RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 EPB41L1Q9H4G0 881 aa16.39■□□□□ 0.21
CCM2-205ENST00000472223 CNOT10Q9H9A5 744 aaKnown RBP16.39■□□□□ 0.21
CCM2-205ENST00000472223 MED4Q9NPJ6 270 aa16.39■□□□□ 0.21
CCM2-205ENST00000472223 MKS1Q9NXB0 559 aa16.39■□□□□ 0.21
CCM2-205ENST00000472223 KCNK4Q9NYG8 393 aa16.39■□□□□ 0.21
CCM2-205ENST00000472223 NUDT4Q9NZJ9 180 aa16.39■□□□□ 0.21
CCM2-205ENST00000472223 SPATA7Q9P0W8 599 aa16.39■□□□□ 0.21
CCM2-205ENST00000472223 ADAMTS6Q9UKP5 1117 aa16.39■□□□□ 0.21
CCM2-205ENST00000472223 PDE10AQ9Y233 779 aa16.39■□□□□ 0.21
CCM2-205ENST00000472223 LAMA1P25391 3075 aa16.39■□□□□ 0.21
CCM2-205ENST00000472223 FAM221BA6H8Z2 402 aa16.38■□□□□ 0.21
CCM2-205ENST00000472223 GDF9O60383 454 aa16.38■□□□□ 0.21
CCM2-205ENST00000472223 GFAPP14136 432 aa16.38■□□□□ 0.21
CCM2-205ENST00000472223 ALDH4A1P30038 563 aa16.38■□□□□ 0.21
CCM2-205ENST00000472223 RAB28P51157 221 aa16.38■□□□□ 0.21
CCM2-205ENST00000472223 EPHA4P54764 986 aa16.38■□□□□ 0.21
CCM2-205ENST00000472223 CDKL1Q00532 357 aa16.38■□□□□ 0.21
CCM2-205ENST00000472223 ARHGAP19Q14CB8 494 aa16.38■□□□□ 0.21
CCM2-205ENST00000472223 TGFBIQ15582 683 aa16.38■□□□□ 0.21
CCM2-205ENST00000472223 TNFAIP8L3Q5GJ75 292 aa16.38■□□□□ 0.21
CCM2-205ENST00000472223 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.38■□□□□ 0.21
CCM2-205ENST00000472223 ANKS6Q68DC2 871 aa16.38■□□□□ 0.21
CCM2-205ENST00000472223 SBSNQ6UWP8 590 aa16.38■□□□□ 0.21
CCM2-205ENST00000472223 AMIGO1Q86WK6 493 aa16.38■□□□□ 0.21
CCM2-205ENST00000472223 SYTL1Q8IYJ3 562 aa16.38■□□□□ 0.21
CCM2-205ENST00000472223 OR4E2Q8NGC2 313 aa16.38■□□□□ 0.21
CCM2-205ENST00000472223 OR52E1Q8NGJ3 308 aa16.38■□□□□ 0.21
CCM2-205ENST00000472223 OR10G6Q8NH81 332 aa16.38■□□□□ 0.21
CCM2-205ENST00000472223 NETO1Q8TDF5 533 aa16.38■□□□□ 0.21
CCM2-205ENST00000472223 CCDC126Q96EE4 140 aa16.38■□□□□ 0.21
CCM2-205ENST00000472223 PKP4Q99569 1192 aa16.38■□□□□ 0.21
CCM2-205ENST00000472223 ZNF358Q9NW07 568 aa16.38■□□□□ 0.21
CCM2-205ENST00000472223 NKIRAS1Q9NYS0 192 aa16.38■□□□□ 0.21
CCM2-205ENST00000472223 TMEM216Q9P0N5 145 aa16.38■□□□□ 0.21
CCM2-205ENST00000472223 CPSF2Q9P2I0 782 aaKnown RBP16.38■□□□□ 0.21
CCM2-205ENST00000472223 XPR1Q9UBH6 696 aa16.38■□□□□ 0.21
CCM2-205ENST00000472223 BTBD3Q9Y2F9 522 aa16.38■□□□□ 0.21
CCM2-205ENST00000472223 RNF215Q9Y6U7 377 aa16.38■□□□□ 0.21
CCM2-205ENST00000472223 ANKRD12Q6UB98 2062 aa16.38■□□□□ 0.21
CCM2-205ENST00000472223 FRYLO94915 3013 aa16.37■□□□□ 0.21
CCM2-205ENST00000472223 EME2A4GXA9 379 aaPredicted RBP16.37■□□□□ 0.21
CCM2-205ENST00000472223 NCF1BA6NI72 391 aaPredicted RBP16.37■□□□□ 0.21
CCM2-205ENST00000472223 LILRA5A6NI73 299 aa16.37■□□□□ 0.21
CCM2-205ENST00000472223 NCF1CA8MVU1 366 aaPredicted RBP16.37■□□□□ 0.21
CCM2-205ENST00000472223 MYO1CO00159 1063 aa16.37■□□□□ 0.21
CCM2-205ENST00000472223 PPM1DO15297 605 aa16.37■□□□□ 0.21
CCM2-205ENST00000472223 TM9SF1O15321 606 aa16.37■□□□□ 0.21
CCM2-205ENST00000472223 ZWINTO95229 277 aa16.37■□□□□ 0.21
CCM2-205ENST00000472223 NCF1P14598 390 aaPredicted RBP16.37■□□□□ 0.21
CCM2-205ENST00000472223 SDHBP21912 280 aa16.37■□□□□ 0.21
CCM2-205ENST00000472223 GMPRP36959 345 aa16.37■□□□□ 0.21
CCM2-205ENST00000472223 OR4D1Q15615 310 aa16.37■□□□□ 0.21
CCM2-205ENST00000472223 PROX2Q3B8N5 592 aa16.37■□□□□ 0.21
CCM2-205ENST00000472223 TECRLQ5HYJ1 363 aa16.37■□□□□ 0.21
CCM2-205ENST00000472223 SULT1C3Q6IMI6 304 aa16.37■□□□□ 0.21
CCM2-205ENST00000472223 SH2D5Q6ZV89 423 aa16.37■□□□□ 0.21
CCM2-205ENST00000472223 EFL1Q7Z2Z2 1120 aaKnown RBP16.37■□□□□ 0.21
CCM2-205ENST00000472223 OOSP2Q86WS3 158 aa16.37■□□□□ 0.21
CCM2-205ENST00000472223 SFTPA2Q8IWL1 248 aa16.37■□□□□ 0.21
CCM2-205ENST00000472223 RDH11Q8TC12 318 aa16.37■□□□□ 0.21
CCM2-205ENST00000472223 SLC22A18Q96BI1 424 aa16.37■□□□□ 0.21
CCM2-205ENST00000472223 ARL8AQ96BM9 186 aa16.37■□□□□ 0.21
CCM2-205ENST00000472223 PTERQ96BW5 349 aa16.37■□□□□ 0.21
CCM2-205ENST00000472223 GPR78Q96P69 363 aa16.37■□□□□ 0.21
CCM2-205ENST00000472223 SELENOSQ9BQE4 189 aa16.37■□□□□ 0.21
CCM2-205ENST00000472223 ABCG4Q9H172 646 aa16.37■□□□□ 0.21
CCM2-205ENST00000472223 WWOXQ9NZC7 414 aa16.37■□□□□ 0.21
CCM2-205ENST00000472223 OR6C2Q9NZP2 312 aa16.37■□□□□ 0.21
CCM2-205ENST00000472223 PLLPQ9Y342 182 aa16.37■□□□□ 0.21
CCM2-205ENST00000472223 MYO15AQ9UKN7 3530 aa16.36■□□□□ 0.21
CCM2-205ENST00000472223 MATN2O00339 956 aa16.36■□□□□ 0.21
CCM2-205ENST00000472223 PRPF4O43172 522 aaKnown RBP eCLIP16.36■□□□□ 0.21
CCM2-205ENST00000472223 TNFSF14O43557 240 aa16.36■□□□□ 0.21
CCM2-205ENST00000472223 UBXN7O94888 489 aa16.36■□□□□ 0.21
CCM2-205ENST00000472223 MYL2P10916 166 aa16.36■□□□□ 0.21
CCM2-205ENST00000472223 CCND1P24385 295 aa16.36■□□□□ 0.21
CCM2-205ENST00000472223 PNLIPRP1P54315 467 aa16.36■□□□□ 0.21
CCM2-205ENST00000472223 GPLD1P80108 840 aa16.36■□□□□ 0.21
CCM2-205ENST00000472223 ASPHQ12797 758 aa16.36■□□□□ 0.21
CCM2-205ENST00000472223 TSTA3Q13630 321 aaPredicted RBP16.36■□□□□ 0.21
CCM2-205ENST00000472223 PHKG1Q16816 387 aa16.36■□□□□ 0.21
CCM2-205ENST00000472223 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.36■□□□□ 0.21
CCM2-205ENST00000472223 THEMIS2Q5TEJ8 643 aa16.36■□□□□ 0.21
CCM2-205ENST00000472223 C16orf46Q6P387 395 aa16.36■□□□□ 0.21
CCM2-205ENST00000472223 SLC22A9Q8IVM8 553 aa16.36■□□□□ 0.21
CCM2-205ENST00000472223 SPNS2Q8IVW8 549 aa16.36■□□□□ 0.21
CCM2-205ENST00000472223 FBXO39Q8N4B4 442 aa16.36■□□□□ 0.21
CCM2-205ENST00000472223 Q8N9G6 341 aaPredicted RBP16.36■□□□□ 0.21
CCM2-205ENST00000472223 IFI44Q8TCB0 444 aa16.36■□□□□ 0.21
CCM2-205ENST00000472223 TCP10LQ8TDR4 215 aa16.36■□□□□ 0.21
CCM2-205ENST00000472223 CCDC74AQ96AQ1 378 aa16.36■□□□□ 0.21
CCM2-205ENST00000472223 FBXL8Q96CD0 374 aa16.36■□□□□ 0.21
CCM2-205ENST00000472223 TLCD1Q96CP7 247 aa16.36■□□□□ 0.21
CCM2-205ENST00000472223 PLAGL1Q9UM63 463 aa16.36■□□□□ 0.21
CCM2-205ENST00000472223 TNPO3Q9Y5L0 923 aaKnown RBP16.36■□□□□ 0.21
CCM2-205ENST00000472223 ZFHX2Q9C0A1 2572 aaPredicted RBP16.36■□□□□ 0.21
CCM2-205ENST00000472223 GOLGA4Q13439 2230 aaKnown RBP16.35■□□□□ 0.21
CCM2-205ENST00000472223 UBXN8O00124 270 aa16.35■□□□□ 0.21
CCM2-205ENST00000472223 DUX1O43812 170 aa16.35■□□□□ 0.21
CCM2-205ENST00000472223 IPO13O94829 963 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms