RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 ESRRGP62508 458 aa10.38□□□□□ -0.75
APLF-204ENST00000471727 CYP4F3Q08477 520 aa10.38□□□□□ -0.75
APLF-204ENST00000471727 ABRQ12979 859 aa10.38□□□□□ -0.75
APLF-204ENST00000471727 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.38□□□□□ -0.75
APLF-204ENST00000471727 TMEM259Q4ZIN3 620 aa10.38□□□□□ -0.75
APLF-204ENST00000471727 HABP4Q5JVS0 413 aaKnown RBP10.38□□□□□ -0.75
APLF-204ENST00000471727 LDLRAP1Q5SW96 308 aa10.38□□□□□ -0.75
APLF-204ENST00000471727 LRIF1Q5T3J3 769 aa10.38□□□□□ -0.75
APLF-204ENST00000471727 TTC33Q6PID6 262 aaPredicted RBP10.38□□□□□ -0.75
APLF-204ENST00000471727 ABRAXAS1Q6UWZ7 409 aa10.38□□□□□ -0.75
APLF-204ENST00000471727 PATL1Q86TB9 770 aaKnown RBP10.38□□□□□ -0.75
APLF-204ENST00000471727 TMEM25Q86YD3 366 aa10.38□□□□□ -0.75
APLF-204ENST00000471727 EPHX4Q8IUS5 362 aa10.38□□□□□ -0.75
APLF-204ENST00000471727 RASGRP3Q8IV61 690 aa10.38□□□□□ -0.75
APLF-204ENST00000471727 TMEM132CQ8N3T6 1108 aa10.38□□□□□ -0.75
APLF-204ENST00000471727 KLHL23Q8NBE8 558 aa10.38□□□□□ -0.75
APLF-204ENST00000471727 OR2A12Q8NGT7 310 aa10.38□□□□□ -0.75
APLF-204ENST00000471727 ZFP28Q8NHY6 868 aa10.38□□□□□ -0.75
APLF-204ENST00000471727 PNPT1Q8TCS8 783 aaKnown RBP10.38□□□□□ -0.75
APLF-204ENST00000471727 CSGALNACT1Q8TDX6 532 aa10.38□□□□□ -0.75
APLF-204ENST00000471727 WFIKKN2Q8TEU8 576 aa10.38□□□□□ -0.75
APLF-204ENST00000471727 STARD8Q92502 1023 aa10.38□□□□□ -0.75
APLF-204ENST00000471727 TESCQ96BS2 214 aa10.38□□□□□ -0.75
APLF-204ENST00000471727 FBXL8Q96CD0 374 aa10.38□□□□□ -0.75
APLF-204ENST00000471727 CCDC97Q96F63 343 aaPredicted RBP10.38□□□□□ -0.75
APLF-204ENST00000471727 RNF145Q96MT1 663 aa10.38□□□□□ -0.75
APLF-204ENST00000471727 THUMPD3Q9BV44 507 aaKnown RBP10.38□□□□□ -0.75
APLF-204ENST00000471727 RBM38Q9H0Z9 239 aaKnown RBP10.38□□□□□ -0.75
APLF-204ENST00000471727 MAGIXQ9H6Y5 334 aa10.38□□□□□ -0.75
APLF-204ENST00000471727 IL23AQ9NPF7 189 aa10.38□□□□□ -0.75
APLF-204ENST00000471727 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.38□□□□□ -0.75
APLF-204ENST00000471727 TSR3Q9UJK0 312 aaKnown RBP10.38□□□□□ -0.75
APLF-204ENST00000471727 ERVW-1Q9UQF0 538 aa10.38□□□□□ -0.75
APLF-204ENST00000471727 INSL6Q9Y581 213 aa10.38□□□□□ -0.75
APLF-204ENST00000471727 KCNE1BA0A087WTH5 132 aa10.37□□□□□ -0.75
APLF-204ENST00000471727 TRIM64A6NGJ6 449 aa10.37□□□□□ -0.75
APLF-204ENST00000471727 A8MX80 341 aa10.37□□□□□ -0.75
APLF-204ENST00000471727 FAM220BPB1ANY3 271 aa10.37□□□□□ -0.75
APLF-204ENST00000471727 NEDD8-MDP1E9PL57 170 aa10.37□□□□□ -0.75
APLF-204ENST00000471727 DLGAP1O14490 977 aa10.37□□□□□ -0.75
APLF-204ENST00000471727 VILLO15195 856 aa10.37□□□□□ -0.75
APLF-204ENST00000471727 CCL16O15467 120 aa10.37□□□□□ -0.75
APLF-204ENST00000471727 BNIP3LO60238 219 aa10.37□□□□□ -0.75
APLF-204ENST00000471727 TPST1O60507 370 aa10.37□□□□□ -0.75
APLF-204ENST00000471727 XYLBO75191 536 aa10.37□□□□□ -0.75
APLF-204ENST00000471727 RETP07949 1114 aa10.37□□□□□ -0.75
APLF-204ENST00000471727 SRPRAP08240 638 aaKnown RBP10.37□□□□□ -0.75
APLF-204ENST00000471727 HNRNPA1P09651 372 aaKnown RBP eCLIP10.37□□□□□ -0.75
APLF-204ENST00000471727 HSD3B1P14060 373 aa10.37□□□□□ -0.75
APLF-204ENST00000471727 TYRP14679 529 aa10.37□□□□□ -0.75
APLF-204ENST00000471727 NCK1P16333 377 aa10.37□□□□□ -0.75
APLF-204ENST00000471727 HSD3B2P26439 372 aa10.37□□□□□ -0.75
APLF-204ENST00000471727 S100A3P33764 101 aa10.37□□□□□ -0.75
APLF-204ENST00000471727 HMGCS1Q01581 520 aa10.37□□□□□ -0.75
APLF-204ENST00000471727 PCDH1Q08174 1060 aa10.37□□□□□ -0.75
APLF-204ENST00000471727 HSPA14Q0VDF9 509 aa10.37□□□□□ -0.75
APLF-204ENST00000471727 CSTF3Q12996 717 aaKnown RBP10.37□□□□□ -0.75
APLF-204ENST00000471727 GK3PQ14409 553 aa10.37□□□□□ -0.75
APLF-204ENST00000471727 ZNF284Q2VY69 593 aa10.37□□□□□ -0.75
APLF-204ENST00000471727 FAM174BQ3ZCQ3 159 aa10.37□□□□□ -0.75
APLF-204ENST00000471727 NECAB2Q7Z6G3 386 aa10.37□□□□□ -0.75
APLF-204ENST00000471727 TMCO2Q7Z6W1 182 aaPredicted RBP10.37□□□□□ -0.75
APLF-204ENST00000471727 RALGPS2Q86X27 583 aaPredicted RBP10.37□□□□□ -0.75
APLF-204ENST00000471727 KLHDC8AQ8IYD2 350 aa10.37□□□□□ -0.75
APLF-204ENST00000471727 NRSN1Q8IZ57 195 aa10.37□□□□□ -0.75
APLF-204ENST00000471727 SVOPLQ8N434 492 aa10.37□□□□□ -0.75
APLF-204ENST00000471727 DTWD1Q8N5C7 304 aa10.37□□□□□ -0.75
APLF-204ENST00000471727 MRPL43Q8N983 215 aaKnown RBP10.37□□□□□ -0.75
APLF-204ENST00000471727 FAM47BQ8NA70 645 aa10.37□□□□□ -0.75
APLF-204ENST00000471727 DDHD1Q8NEL9 900 aa10.37□□□□□ -0.75
APLF-204ENST00000471727 SDCCAG3Q96C92 435 aa10.37□□□□□ -0.75
APLF-204ENST00000471727 VPS35Q96QK1 796 aa10.37□□□□□ -0.75
APLF-204ENST00000471727 OR52E6Q96RD3 313 aa10.37□□□□□ -0.75
APLF-204ENST00000471727 GRIP2Q9C0E4 1043 aa10.37□□□□□ -0.75
APLF-204ENST00000471727 C11orf49Q9H6J7 331 aa10.37□□□□□ -0.75
APLF-204ENST00000471727 DNAJB9Q9UBS3 223 aa10.37□□□□□ -0.75
APLF-204ENST00000471727 SLCO3A1Q9UIG8 710 aa10.37□□□□□ -0.75
APLF-204ENST00000471727 FADS3Q9Y5Q0 445 aa10.37□□□□□ -0.75
APLF-204ENST00000471727 AK5Q9Y6K8 562 aa10.37□□□□□ -0.75
APLF-204ENST00000471727 TRBV5-3A0A0A0MS03 114 aa10.36□□□□□ -0.75
APLF-204ENST00000471727 FAM149AA5PLN7 773 aa10.36□□□□□ -0.75
APLF-204ENST00000471727 CCDC160A6NGH7 325 aa10.36□□□□□ -0.75
APLF-204ENST00000471727 UPK3BL1B0FP48 263 aa10.36□□□□□ -0.75
APLF-204ENST00000471727 UPK3BL2E5RIL1 263 aa10.36□□□□□ -0.75
APLF-204ENST00000471727 ZNF701M0R085 212 aaPredicted RBP10.36□□□□□ -0.75
APLF-204ENST00000471727 PSMD11O00231 422 aa10.36□□□□□ -0.75
APLF-204ENST00000471727 ZNF197O14709 1029 aa10.36□□□□□ -0.75
APLF-204ENST00000471727 SLCO2B1O94956 709 aa10.36□□□□□ -0.75
APLF-204ENST00000471727 PDYNP01213 254 aa10.36□□□□□ -0.75
APLF-204ENST00000471727 ALBP02768 609 aa10.36□□□□□ -0.75
APLF-204ENST00000471727 POU2F2P09086 479 aa10.36□□□□□ -0.75
APLF-204ENST00000471727 GSTM1P09488 218 aa10.36□□□□□ -0.75
APLF-204ENST00000471727 JUPP14923 745 aa10.36□□□□□ -0.75
APLF-204ENST00000471727 GJA1P17302 382 aa10.36□□□□□ -0.75
APLF-204ENST00000471727 XPAP23025 273 aaPredicted RBP10.36□□□□□ -0.75
APLF-204ENST00000471727 MAP4P27816 1152 aaKnown RBP10.36□□□□□ -0.75
APLF-204ENST00000471727 TRPC1P48995 793 aa10.36□□□□□ -0.75
APLF-204ENST00000471727 ALDH3A2P51648 485 aa10.36□□□□□ -0.75
APLF-204ENST00000471727 PNLIPRP1P54315 467 aa10.36□□□□□ -0.75
APLF-204ENST00000471727 MTPNP58546 118 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms