RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 C2orf73Q8N5S3 287 aaPredicted RBP13.76□□□□□ -0.21
VAMP4-203ENST00000474047 ESX1Q8N693 406 aa13.76□□□□□ -0.21
VAMP4-203ENST00000474047 SLC22A18Q96BI1 424 aa13.76□□□□□ -0.21
VAMP4-203ENST00000474047 TUBB2BQ9BVA1 445 aa13.76□□□□□ -0.21
VAMP4-203ENST00000474047 LATS2Q9NRM7 1088 aa13.76□□□□□ -0.21
VAMP4-203ENST00000474047 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.76□□□□□ -0.21
VAMP4-203ENST00000474047 WHRNQ9P202 907 aa13.76□□□□□ -0.21
VAMP4-203ENST00000474047 PILRAQ9UKJ1 303 aa13.76□□□□□ -0.21
VAMP4-203ENST00000474047 RUVBL2Q9Y230 463 aaKnown RBP13.76□□□□□ -0.21
VAMP4-203ENST00000474047 NFS1Q9Y697 457 aa13.76□□□□□ -0.21
VAMP4-203ENST00000474047 CCNYL3P0C7X3 344 aa13.76□□□□□ -0.21
VAMP4-203ENST00000474047 PVRP15151 417 aa13.76□□□□□ -0.21
VAMP4-203ENST00000474047 ST6GAL1P15907 406 aa13.76□□□□□ -0.21
VAMP4-203ENST00000474047 UGT2B7P16662 529 aa13.76□□□□□ -0.21
VAMP4-203ENST00000474047 CD9P21926 228 aa13.76□□□□□ -0.21
VAMP4-203ENST00000474047 ATP5DP30049 168 aa13.76□□□□□ -0.21
VAMP4-203ENST00000474047 PKLRP30613 574 aa13.76□□□□□ -0.21
VAMP4-203ENST00000474047 BDKRB1P46663 353 aa13.76□□□□□ -0.21
VAMP4-203ENST00000474047 KIR2DS3Q14952 304 aa13.76□□□□□ -0.21
VAMP4-203ENST00000474047 KLHL38Q2WGJ6 581 aa13.76□□□□□ -0.21
VAMP4-203ENST00000474047 ACSBG2Q5FVE4 666 aa13.76□□□□□ -0.21
VAMP4-203ENST00000474047 C6orf15Q6UXA7 325 aaPredicted RBP13.76□□□□□ -0.21
VAMP4-203ENST00000474047 TMEM126BQ8IUX1 230 aa13.76□□□□□ -0.21
VAMP4-203ENST00000474047 ZBED8Q8IZ13 594 aa13.76□□□□□ -0.21
VAMP4-203ENST00000474047 C2CD4AQ8NCU7 369 aaPredicted RBP13.76□□□□□ -0.21
VAMP4-203ENST00000474047 FBXO36Q8NEA4 188 aa13.76□□□□□ -0.21
VAMP4-203ENST00000474047 OR8K5Q8NH50 307 aa13.76□□□□□ -0.21
VAMP4-203ENST00000474047 KCNJ9Q92806 393 aa13.76□□□□□ -0.21
VAMP4-203ENST00000474047 INPP5DQ92835 1189 aa13.76□□□□□ -0.21
VAMP4-203ENST00000474047 GPR21Q99679 349 aa13.76□□□□□ -0.21
VAMP4-203ENST00000474047 GPN2Q9H9Y4 310 aaPredicted RBP13.76□□□□□ -0.21
VAMP4-203ENST00000474047 GALPQ9UBC7 116 aa13.76□□□□□ -0.21
VAMP4-203ENST00000474047 RALYQ9UKM9 306 aaKnown RBP13.76□□□□□ -0.21
VAMP4-203ENST00000474047 BTRCQ9Y297 605 aa13.76□□□□□ -0.21
VAMP4-203ENST00000474047 TMEM184BQ9Y519 407 aaPredicted RBP13.76□□□□□ -0.21
VAMP4-203ENST00000474047 TEX264Q9Y6I9 313 aa13.76□□□□□ -0.21
VAMP4-203ENST00000474047 DSPP15924 2871 aaKnown RBP13.75□□□□□ -0.21
VAMP4-203ENST00000474047 TEX51A0A1B0GUA7 166 aa13.75□□□□□ -0.21
VAMP4-203ENST00000474047 K7ENP7 123 aa13.75□□□□□ -0.21
VAMP4-203ENST00000474047 RASGRF2O14827 1237 aa13.75□□□□□ -0.21
VAMP4-203ENST00000474047 ZZEF1O43149 2961 aa13.75□□□□□ -0.21
VAMP4-203ENST00000474047 C1orf105O95561 183 aa13.75□□□□□ -0.21
VAMP4-203ENST00000474047 MT-ND3P03897 115 aa13.75□□□□□ -0.21
VAMP4-203ENST00000474047 CATP04040 527 aaKnown RBP13.75□□□□□ -0.21
VAMP4-203ENST00000474047 TUBB4AP04350 444 aa13.75□□□□□ -0.21
VAMP4-203ENST00000474047 TPBGLP0DKB5 382 aa13.75□□□□□ -0.21
VAMP4-203ENST00000474047 CLCN7P51798 805 aa13.75□□□□□ -0.21
VAMP4-203ENST00000474047 CUL1Q13616 776 aa13.75□□□□□ -0.21
VAMP4-203ENST00000474047 ZNF549Q6P9A3 640 aa13.75□□□□□ -0.21
VAMP4-203ENST00000474047 INO80CQ6PI98 192 aaPredicted RBP13.75□□□□□ -0.21
VAMP4-203ENST00000474047 KIAA0408Q6ZU52 694 aa13.75□□□□□ -0.21
VAMP4-203ENST00000474047 TRIM73Q86UV7 250 aa13.75□□□□□ -0.21
VAMP4-203ENST00000474047 TAX1BP1Q86VP1 789 aa13.75□□□□□ -0.21
VAMP4-203ENST00000474047 PALM2Q8IXS6 379 aa13.75□□□□□ -0.21
VAMP4-203ENST00000474047 GALNT6Q8NCL4 622 aa13.75□□□□□ -0.21
VAMP4-203ENST00000474047 PYROXD1Q8WU10 500 aa13.75□□□□□ -0.21
VAMP4-203ENST00000474047 IL17FQ96PD4 163 aa13.75□□□□□ -0.21
VAMP4-203ENST00000474047 FCRL4Q96PJ5 515 aa13.75□□□□□ -0.21
VAMP4-203ENST00000474047 TRAPPC9Q96Q05 1148 aa13.75□□□□□ -0.21
VAMP4-203ENST00000474047 OR2A14Q96R47 310 aa13.75□□□□□ -0.21
VAMP4-203ENST00000474047 AARSD1Q9BTE6 412 aaKnown RBP13.75□□□□□ -0.21
VAMP4-203ENST00000474047 EFHD1Q9BUP0 239 aa13.75□□□□□ -0.21
VAMP4-203ENST00000474047 SLC7A5P2Q9GIP4 190 aa13.75□□□□□ -0.21
VAMP4-203ENST00000474047 SYTL2Q9HCH5 934 aa13.75□□□□□ -0.21
VAMP4-203ENST00000474047 FAM114A2Q9NRY5 505 aa13.75□□□□□ -0.21
VAMP4-203ENST00000474047 SPHK1Q9NYA1 384 aa13.75□□□□□ -0.21
VAMP4-203ENST00000474047 ZFATQ9P243 1243 aa13.75□□□□□ -0.21
VAMP4-203ENST00000474047 KLHL42Q9P2K6 505 aa13.75□□□□□ -0.21
VAMP4-203ENST00000474047 TRMT6Q9UJA5 497 aaKnown RBP13.75□□□□□ -0.21
VAMP4-203ENST00000474047 SERTAD3Q9UJW9 196 aa13.75□□□□□ -0.21
VAMP4-203ENST00000474047 SSUH2Q9Y2M2 353 aa13.75□□□□□ -0.21
VAMP4-203ENST00000474047 DHRS7Q9Y394 339 aa13.75□□□□□ -0.21
VAMP4-203ENST00000474047 A0A0J9YY10 115 aa13.74□□□□□ -0.21
VAMP4-203ENST00000474047 TMEM150CB9EJG8 249 aa13.74□□□□□ -0.21
VAMP4-203ENST00000474047 KIF2AO00139 706 aaPredicted RBP13.74□□□□□ -0.21
VAMP4-203ENST00000474047 EFSO43281 561 aa13.74□□□□□ -0.21
VAMP4-203ENST00000474047 ZNF28P17035 718 aa13.74□□□□□ -0.21
VAMP4-203ENST00000474047 SKIV2L2P42285 1042 aaKnown RBP13.74□□□□□ -0.21
VAMP4-203ENST00000474047 ABHD18Q0P651 414 aa13.74□□□□□ -0.21
VAMP4-203ENST00000474047 SRSF6Q13247 344 aaKnown RBP13.74□□□□□ -0.21
VAMP4-203ENST00000474047 SF1Q15637 639 aaKnown RBP13.74□□□□□ -0.21
VAMP4-203ENST00000474047 WHAMMP3Q1A5X7 153 aa13.74□□□□□ -0.21
VAMP4-203ENST00000474047 DUPD1Q68J44 220 aa13.74□□□□□ -0.21
VAMP4-203ENST00000474047 PWWP2BQ6NUJ5 590 aa13.74□□□□□ -0.21
VAMP4-203ENST00000474047 C8orf74Q6P047 294 aa13.74□□□□□ -0.21
VAMP4-203ENST00000474047 OR2L8Q8NGY9 312 aa13.74□□□□□ -0.21
VAMP4-203ENST00000474047 TCTN2Q96GX1 697 aa13.74□□□□□ -0.21
VAMP4-203ENST00000474047 NDNQ99608 321 aa13.74□□□□□ -0.21
VAMP4-203ENST00000474047 PITPNM3Q9BZ71 974 aa13.74□□□□□ -0.21
VAMP4-203ENST00000474047 SAYSD1Q9NPB0 183 aa13.74□□□□□ -0.21
VAMP4-203ENST00000474047 TAS2R13Q9NYV9 303 aa13.74□□□□□ -0.21
VAMP4-203ENST00000474047 SCRG1O75711 98 aa13.73□□□□□ -0.21
VAMP4-203ENST00000474047 MATN4O95460 622 aa13.73□□□□□ -0.21
VAMP4-203ENST00000474047 AHSGP02765 367 aa13.73□□□□□ -0.21
VAMP4-203ENST00000474047 NTRK1P04629 796 aa13.73□□□□□ -0.21
VAMP4-203ENST00000474047 CBSLP0DN79 551 aa13.73□□□□□ -0.21
VAMP4-203ENST00000474047 ENO3P13929 434 aaPredicted RBP13.73□□□□□ -0.21
VAMP4-203ENST00000474047 CBSP35520 551 aa13.73□□□□□ -0.21
VAMP4-203ENST00000474047 RGS4P49798 205 aa13.73□□□□□ -0.21
VAMP4-203ENST00000474047 PLTPP55058 493 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms