RNA–Protein interactions for RNA: ENST00000472610.5

COMMD3-210, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-210ENST00000472610 TCN2P20062 427 aa16.48■□□□□ 0.23
COMMD3-210ENST00000472610 CD9P21926 228 aa16.48■□□□□ 0.23
COMMD3-210ENST00000472610 ATP5DP30049 168 aa16.48■□□□□ 0.23
COMMD3-210ENST00000472610 PKLRP30613 574 aa16.48■□□□□ 0.23
COMMD3-210ENST00000472610 CCNFP41002 786 aa16.48■□□□□ 0.23
COMMD3-210ENST00000472610 LY6DQ14210 128 aa16.48■□□□□ 0.23
COMMD3-210ENST00000472610 TBR1Q16650 682 aa16.48■□□□□ 0.23
COMMD3-210ENST00000472610 LINC00303Q3SY05 128 aa16.48■□□□□ 0.23
COMMD3-210ENST00000472610 ZNF470Q6ECI4 717 aa16.48■□□□□ 0.23
COMMD3-210ENST00000472610 KLHL7Q8IXQ5 586 aa16.48■□□□□ 0.23
COMMD3-210ENST00000472610 RAB42Q8N4Z0 105 aa16.48■□□□□ 0.23
COMMD3-210ENST00000472610 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.48■□□□□ 0.23
COMMD3-210ENST00000472610 SKA2Q8WVK7 121 aaPredicted RBP16.48■□□□□ 0.23
COMMD3-210ENST00000472610 STARD8Q92502 1023 aa16.48■□□□□ 0.23
COMMD3-210ENST00000472610 LRFN5Q96NI6 719 aa16.48■□□□□ 0.23
COMMD3-210ENST00000472610 TRIM56Q9BRZ2 755 aaKnown RBP16.48■□□□□ 0.23
COMMD3-210ENST00000472610 FAM117AQ9C073 453 aa16.48■□□□□ 0.23
COMMD3-210ENST00000472610 CCDC68Q9H2F9 335 aa16.48■□□□□ 0.23
COMMD3-210ENST00000472610 C20orf96Q9NUD7 363 aaPredicted RBP16.48■□□□□ 0.23
COMMD3-210ENST00000472610 SPHK1Q9NYA1 384 aa16.48■□□□□ 0.23
COMMD3-210ENST00000472610 SLC39A10Q9ULF5 831 aa16.48■□□□□ 0.23
COMMD3-210ENST00000472610 PLAGL1Q9UM63 463 aa16.48■□□□□ 0.23
COMMD3-210ENST00000472610 PCDHGA6Q9Y5G7 932 aa16.48■□□□□ 0.23
COMMD3-210ENST00000472610 A0A0J9YY10 115 aa16.47■□□□□ 0.23
COMMD3-210ENST00000472610 TMEM150CB9EJG8 249 aa16.47■□□□□ 0.23
COMMD3-210ENST00000472610 RASGRF2O14827 1237 aa16.47■□□□□ 0.23
COMMD3-210ENST00000472610 NKX2-8O15522 239 aa16.47■□□□□ 0.23
COMMD3-210ENST00000472610 NIPSNAP2O75323 286 aa16.47■□□□□ 0.23
COMMD3-210ENST00000472610 TTC4O95801 387 aa16.47■□□□□ 0.23
COMMD3-210ENST00000472610 PRB1P04280 392 aa16.47■□□□□ 0.23
COMMD3-210ENST00000472610 KLK3P07288 261 aaPredicted RBP16.47■□□□□ 0.23
COMMD3-210ENST00000472610 PVRP15151 417 aa16.47■□□□□ 0.23
COMMD3-210ENST00000472610 PGAM1P18669 254 aa16.47■□□□□ 0.23
COMMD3-210ENST00000472610 IVDP26440 423 aa16.47■□□□□ 0.23
COMMD3-210ENST00000472610 DR1Q01658 176 aa16.47■□□□□ 0.23
COMMD3-210ENST00000472610 GBX1Q14549 363 aa16.47■□□□□ 0.23
COMMD3-210ENST00000472610 IZUMO3Q5VZ72 239 aa16.47■□□□□ 0.23
COMMD3-210ENST00000472610 BORAQ6PGQ7 559 aa16.47■□□□□ 0.23
COMMD3-210ENST00000472610 AGGF1Q8N302 714 aaeCLIP16.47■□□□□ 0.23
COMMD3-210ENST00000472610 ZBTB2Q8N680 514 aa16.47■□□□□ 0.23
COMMD3-210ENST00000472610 C19orf47Q8N9M1 422 aaKnown RBP16.47■□□□□ 0.23
COMMD3-210ENST00000472610 OR2L8Q8NGY9 312 aa16.47■□□□□ 0.23
COMMD3-210ENST00000472610 FLVCR1-AS1Q8TAF5 88 aa16.47■□□□□ 0.23
COMMD3-210ENST00000472610 N4BP2L2Q92802 583 aaPredicted RBP16.47■□□□□ 0.23
COMMD3-210ENST00000472610 FAM167BQ9BTA0 163 aa16.47■□□□□ 0.23
COMMD3-210ENST00000472610 MENTQ9BUN1 341 aa16.47■□□□□ 0.23
COMMD3-210ENST00000472610 GPR87Q9BY21 358 aa16.47■□□□□ 0.23
COMMD3-210ENST00000472610 IL1RAPL1Q9NZN1 696 aa16.47■□□□□ 0.23
COMMD3-210ENST00000472610 KLHL42Q9P2K6 505 aa16.47■□□□□ 0.23
COMMD3-210ENST00000472610 COMMD10Q9Y6G5 202 aa16.47■□□□□ 0.23
COMMD3-210ENST00000472610 TERTO14746 1132 aaKnown RBP16.46■□□□□ 0.23
COMMD3-210ENST00000472610 FKBP9O95302 570 aa16.46■□□□□ 0.23
COMMD3-210ENST00000472610 C1orf105O95561 183 aa16.46■□□□□ 0.23
COMMD3-210ENST00000472610 HBQ1P09105 142 aa16.46■□□□□ 0.23
COMMD3-210ENST00000472610 ITGA1P56199 1179 aa16.46■□□□□ 0.23
COMMD3-210ENST00000472610 CDC20Q12834 499 aa16.46■□□□□ 0.23
COMMD3-210ENST00000472610 CTBP1Q13363 440 aa16.46■□□□□ 0.23
COMMD3-210ENST00000472610 DNASE1L3Q13609 305 aa16.46■□□□□ 0.23
COMMD3-210ENST00000472610 GRB7Q14451 532 aa16.46■□□□□ 0.23
COMMD3-210ENST00000472610 MORF4L2Q15014 288 aa16.46■□□□□ 0.23
COMMD3-210ENST00000472610 TTLL9Q3SXZ7 439 aa16.46■□□□□ 0.23
COMMD3-210ENST00000472610 CDHR3Q6ZTQ4 885 aa16.46■□□□□ 0.23
COMMD3-210ENST00000472610 DENND6AQ8IWF6 608 aa16.46■□□□□ 0.23
COMMD3-210ENST00000472610 GPR135Q8IZ08 494 aa16.46■□□□□ 0.23
COMMD3-210ENST00000472610 OR1L3Q8NH93 324 aa16.46■□□□□ 0.23
COMMD3-210ENST00000472610 SEC14L1Q92503 715 aa16.46■□□□□ 0.23
COMMD3-210ENST00000472610 RNF31Q96EP0 1072 aa16.46■□□□□ 0.23
COMMD3-210ENST00000472610 EBNA1BP2Q99848 306 aaKnown RBP16.46■□□□□ 0.23
COMMD3-210ENST00000472610 KLHL25Q9H0H3 589 aa16.46■□□□□ 0.23
COMMD3-210ENST00000472610 FBXO5Q9UKT4 447 aa16.46■□□□□ 0.23
COMMD3-210ENST00000472610 NFS1Q9Y697 457 aa16.46■□□□□ 0.23
COMMD3-210ENST00000472610 LOC400499M0QZD8 3231 aa16.45■□□□□ 0.22
COMMD3-210ENST00000472610 E7EQ34 232 aa16.45■□□□□ 0.22
COMMD3-210ENST00000472610 NDC80O14777 642 aa16.45■□□□□ 0.22
COMMD3-210ENST00000472610 KATNA1O75449 491 aa16.45■□□□□ 0.22
COMMD3-210ENST00000472610 C1QL1O75973 258 aa16.45■□□□□ 0.22
COMMD3-210ENST00000472610 MATN4O95460 622 aa16.45■□□□□ 0.22
COMMD3-210ENST00000472610 CYP2A7P20853 494 aa16.45■□□□□ 0.22
COMMD3-210ENST00000472610 F8A1P23610 371 aa16.45■□□□□ 0.22
COMMD3-210ENST00000472610 PEBP1P30086 187 aaKnown RBP16.45■□□□□ 0.22
COMMD3-210ENST00000472610 CCR10P46092 362 aa16.45■□□□□ 0.22
COMMD3-210ENST00000472610 RPS15P62841 145 aaKnown RBP16.45■□□□□ 0.22
COMMD3-210ENST00000472610 DHX9Q08211 1270 aaKnown RBP16.45■□□□□ 0.22
COMMD3-210ENST00000472610 ZNF789Q5FWF6 425 aa16.45■□□□□ 0.22
COMMD3-210ENST00000472610 SPANXN3Q5MJ09 141 aa16.45■□□□□ 0.22
COMMD3-210ENST00000472610 C16orf46Q6P387 395 aa16.45■□□□□ 0.22
COMMD3-210ENST00000472610 CNSTQ6PJW8 725 aa16.45■□□□□ 0.22
COMMD3-210ENST00000472610 NEK10Q6ZWH5 1172 aa16.45■□□□□ 0.22
COMMD3-210ENST00000472610 TRIM73Q86UV7 250 aa16.45■□□□□ 0.22
COMMD3-210ENST00000472610 KCNMB4Q86W47 210 aa16.45■□□□□ 0.22
COMMD3-210ENST00000472610 PDIK1LQ8N165 341 aa16.45■□□□□ 0.22
COMMD3-210ENST00000472610 ZNF843Q8N446 348 aa16.45■□□□□ 0.22
COMMD3-210ENST00000472610 EXD3Q8N9H8 876 aa16.45■□□□□ 0.22
COMMD3-210ENST00000472610 LINC01555Q8NAE3 123 aa16.45■□□□□ 0.22
COMMD3-210ENST00000472610 CT55Q8WUE5 264 aa16.45■□□□□ 0.22
COMMD3-210ENST00000472610 KCNJ9Q92806 393 aa16.45■□□□□ 0.22
COMMD3-210ENST00000472610 CLIP3Q96DZ5 547 aa16.45■□□□□ 0.22
COMMD3-210ENST00000472610 SLC7A5P2Q9GIP4 190 aa16.45■□□□□ 0.22
COMMD3-210ENST00000472610 ADNPQ9H2P0 1102 aa16.45■□□□□ 0.22
COMMD3-210ENST00000472610 FAM60AQ9NP50 221 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms