RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 OR6C74A6NCV1 312 aa12.72□□□□□ -0.37
TPM3-216ENST00000473036 CDRT15L2A8MXV6 281 aa12.72□□□□□ -0.37
TPM3-216ENST00000473036 B8ZZF3 427 aa12.72□□□□□ -0.37
TPM3-216ENST00000473036 H3BMM5 538 aa12.72□□□□□ -0.37
TPM3-216ENST00000473036 PLD2O14939 933 aa12.72□□□□□ -0.37
TPM3-216ENST00000473036 SPAG6O75602 509 aa12.72□□□□□ -0.37
TPM3-216ENST00000473036 MATN4O95460 622 aa12.72□□□□□ -0.37
TPM3-216ENST00000473036 APOA4P06727 396 aa12.72□□□□□ -0.37
TPM3-216ENST00000473036 GSTA2P09210 222 aa12.72□□□□□ -0.37
TPM3-216ENST00000473036 POLR2CP19387 275 aaPredicted RBP12.72□□□□□ -0.37
TPM3-216ENST00000473036 BDKRB1P46663 353 aa12.72□□□□□ -0.37
TPM3-216ENST00000473036 KPNA2P52292 529 aaKnown RBP12.72□□□□□ -0.37
TPM3-216ENST00000473036 PLOD1Q02809 727 aaPredicted RBP12.72□□□□□ -0.37
TPM3-216ENST00000473036 MGAT5Q09328 741 aa12.72□□□□□ -0.37
TPM3-216ENST00000473036 PLCL1Q15111 1095 aa12.72□□□□□ -0.37
TPM3-216ENST00000473036 KLHL38Q2WGJ6 581 aa12.72□□□□□ -0.37
TPM3-216ENST00000473036 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.72□□□□□ -0.37
TPM3-216ENST00000473036 FOXR1Q6PIV2 292 aa12.72□□□□□ -0.37
TPM3-216ENST00000473036 TMEM207Q6UWW9 146 aa12.72□□□□□ -0.37
TPM3-216ENST00000473036 CPNE9Q8IYJ1 553 aa12.72□□□□□ -0.37
TPM3-216ENST00000473036 TBC1D21Q8IYX1 336 aa12.72□□□□□ -0.37
TPM3-216ENST00000473036 FBXO39Q8N4B4 442 aa12.72□□□□□ -0.37
TPM3-216ENST00000473036 LINC01555Q8NAE3 123 aa12.72□□□□□ -0.37
TPM3-216ENST00000473036 WDR36Q8NI36 951 aaKnown RBP12.72□□□□□ -0.37
TPM3-216ENST00000473036 DENND1AQ8TEH3 1009 aa12.72□□□□□ -0.37
TPM3-216ENST00000473036 KCNJ9Q92806 393 aa12.72□□□□□ -0.37
TPM3-216ENST00000473036 IL17FQ96PD4 163 aa12.72□□□□□ -0.37
TPM3-216ENST00000473036 TSSK1BQ9BXA7 367 aa12.72□□□□□ -0.37
TPM3-216ENST00000473036 CLMPQ9H6B4 373 aa12.72□□□□□ -0.37
TPM3-216ENST00000473036 HRASLS2Q9NWW9 162 aa12.72□□□□□ -0.37
TPM3-216ENST00000473036 SIDT1Q9NXL6 827 aaKnown RBP12.72□□□□□ -0.37
TPM3-216ENST00000473036 SPHK1Q9NYA1 384 aa12.72□□□□□ -0.37
TPM3-216ENST00000473036 VPS9D1Q9Y2B5 631 aa12.72□□□□□ -0.37
TPM3-216ENST00000473036 SSUH2Q9Y2M2 353 aa12.72□□□□□ -0.37
TPM3-216ENST00000473036 DHRS7Q9Y394 339 aa12.72□□□□□ -0.37
TPM3-216ENST00000473036 FAM159BA6NKW6 160 aa12.71□□□□□ -0.37
TPM3-216ENST00000473036 C9orf172C9J069 976 aa12.71□□□□□ -0.37
TPM3-216ENST00000473036 PRAMEF10O60809 474 aa12.71□□□□□ -0.37
TPM3-216ENST00000473036 FAM155BO75949 473 aa12.71□□□□□ -0.37
TPM3-216ENST00000473036 TNFSF15O95150 251 aa12.71□□□□□ -0.37
TPM3-216ENST00000473036 C1orf105O95561 183 aa12.71□□□□□ -0.37
TPM3-216ENST00000473036 TSPAN12O95859 305 aa12.71□□□□□ -0.37
TPM3-216ENST00000473036 NDUFS1P28331 727 aa12.71□□□□□ -0.37
TPM3-216ENST00000473036 SH3BP2P78314 561 aa12.71□□□□□ -0.37
TPM3-216ENST00000473036 ILF2Q12905 390 aaKnown RBP12.71□□□□□ -0.37
TPM3-216ENST00000473036 TRA2AQ13595 282 aaKnown RBP eCLIP12.71□□□□□ -0.374e-13■■■■□ 25.8
TPM3-216ENST00000473036 KRT33BQ14525 404 aa12.71□□□□□ -0.37
TPM3-216ENST00000473036 EFTUD2Q15029 972 aaKnown RBP eCLIP12.71□□□□□ -0.37
TPM3-216ENST00000473036 KYNUQ16719 465 aa12.71□□□□□ -0.37
TPM3-216ENST00000473036 HECTD2Q5U5R9 776 aa12.71□□□□□ -0.37
TPM3-216ENST00000473036 IRGCQ6NXR0 463 aa12.71□□□□□ -0.37
TPM3-216ENST00000473036 PAQR3Q6TCH7 311 aa12.71□□□□□ -0.37
TPM3-216ENST00000473036 C3orf62Q6ZUJ4 267 aa12.71□□□□□ -0.37
TPM3-216ENST00000473036 TRMT10CQ7L0Y3 403 aaKnown RBP12.71□□□□□ -0.37
TPM3-216ENST00000473036 PIWIL4Q7Z3Z4 852 aaKnown RBP12.71□□□□□ -0.37
TPM3-216ENST00000473036 STRA8Q7Z7C7 330 aa12.71□□□□□ -0.37
TPM3-216ENST00000473036 ZC3HC1Q86WB0 502 aaKnown RBP12.71□□□□□ -0.37
TPM3-216ENST00000473036 PLXDC1Q8IUK5 500 aa12.71□□□□□ -0.37
TPM3-216ENST00000473036 PALM2Q8IXS6 379 aa12.71□□□□□ -0.37
TPM3-216ENST00000473036 LCN9Q8WX39 176 aa12.71□□□□□ -0.37
TPM3-216ENST00000473036 KLHL6Q8WZ60 621 aa12.71□□□□□ -0.37
TPM3-216ENST00000473036 DLG3Q92796 817 aa12.71□□□□□ -0.37
TPM3-216ENST00000473036 MAP3K3Q99759 626 aa12.71□□□□□ -0.37
TPM3-216ENST00000473036 DPYSL5Q9BPU6 564 aa12.71□□□□□ -0.37
TPM3-216ENST00000473036 STRADBQ9C0K7 418 aa12.71□□□□□ -0.37
TPM3-216ENST00000473036 TRIT1Q9H3H1 467 aaKnown RBP12.71□□□□□ -0.37
TPM3-216ENST00000473036 APMAPQ9HDC9 416 aa12.71□□□□□ -0.37
TPM3-216ENST00000473036 THSD1Q9NS62 852 aa12.71□□□□□ -0.37
TPM3-216ENST00000473036 NINJ2Q9NZG7 142 aa12.71□□□□□ -0.37
TPM3-216ENST00000473036 FOXJ2Q9P0K8 574 aa12.71□□□□□ -0.37
TPM3-216ENST00000473036 PISDQ9UG56 409 aa12.71□□□□□ -0.37
TPM3-216ENST00000473036 IKZF3Q9UKT9 509 aa12.71□□□□□ -0.37
TPM3-216ENST00000473036 NFU1Q9UMS0 254 aa12.71□□□□□ -0.37
TPM3-216ENST00000473036 TDRKHQ9Y2W6 561 aaKnown RBP12.71□□□□□ -0.37
TPM3-216ENST00000473036 HECTD1Q9ULT8 2610 aa12.71□□□□□ -0.38
TPM3-216ENST00000473036 ARHGEF33A8MVX0 844 aa12.7□□□□□ -0.38
TPM3-216ENST00000473036 E5RI56 91 aa12.7□□□□□ -0.38
TPM3-216ENST00000473036 F8W8V4 182 aa12.7□□□□□ -0.38
TPM3-216ENST00000473036 TMX2-CTNND1H3BSU7 103 aa12.7□□□□□ -0.38
TPM3-216ENST00000473036 HGSO14964 777 aaPredicted RBP12.7□□□□□ -0.38
TPM3-216ENST00000473036 KPNA5O15131 536 aa12.7□□□□□ -0.38
TPM3-216ENST00000473036 PFDN6O15212 129 aa12.7□□□□□ -0.38
TPM3-216ENST00000473036 ZW10O43264 779 aa12.7□□□□□ -0.38
TPM3-216ENST00000473036 WISP3O95389 354 aaPredicted RBP12.7□□□□□ -0.38
TPM3-216ENST00000473036 ANKRD34CP0C6C1 535 aa12.7□□□□□ -0.38
TPM3-216ENST00000473036 FDXRP22570 491 aa12.7□□□□□ -0.38
TPM3-216ENST00000473036 ATP5DP30049 168 aa12.7□□□□□ -0.38
TPM3-216ENST00000473036 PKLRP30613 574 aa12.7□□□□□ -0.38
TPM3-216ENST00000473036 MLLT3P42568 568 aaPredicted RBP12.7□□□□□ -0.38
TPM3-216ENST00000473036 PPM1FP49593 454 aaPredicted RBP12.7□□□□□ -0.38
TPM3-216ENST00000473036 SEPHS1P49903 392 aa12.7□□□□□ -0.38
TPM3-216ENST00000473036 VAC14Q08AM6 782 aa12.7□□□□□ -0.38
TPM3-216ENST00000473036 ZNF460Q14592 562 aa12.7□□□□□ -0.38
TPM3-216ENST00000473036 TMED2Q15363 201 aa12.7□□□□□ -0.38
TPM3-216ENST00000473036 ZNF449Q6P9G9 518 aa12.7□□□□□ -0.38
TPM3-216ENST00000473036 UNC5DQ6UXZ4 953 aa12.7□□□□□ -0.38
TPM3-216ENST00000473036 CYS1Q717R9 158 aa12.7□□□□□ -0.38
TPM3-216ENST00000473036 PRSS42Q7Z5A4 293 aa12.7□□□□□ -0.38
TPM3-216ENST00000473036 AMIGO1Q86WK6 493 aa12.7□□□□□ -0.38
TPM3-216ENST00000473036 FAM20CQ8IXL6 584 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms