG9A-220ENST00000475339 MAGEB10Q96LZ2 347 aaPredicted RBP13.6□□□□□ -0.23
ATG9A-220ENST00000475339 OSBPL9Q96SU4 736 aa13.6□□□□□ -0.23
ATG9A-220ENST00000475339 ACTR5Q9H9F9 607 aaPredicted RBP13.6□□□□□ -0.23
ATG9A-220ENST00000475339 ARFGAP3Q9NP61 516 aa13.6□□□□□ -0.23
ATG9A-220ENST00000475339 RAB6BQ9NRW1 208 aa13.6□□□□□ -0.23
ATG9A-220ENST00000475339 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.6□□□□□ -0.23
ATG9A-220ENST00000475339 SNX12Q9UMY4 172 aa13.6□□□□□ -0.23
ATG9A-220ENST00000475339 RPH3AQ9Y2J0 694 aaPredicted RBP13.6□□□□□ -0.23
ATG9A-220ENST00000475339 ARL5AQ9Y689 179 aa13.6□□□□□ -0.23
ATG9A-220ENST00000475339 CCDC88CQ9P219 2028 aa13.59□□□□□ -0.23
ATG9A-220ENST00000475339 FN1P02751 2386 aaKnown RBP13.59□□□□□ -0.23
ATG9A-220ENST00000475339 TLCD2A6NGC4 264 aa13.59□□□□□ -0.23
ATG9A-220ENST00000475339 ERI2A8K979 691 aaKnown RBP13.59□□□□□ -0.23
ATG9A-220ENST00000475339 FANCGO15287 622 aa13.59□□□□□ -0.23
ATG9A-220ENST00000475339 BUD23O43709 281 aaKnown RBP13.59□□□□□ -0.23
ATG9A-220ENST00000475339 UNC5CO95185 931 aa13.59□□□□□ -0.23
ATG9A-220ENST00000475339 CLDN14O95500 239 aa13.59□□□□□ -0.23
ATG9A-220ENST00000475339 ETS1P14921 441 aa13.59□□□□□ -0.23
ATG9A-220ENST00000475339 DNAJA1P31689 397 aaKnown RBP13.59□□□□□ -0.23
ATG9A-220ENST00000475339 DRG2P55039 364 aaKnown RBP13.59□□□□□ -0.23
ATG9A-220ENST00000475339 FOXL2P58012 376 aa13.59□□□□□ -0.23
ATG9A-220ENST00000475339 PLCL1Q15111 1095 aa13.59□□□□□ -0.23
ATG9A-220ENST00000475339 TAF1AQ15573 450 aaPredicted RBP13.59□□□□□ -0.23
ATG9A-220ENST00000475339 FBXO38Q6PIJ6 1188 aa13.59□□□□□ -0.23
ATG9A-220ENST00000475339 ABRAXAS1Q6UWZ7 409 aa13.59□□□□□ -0.23
ATG9A-220ENST00000475339 FAM151BQ6UXP7 276 aa13.59□□□□□ -0.23
ATG9A-220ENST00000475339 MEX3BQ6ZN04 569 aaKnown RBP13.59□□□□□ -0.23
ATG9A-220ENST00000475339 RBM12BQ8IXT5 1001 aaKnown RBP13.59□□□□□ -0.23
ATG9A-220ENST00000475339 RASGEF1CQ8N431 466 aa13.59□□□□□ -0.23
ATG9A-220ENST00000475339 DNAAF3Q8N9W5 541 aa13.59□□□□□ -0.23
ATG9A-220ENST00000475339 SPATA3Q8NHX4 192 aa13.59□□□□□ -0.23
ATG9A-220ENST00000475339 NRGNQ92686 78 aa13.59□□□□□ -0.23
ATG9A-220ENST00000475339 GLYATL1Q969I3 302 aa13.59□□□□□ -0.23
ATG9A-220ENST00000475339 MS4A14Q96JA4 679 aa13.59□□□□□ -0.23
ATG9A-220ENST00000475339 TAAR6Q96RI8 345 aa13.59□□□□□ -0.23
ATG9A-220ENST00000475339 WDR24Q96S15 920 aa13.59□□□□□ -0.23
ATG9A-220ENST00000475339 DHRS4Q9BTZ2 278 aa13.59□□□□□ -0.23
ATG9A-220ENST00000475339 ENKD1Q9H0I2 346 aa13.59□□□□□ -0.23
ATG9A-220ENST00000475339 CXXC4Q9H2H0 198 aa13.59□□□□□ -0.23
ATG9A-220ENST00000475339 DLL4Q9NR61 685 aa13.59□□□□□ -0.23
ATG9A-220ENST00000475339 DRG1Q9Y295 367 aaKnown RBP13.59□□□□□ -0.23
ATG9A-220ENST00000475339 PTRH2Q9Y3E5 179 aaKnown RBP13.59□□□□□ -0.23
ATG9A-220ENST00000475339 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.59□□□□□ -0.23
ATG9A-220ENST00000475339 NCOA6Q14686 2063 aaPredicted RBP13.59□□□□□ -0.23
ATG9A-220ENST00000475339 NSD1Q96L73 2696 aaPredicted RBP13.58□□□□□ -0.23
ATG9A-220ENST00000475339 GLYATL1P3A0A0U1RQE8 302 aa13.58□□□□□ -0.24
ATG9A-220ENST00000475339 ALOX12BO75342 701 aa13.58□□□□□ -0.24
ATG9A-220ENST00000475339 SLC25A14O95258 325 aaPredicted RBP13.58□□□□□ -0.24
ATG9A-220ENST00000475339 ZBTB11O95625 1053 aaPredicted RBP13.58□□□□□ -0.24
ATG9A-220ENST00000475339 APRTP07741 180 aa13.58□□□□□ -0.24
ATG9A-220ENST00000475339 ATXN8OSP0DMR3 200 aa13.58□□□□□ -0.24
ATG9A-220ENST00000475339 TCP1P17987 556 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms