RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 GNPTGQ9UJJ9 305 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 UTS2RQ9UKP6 389 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 SLC22A14Q9Y267 594 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 GPC6Q9Y625 555 aaPredicted RBP9.22□□□□□ -0.93
TOP3A-203ENST00000469739 EFEMP2O95967 443 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 GLUD1P00367 558 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 OCM2P0CE71 109 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 OCMP0CE72 109 aaPredicted RBP9.22□□□□□ -0.93
TOP3A-203ENST00000469739 HOXB8P17481 243 aaPredicted RBP9.22□□□□□ -0.93
TOP3A-203ENST00000469739 SNRPD1P62314 119 aaKnown RBP9.22□□□□□ -0.93
TOP3A-203ENST00000469739 B4GALNT1Q00973 533 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 PGS1Q32NB8 556 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 PYCR3Q53H96 274 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 TCEAL5Q5H9L2 206 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 TMEM215Q68D42 235 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 ANKRD34AQ69YU3 496 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 ANKRD26P1Q6NSI1 321 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 UBE2R2Q712K3 238 aaPredicted RBP9.22□□□□□ -0.93
TOP3A-203ENST00000469739 CMTR2Q8IYT2 770 aaKnown RBP9.22□□□□□ -0.93
TOP3A-203ENST00000469739 LIX1Q8N485 282 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 FAM47BQ8NA70 645 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 OR10A6Q8NH74 314 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 PNPT1Q8TCS8 783 aaKnown RBP9.22□□□□□ -0.93
TOP3A-203ENST00000469739 TMIGD2Q96BF3 282 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 ITPKCQ96DU7 683 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 FBXL20Q96IG2 436 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 RIC8BQ9NVN3 520 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 U3KQV3 271 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 WASH3PC4AMC7 463 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.22□□□□□ -0.93
TOP3A-203ENST00000469739 KPNA3O00505 521 aaPredicted RBP9.22□□□□□ -0.93
TOP3A-203ENST00000469739 ULK1O75385 1050 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 WDR47O94967 919 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 FAM58BPP0C7Q3 252 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 ZNF23P17027 643 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 DGKAP23743 735 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 TACR1P25103 407 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 CTNNB1P35222 781 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 VIPR2P41587 438 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 RECQLP46063 649 aaPredicted RBP9.22□□□□□ -0.93
TOP3A-203ENST00000469739 CDK9P50750 372 aaKnown RBP9.22□□□□□ -0.93
TOP3A-203ENST00000469739 CLCN2P51788 898 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 NUP107P57740 925 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 ERVK-8P63133 956 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 TRAF3Q13114 568 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 PRKG2Q13237 762 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 ZXDCQ2QGD7 858 aaPredicted RBP9.22□□□□□ -0.93
TOP3A-203ENST00000469739 ELMSAN1Q6PJG2 1045 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 LPCAT2Q7L5N7 544 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 TMC8Q8IU68 726 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 SFTPA1Q8IWL2 248 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 RGL4Q8IZJ4 473 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 HS3ST5Q8IZT8 346 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 FAM86B1Q8N7N1 296 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 ACDQ96AP0 544 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 TMEM125Q96AQ2 219 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 ZNF689Q96CS4 500 aaPredicted RBP9.22□□□□□ -0.93
TOP3A-203ENST00000469739 MED8Q96G25 268 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 ASB2Q96Q27 587 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 NEURL2Q9BR09 285 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 ACTL8Q9H568 366 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 IKZF5Q9H5V7 419 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 RPF2Q9H7B2 306 aaKnown RBP9.22□□□□□ -0.93
TOP3A-203ENST00000469739 RAB26Q9ULW5 256 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 PRKAB1Q9Y478 270 aa9.22□□□□□ -0.93
TOP3A-203ENST00000469739 LTBP2Q14767 1821 aa9.21□□□□□ -0.93
TOP3A-203ENST00000469739 STX16O14662 325 aa9.21□□□□□ -0.93
TOP3A-203ENST00000469739 LEFTY1O75610 366 aa9.21□□□□□ -0.93
TOP3A-203ENST00000469739 XPAP23025 273 aaPredicted RBP9.21□□□□□ -0.93
TOP3A-203ENST00000469739 S100A1P23297 94 aa9.21□□□□□ -0.93
TOP3A-203ENST00000469739 PSMA4P25789 261 aaKnown RBP9.21□□□□□ -0.93
TOP3A-203ENST00000469739 LAPTM4AQ15012 233 aa9.21□□□□□ -0.93
TOP3A-203ENST00000469739 CCSMST1Q4G0I0 132 aa9.21□□□□□ -0.93
TOP3A-203ENST00000469739 GPRC6AQ5T6X5 926 aa9.21□□□□□ -0.93
TOP3A-203ENST00000469739 GCNT7Q6ZNI0 430 aa9.21□□□□□ -0.93
TOP3A-203ENST00000469739 CLEC4FQ8N1N0 589 aa9.21□□□□□ -0.93
TOP3A-203ENST00000469739 STK40Q8N2I9 435 aa9.21□□□□□ -0.93
TOP3A-203ENST00000469739 ZNF786Q8N393 782 aa9.21□□□□□ -0.93
TOP3A-203ENST00000469739 ADCY4Q8NFM4 1077 aa9.21□□□□□ -0.93
TOP3A-203ENST00000469739 ELMO1Q92556 727 aa9.21□□□□□ -0.93
TOP3A-203ENST00000469739 NCLNQ969V3 563 aa9.21□□□□□ -0.93
TOP3A-203ENST00000469739 MTERF1Q99551 399 aaKnown RBP9.21□□□□□ -0.93
TOP3A-203ENST00000469739 NRTNQ99748 197 aa9.21□□□□□ -0.93
TOP3A-203ENST00000469739 EFHD1Q9BUP0 239 aa9.21□□□□□ -0.93
TOP3A-203ENST00000469739 SLC6A13Q9NSD5 602 aa9.21□□□□□ -0.93
TOP3A-203ENST00000469739 VAPAQ9P0L0 249 aa9.21□□□□□ -0.93
TOP3A-203ENST00000469739 EI24O14681 340 aa9.21□□□□□ -0.94
TOP3A-203ENST00000469739 EPB42P16452 691 aa9.21□□□□□ -0.94
TOP3A-203ENST00000469739 IL10P22301 178 aa9.21□□□□□ -0.94
TOP3A-203ENST00000469739 SLC7A1P30825 629 aa9.21□□□□□ -0.94
TOP3A-203ENST00000469739 ZFP36L2P47974 494 aaKnown RBP9.21□□□□□ -0.94
TOP3A-203ENST00000469739 EIF2B2P49770 351 aaKnown RBP9.21□□□□□ -0.94
TOP3A-203ENST00000469739 CLCN4P51793 760 aa9.21□□□□□ -0.94
TOP3A-203ENST00000469739 IL1RL1Q01638 556 aa9.21□□□□□ -0.94
TOP3A-203ENST00000469739 GRIN2CQ14957 1233 aa9.21□□□□□ -0.94
TOP3A-203ENST00000469739 INAQ16352 499 aa9.21□□□□□ -0.94
TOP3A-203ENST00000469739 PTCHD3Q3KNS1 767 aa9.21□□□□□ -0.94
TOP3A-203ENST00000469739 TXNDC11Q6PKC3 985 aa9.21□□□□□ -0.94
TOP3A-203ENST00000469739 TMC5Q6UXY8 1006 aa9.21□□□□□ -0.94
TOP3A-203ENST00000469739 HSD11B1LQ7Z5J1 315 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms