RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 NEK10Q6ZWH5 1172 aa7.4□□□□□ -1.22
CCDC93-207ENST00000474006 PIWIL4Q7Z3Z4 852 aaKnown RBP7.4□□□□□ -1.22
CCDC93-207ENST00000474006 CLEC14AQ86T13 490 aa7.4□□□□□ -1.22
CCDC93-207ENST00000474006 ISCA2Q86U28 154 aa7.4□□□□□ -1.22
CCDC93-207ENST00000474006 GKN2Q86XP6 184 aa7.4□□□□□ -1.22
CCDC93-207ENST00000474006 MYO1HQ8N1T3 1032 aa7.4□□□□□ -1.22
CCDC93-207ENST00000474006 SDR16C5Q8N3Y7 309 aa7.4□□□□□ -1.22
CCDC93-207ENST00000474006 PHC3Q8NDX5 983 aa7.4□□□□□ -1.22
CCDC93-207ENST00000474006 FAM46DQ8NEK8 389 aa7.4□□□□□ -1.22
CCDC93-207ENST00000474006 OR2I1PQ8NGU4 316 aa7.4□□□□□ -1.22
CCDC93-207ENST00000474006 CFAP61Q8NHU2 1237 aa7.4□□□□□ -1.22
CCDC93-207ENST00000474006 ASB11Q8WXH4 323 aa7.4□□□□□ -1.22
CCDC93-207ENST00000474006 TTC9Q92623 222 aa7.4□□□□□ -1.22
CCDC93-207ENST00000474006 TFGQ92734 400 aaPredicted RBP7.4□□□□□ -1.22
CCDC93-207ENST00000474006 TCEAL3Q969E4 200 aa7.4□□□□□ -1.22
CCDC93-207ENST00000474006 GTPBP2Q9BX10 602 aaKnown RBP7.4□□□□□ -1.22
CCDC93-207ENST00000474006 ZDHHC5Q9C0B5 715 aa7.4□□□□□ -1.22
CCDC93-207ENST00000474006 DERL2Q9GZP9 239 aa7.4□□□□□ -1.22
CCDC93-207ENST00000474006 NMRAL1Q9HBL8 299 aa7.4□□□□□ -1.22
CCDC93-207ENST00000474006 KCNK9Q9NPC2 374 aa7.4□□□□□ -1.22
CCDC93-207ENST00000474006 WASH6PQ9NQA3 447 aa7.4□□□□□ -1.22
CCDC93-207ENST00000474006 TMEM216Q9P0N5 145 aa7.4□□□□□ -1.22
CCDC93-207ENST00000474006 GDF2Q9UK05 429 aaPredicted RBP7.4□□□□□ -1.22
CCDC93-207ENST00000474006 GMEB2Q9UKD1 530 aa7.4□□□□□ -1.22
CCDC93-207ENST00000474006 PCOLCE2Q9UKZ9 415 aa7.4□□□□□ -1.22
CCDC93-207ENST00000474006 GRID1Q9ULK0 1009 aa7.4□□□□□ -1.22
CCDC93-207ENST00000474006 ACTL7BQ9Y614 415 aa7.4□□□□□ -1.22
CCDC93-207ENST00000474006 ANKRD36A6QL64 1941 aa7.39□□□□□ -1.23
CCDC93-207ENST00000474006 ELOA3CA0A087WX78 387 aaPredicted RBP7.39□□□□□ -1.23
CCDC93-207ENST00000474006 PRAMEF33A0A0G2JMD5 474 aa7.39□□□□□ -1.23
CCDC93-207ENST00000474006 NEMP2A6NFY4 417 aa7.39□□□□□ -1.23
CCDC93-207ENST00000474006 ELOA3DA6NLF2 546 aaPredicted RBP7.39□□□□□ -1.23
CCDC93-207ENST00000474006 OR52A4PA6NMU1 304 aa7.39□□□□□ -1.23
CCDC93-207ENST00000474006 PDZK1P1A8MUH7 402 aa7.39□□□□□ -1.23
CCDC93-207ENST00000474006 HMGB1P1B2RPK0 211 aaPredicted RBP7.39□□□□□ -1.23
CCDC93-207ENST00000474006 LMO7DNF2Z398 122 aa7.39□□□□□ -1.23
CCDC93-207ENST00000474006 GFYI3L273 518 aa7.39□□□□□ -1.23
CCDC93-207ENST00000474006 EIF3FO00303 357 aaPredicted RBP7.39□□□□□ -1.23
CCDC93-207ENST00000474006 IFRD1O00458 451 aaPredicted RBP7.39□□□□□ -1.23
CCDC93-207ENST00000474006 BTN3A1O00481 513 aa7.39□□□□□ -1.23
CCDC93-207ENST00000474006 TYROBPO43914 113 aa7.39□□□□□ -1.23
CCDC93-207ENST00000474006 C1orf105O95561 183 aa7.39□□□□□ -1.23
CCDC93-207ENST00000474006 RBP1P09455 135 aa7.39□□□□□ -1.23
CCDC93-207ENST00000474006 TFEBP19484 476 aa7.39□□□□□ -1.23
CCDC93-207ENST00000474006 RPA3P35244 121 aaPredicted RBP7.39□□□□□ -1.23
CCDC93-207ENST00000474006 GLRBP48167 497 aa7.39□□□□□ -1.23
CCDC93-207ENST00000474006 GPS2Q13227 327 aa7.39□□□□□ -1.23
CCDC93-207ENST00000474006 SF3A2Q15428 464 aaKnown RBP7.39□□□□□ -1.23
CCDC93-207ENST00000474006 OR4D1Q15615 310 aa7.39□□□□□ -1.23
CCDC93-207ENST00000474006 TSNQ15631 228 aaKnown RBP7.39□□□□□ -1.23
CCDC93-207ENST00000474006 RPE65Q16518 533 aa7.39□□□□□ -1.23
CCDC93-207ENST00000474006 ELOA3BQ3SY89 546 aa7.39□□□□□ -1.23
CCDC93-207ENST00000474006 HSP90B2PQ58FF3 399 aa7.39□□□□□ -1.23
CCDC93-207ENST00000474006 N4BP2L1Q5TBK1 243 aaPredicted RBP7.39□□□□□ -1.23
CCDC93-207ENST00000474006 LRRC8EQ6NSJ5 796 aa7.39□□□□□ -1.23
CCDC93-207ENST00000474006 KLC3Q6P597 504 aa7.39□□□□□ -1.23
CCDC93-207ENST00000474006 OGFOD3Q6PK18 319 aa7.39□□□□□ -1.23
CCDC93-207ENST00000474006 LVRNQ6Q4G3 990 aa7.39□□□□□ -1.23
CCDC93-207ENST00000474006 SLCO4C1Q6ZQN7 724 aa7.39□□□□□ -1.23
CCDC93-207ENST00000474006 UBE2R2Q712K3 238 aaPredicted RBP7.39□□□□□ -1.23
CCDC93-207ENST00000474006 PDZD3Q86UT5 571 aa7.39□□□□□ -1.23
CCDC93-207ENST00000474006 GATAD2AQ86YP4 633 aa7.39□□□□□ -1.23
CCDC93-207ENST00000474006 SFTPA2Q8IWL1 248 aa7.39□□□□□ -1.23
CCDC93-207ENST00000474006 CACTIN-AS1Q8N1I8 211 aa7.39□□□□□ -1.23
CCDC93-207ENST00000474006 TMEM151AQ8N4L1 468 aa7.39□□□□□ -1.23
CCDC93-207ENST00000474006 ZNF548Q8NEK5 533 aaPredicted RBP7.39□□□□□ -1.23
CCDC93-207ENST00000474006 ELOA3Q8NG57 546 aa7.39□□□□□ -1.23
CCDC93-207ENST00000474006 STAG3L4Q8TBR4 150 aa7.39□□□□□ -1.23
CCDC93-207ENST00000474006 SAP25Q8TEE9 199 aa7.39□□□□□ -1.23
CCDC93-207ENST00000474006 DLG3Q92796 817 aa7.39□□□□□ -1.23
CCDC93-207ENST00000474006 KIAA1191Q96A73 305 aa7.39□□□□□ -1.23
CCDC93-207ENST00000474006 PTERQ96BW5 349 aa7.39□□□□□ -1.23
CCDC93-207ENST00000474006 RMDN2Q96LZ7 410 aa7.39□□□□□ -1.23
CCDC93-207ENST00000474006 C12orf66Q96MD2 445 aa7.39□□□□□ -1.23
CCDC93-207ENST00000474006 TSNARE1Q96NA8 513 aa7.39□□□□□ -1.23
CCDC93-207ENST00000474006 FOPNLQ96NB1 174 aa7.39□□□□□ -1.23
CCDC93-207ENST00000474006 FERD3LQ96RJ6 166 aa7.39□□□□□ -1.23
CCDC93-207ENST00000474006 SLC12A9Q9BXP2 914 aa7.39□□□□□ -1.23
CCDC93-207ENST00000474006 ADAM19Q9H013 955 aa7.39□□□□□ -1.23
CCDC93-207ENST00000474006 C12orf65Q9H3J6 166 aaKnown RBP7.39□□□□□ -1.23
CCDC93-207ENST00000474006 TFB2MQ9H5Q4 396 aaKnown RBP7.39□□□□□ -1.23
CCDC93-207ENST00000474006 ALG9Q9H6U8 611 aa7.39□□□□□ -1.23
CCDC93-207ENST00000474006 PARVBQ9HBI1 364 aa7.39□□□□□ -1.23
CCDC93-207ENST00000474006 SSU72Q9NP77 194 aaKnown RBP7.39□□□□□ -1.23
CCDC93-207ENST00000474006 ZNF624Q9P2J8 865 aaPredicted RBP7.39□□□□□ -1.23
CCDC93-207ENST00000474006 ADAMTS6Q9UKP5 1117 aa7.39□□□□□ -1.23
CCDC93-207ENST00000474006 PLLPQ9Y342 182 aa7.39□□□□□ -1.23
CCDC93-207ENST00000474006 PCDHGB7Q9Y5F8 929 aa7.39□□□□□ -1.23
CCDC93-207ENST00000474006 CFAP20Q9Y6A4 193 aaKnown RBP7.39□□□□□ -1.23
CCDC93-207ENST00000474006 CSNK1G3Q9Y6M4 447 aa7.39□□□□□ -1.23
CCDC93-207ENST00000474006 USP34Q70CQ2 3546 aa7.39□□□□□ -1.23
CCDC93-207ENST00000474006 WDFY4Q6ZS81 3184 aa7.38□□□□□ -1.23
CCDC93-207ENST00000474006 A6NCN8 305 aa7.38□□□□□ -1.23
CCDC93-207ENST00000474006 NPEPPSL1A6NEC2 478 aa7.38□□□□□ -1.23
CCDC93-207ENST00000474006 OR5K4A6NMS3 321 aa7.38□□□□□ -1.23
CCDC93-207ENST00000474006 TRIM38O00635 465 aa7.38□□□□□ -1.23
CCDC93-207ENST00000474006 SLC16A5O15375 505 aa7.38□□□□□ -1.23
CCDC93-207ENST00000474006 PRPF4O43172 522 aaKnown RBP eCLIP7.38□□□□□ -1.23
CCDC93-207ENST00000474006 GLRA3O75311 464 aa7.38□□□□□ -1.23
CCDC93-207ENST00000474006 PSIP1O75475 530 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms