RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 SLAMF1Q13291 335 aa13.47□□□□□ -0.25
NPHP4-207ENST00000470763 DCAF4L1Q3SXM0 396 aa13.47□□□□□ -0.25
NPHP4-207ENST00000470763 ZC3H12BQ5HYM0 836 aaKnown RBP13.47□□□□□ -0.25
NPHP4-207ENST00000470763 RAP1GAP2Q684P5 730 aa13.47□□□□□ -0.25
NPHP4-207ENST00000470763 LETMD1Q6P1Q0 360 aa13.47□□□□□ -0.25
NPHP4-207ENST00000470763 ZNF517Q6ZMY9 492 aaPredicted RBP13.47□□□□□ -0.25
NPHP4-207ENST00000470763 ZDHHC21Q8IVQ6 265 aa13.47□□□□□ -0.25
NPHP4-207ENST00000470763 MSRB3Q8IXL7 192 aa13.47□□□□□ -0.25
NPHP4-207ENST00000470763 AADATQ8N5Z0 425 aa13.47□□□□□ -0.25
NPHP4-207ENST00000470763 TP53I13Q8NBR0 393 aaPredicted RBP13.47□□□□□ -0.25
NPHP4-207ENST00000470763 SLC13A3Q8WWT9 602 aa13.47□□□□□ -0.25
NPHP4-207ENST00000470763 JPH3Q8WXH2 748 aaPredicted RBP13.47□□□□□ -0.25
NPHP4-207ENST00000470763 DNASE1L2Q92874 299 aa13.47□□□□□ -0.25
NPHP4-207ENST00000470763 FUBP1Q96AE4 644 aaKnown RBP13.47□□□□□ -0.25
NPHP4-207ENST00000470763 PGAP3Q96FM1 320 aaPredicted RBP13.47□□□□□ -0.25
NPHP4-207ENST00000470763 PDLIM5Q96HC4 596 aaKnown RBP13.47□□□□□ -0.25
NPHP4-207ENST00000470763 EGLN2Q96KS0 407 aa13.47□□□□□ -0.25
NPHP4-207ENST00000470763 SDHCQ99643 169 aaPredicted RBP13.47□□□□□ -0.25
NPHP4-207ENST00000470763 APOL4Q9BPW4 351 aa13.47□□□□□ -0.25
NPHP4-207ENST00000470763 CENPOQ9BU64 300 aa13.47□□□□□ -0.25
NPHP4-207ENST00000470763 TNKS2Q9H2K2 1166 aa13.47□□□□□ -0.25
NPHP4-207ENST00000470763 RPRD1BQ9NQG5 326 aaKnown RBP13.47□□□□□ -0.25
NPHP4-207ENST00000470763 SLC6A13Q9NSD5 602 aa13.47□□□□□ -0.25
NPHP4-207ENST00000470763 BTBD3Q9Y2F9 522 aa13.47□□□□□ -0.25
NPHP4-207ENST00000470763 C19orf81C9J6K1 198 aa13.46□□□□□ -0.25
NPHP4-207ENST00000470763 H3BQ06 376 aaPredicted RBP13.46□□□□□ -0.25
NPHP4-207ENST00000470763 ARNTLO00327 626 aa13.46□□□□□ -0.25
NPHP4-207ENST00000470763 PCDHGA12O60330 932 aa13.46□□□□□ -0.25
NPHP4-207ENST00000470763 WBP4O75554 376 aaKnown RBP13.46□□□□□ -0.25
NPHP4-207ENST00000470763 ZNF682O95780 498 aa13.46□□□□□ -0.25
NPHP4-207ENST00000470763 LGALS2P05162 132 aa13.46□□□□□ -0.25
NPHP4-207ENST00000470763 MRPL19P49406 292 aaKnown RBP13.46□□□□□ -0.25
NPHP4-207ENST00000470763 KRR1Q13601 381 aaKnown RBP13.46□□□□□ -0.25
NPHP4-207ENST00000470763 MAPKAPK3Q16644 382 aa13.46□□□□□ -0.25
NPHP4-207ENST00000470763 SIRPB2Q5JXA9 342 aa13.46□□□□□ -0.25
NPHP4-207ENST00000470763 SLC27A1Q6PCB7 646 aa13.46□□□□□ -0.25
NPHP4-207ENST00000470763 TRAF7Q6Q0C0 670 aa13.46□□□□□ -0.25
NPHP4-207ENST00000470763 GALNT10Q86SR1 603 aa13.46□□□□□ -0.25
NPHP4-207ENST00000470763 LINC01465Q8N7H1 131 aa13.46□□□□□ -0.25
NPHP4-207ENST00000470763 GTF2H4Q92759 462 aa13.46□□□□□ -0.25
NPHP4-207ENST00000470763 FYTTD1Q96QD9 318 aaKnown RBP13.46□□□□□ -0.25
NPHP4-207ENST00000470763 CFHR5Q9BXR6 569 aa13.46□□□□□ -0.25
NPHP4-207ENST00000470763 PRRG3Q9BZD7 231 aa13.46□□□□□ -0.25
NPHP4-207ENST00000470763 CCNB1IP1Q9NPC3 277 aa13.46□□□□□ -0.25
NPHP4-207ENST00000470763 CRNNQ9UBG3 495 aaPredicted RBP13.46□□□□□ -0.25
NPHP4-207ENST00000470763 TBC1D24Q9ULP9 559 aa13.46□□□□□ -0.25
NPHP4-207ENST00000470763 MYBPHLA2RUH7 354 aa13.46□□□□□ -0.25
NPHP4-207ENST00000470763 LOC110117498-PIK3R3F6TDL0 507 aa13.46□□□□□ -0.25
NPHP4-207ENST00000470763 hCG_2039718K7EN88 272 aa13.46□□□□□ -0.25
NPHP4-207ENST00000470763 CTDSP2O14595 271 aa13.46□□□□□ -0.25
NPHP4-207ENST00000470763 CAPN1P07384 714 aa13.46□□□□□ -0.25
NPHP4-207ENST00000470763 CNPP09543 421 aaKnown RBP13.46□□□□□ -0.25
NPHP4-207ENST00000470763 UGT2B10P36537 528 aa13.46□□□□□ -0.25
NPHP4-207ENST00000470763 ERVPABLB-1P60509 514 aa13.46□□□□□ -0.25
NPHP4-207ENST00000470763 ZNF33AQ06730 810 aa13.46□□□□□ -0.25
NPHP4-207ENST00000470763 AP5B1Q2VPB7 878 aa13.46□□□□□ -0.25
NPHP4-207ENST00000470763 Q6ZPB1 254 aaPredicted RBP13.46□□□□□ -0.25
NPHP4-207ENST00000470763 ZNF438Q7Z4V0 828 aa13.46□□□□□ -0.25
NPHP4-207ENST00000470763 METTL6Q8TCB7 284 aa13.46□□□□□ -0.25
NPHP4-207ENST00000470763 ZNF296Q8WUU4 475 aaPredicted RBP13.46□□□□□ -0.25
NPHP4-207ENST00000470763 PHOX2BQ99453 314 aa13.46□□□□□ -0.25
NPHP4-207ENST00000470763 COPS4Q9BT78 406 aa13.46□□□□□ -0.25
NPHP4-207ENST00000470763 CLPBQ9H078 707 aa13.46□□□□□ -0.25
NPHP4-207ENST00000470763 MROH6A6NGR9 719 aa13.46□□□□□ -0.26
NPHP4-207ENST00000470763 LDB2O43679 373 aa13.46□□□□□ -0.26
NPHP4-207ENST00000470763 TLL1O43897 1013 aa13.46□□□□□ -0.26
NPHP4-207ENST00000470763 MYCLP1P12525 358 aaPredicted RBP13.46□□□□□ -0.26
NPHP4-207ENST00000470763 HOXA9P31269 272 aa13.46□□□□□ -0.26
NPHP4-207ENST00000470763 PIK3CGP48736 1102 aa13.46□□□□□ -0.26
NPHP4-207ENST00000470763 CRISP3P54108 245 aa13.46□□□□□ -0.26
NPHP4-207ENST00000470763 CXCR4P61073 352 aa13.46□□□□□ -0.26
NPHP4-207ENST00000470763 RPL38P63173 70 aaKnown RBP13.46□□□□□ -0.26
NPHP4-207ENST00000470763 SLC10A7Q0GE19 358 aa13.46□□□□□ -0.26
NPHP4-207ENST00000470763 C18orf21Q32NC0 220 aaPredicted RBP13.46□□□□□ -0.26
NPHP4-207ENST00000470763 SHQ1Q6PI26 577 aaKnown RBP13.46□□□□□ -0.26
NPHP4-207ENST00000470763 MILR1Q7Z6M3 343 aa13.46□□□□□ -0.26
NPHP4-207ENST00000470763 SIMC1Q8NDZ2 872 aa13.46□□□□□ -0.26
NPHP4-207ENST00000470763 OR56A4Q8NGH8 313 aa13.46□□□□□ -0.26
NPHP4-207ENST00000470763 CLHC1Q8NHS4 586 aa13.46□□□□□ -0.26
NPHP4-207ENST00000470763 RANGRFQ9HD47 186 aaPredicted RBP13.46□□□□□ -0.26
NPHP4-207ENST00000470763 KIF17Q9P2E2 1029 aa13.46□□□□□ -0.26
NPHP4-207ENST00000470763 UXTQ9UBK9 157 aaPredicted RBP13.46□□□□□ -0.26
NPHP4-207ENST00000470763 ZNF112Q9UJU3 913 aa13.46□□□□□ -0.26
NPHP4-207ENST00000470763 ZSWIM8A7E2V4 1837 aa13.46□□□□□ -0.26
NPHP4-207ENST00000470763 TNRC18O15417 2968 aaPredicted RBP13.45□□□□□ -0.26
NPHP4-207ENST00000470763 J3KR12 359 aa13.45□□□□□ -0.26
NPHP4-207ENST00000470763 ANKRD28O15084 1053 aa13.45□□□□□ -0.26
NPHP4-207ENST00000470763 PAGE1O75459 146 aa13.45□□□□□ -0.26
NPHP4-207ENST00000470763 SCELO95171 688 aa13.45□□□□□ -0.26
NPHP4-207ENST00000470763 HSMCR30P0CW71 290 aa13.45□□□□□ -0.26
NPHP4-207ENST00000470763 AZGP1P25311 298 aaKnown RBP13.45□□□□□ -0.26
NPHP4-207ENST00000470763 KEAP1Q14145 624 aa13.45□□□□□ -0.26
NPHP4-207ENST00000470763 SPANXN4Q5MJ08 99 aa13.45□□□□□ -0.26
NPHP4-207ENST00000470763 LBX2Q6XYB7 198 aa13.45□□□□□ -0.26
NPHP4-207ENST00000470763 BHLHA9Q7RTU4 235 aa13.45□□□□□ -0.26
NPHP4-207ENST00000470763 PGBD5Q8N414 524 aa13.45□□□□□ -0.26
NPHP4-207ENST00000470763 PCED1BQ96HM7 432 aa13.45□□□□□ -0.26
NPHP4-207ENST00000470763 SLC25A51Q9H1U9 297 aa13.45□□□□□ -0.26
NPHP4-207ENST00000470763 RUBCNLQ9H714 662 aa13.45□□□□□ -0.26
NPHP4-207ENST00000470763 ARNT2Q9HBZ2 717 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms