RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 HCAR3P49019 387 aa6.25□□□□□ -1.41
PTCD3-208ENST00000469585 PLK1P53350 603 aa6.25□□□□□ -1.41
PTCD3-208ENST00000469585 RHOAP61586 193 aa6.25□□□□□ -1.41
PTCD3-208ENST00000469585 CREB5Q02930 508 aa6.25□□□□□ -1.41
PTCD3-208ENST00000469585 PTP4A2Q12974 167 aa6.25□□□□□ -1.41
PTCD3-208ENST00000469585 KLF10Q13118 480 aa6.25□□□□□ -1.41
PTCD3-208ENST00000469585 TFDP2Q14188 446 aa6.25□□□□□ -1.41
PTCD3-208ENST00000469585 RFTN1Q14699 578 aaPredicted RBP6.25□□□□□ -1.41
PTCD3-208ENST00000469585 DLG2Q15700 870 aa6.25□□□□□ -1.41
PTCD3-208ENST00000469585 CYP1B1Q16678 543 aa6.25□□□□□ -1.41
PTCD3-208ENST00000469585 SMTNL2Q2TAL5 461 aa6.25□□□□□ -1.41
PTCD3-208ENST00000469585 HNRNPA1L2Q32P51 320 aaKnown RBP6.25□□□□□ -1.41
PTCD3-208ENST00000469585 GRAMD1BQ3KR37 738 aa6.25□□□□□ -1.41
PTCD3-208ENST00000469585 AASDHQ4L235 1098 aaPredicted RBP6.25□□□□□ -1.41
PTCD3-208ENST00000469585 PCSK4Q6UW60 755 aa6.25□□□□□ -1.41
PTCD3-208ENST00000469585 RFX8Q6ZV50 586 aa6.25□□□□□ -1.41
PTCD3-208ENST00000469585 ADIPOR2Q86V24 386 aa6.25□□□□□ -1.41
PTCD3-208ENST00000469585 ZSCAN30Q86W11 494 aa6.25□□□□□ -1.41
PTCD3-208ENST00000469585 CACUL1Q86Y37 369 aa6.25□□□□□ -1.41
PTCD3-208ENST00000469585 METTL25Q8N6Q8 603 aa6.25□□□□□ -1.41
PTCD3-208ENST00000469585 CCDC185Q8N715 623 aa6.25□□□□□ -1.41
PTCD3-208ENST00000469585 ZBTB44Q8NCP5 570 aa6.25□□□□□ -1.41
PTCD3-208ENST00000469585 XAGE5Q8WWM1 108 aa6.25□□□□□ -1.41
PTCD3-208ENST00000469585 SORCS1Q8WY21 1168 aa6.25□□□□□ -1.41
PTCD3-208ENST00000469585 IGSF8Q969P0 613 aa6.25□□□□□ -1.41
PTCD3-208ENST00000469585 HAUS1Q96CS2 278 aa6.25□□□□□ -1.41
PTCD3-208ENST00000469585 RBM41Q96IZ5 413 aaKnown RBP6.25□□□□□ -1.41
PTCD3-208ENST00000469585 PRMT1Q99873 361 aaKnown RBP6.25□□□□□ -1.41
PTCD3-208ENST00000469585 SNRNP25Q9BV90 132 aaKnown RBP6.25□□□□□ -1.41
PTCD3-208ENST00000469585 C1QTNF7Q9BXJ2 289 aa6.25□□□□□ -1.41
PTCD3-208ENST00000469585 FBRSL1Q9HCM7 1045 aaKnown RBP6.25□□□□□ -1.41
PTCD3-208ENST00000469585 OBP2BQ9NPH6 170 aa6.25□□□□□ -1.41
PTCD3-208ENST00000469585 TRIM36Q9NQ86 728 aa6.25□□□□□ -1.41
PTCD3-208ENST00000469585 UBA2Q9UBT2 640 aaPredicted RBP6.25□□□□□ -1.41
PTCD3-208ENST00000469585 IL36AQ9UHA7 158 aa6.25□□□□□ -1.41
PTCD3-208ENST00000469585 DTNAQ9Y4J8 743 aa6.25□□□□□ -1.41
PTCD3-208ENST00000469585 KMT2EQ8IZD2 1858 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 TBC1D3DA0A087WVF3 549 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 TBC1D3IA0A087WXS9 549 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 TBC1D3EA0A087X179 549 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 TBC1D3KA0A087X1G2 549 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 A0A1W2PQ67 120 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 TBC1D3FA6NER0 549 aaPredicted RBP6.24□□□□□ -1.41
PTCD3-208ENST00000469585 FAM47DPA6NHR8 397 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 AQP12BA6NM10 295 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 LINC00473A8K010 186 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 TBC1D3LB9A6J9 549 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 PROB1E7EW31 1015 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 PIP5K1BO14986 540 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 SLC7A4O43246 635 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 PSTPIP1O43586 416 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 CCNT2O60583 730 aaKnown RBP6.24□□□□□ -1.41
PTCD3-208ENST00000469585 SNX2O60749 519 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 LRCH4O75427 683 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 SKAP2O75563 359 aaPredicted RBP6.24□□□□□ -1.41
PTCD3-208ENST00000469585 TJP3O95049 919 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 POP4O95707 220 aaKnown RBP6.24□□□□□ -1.41
PTCD3-208ENST00000469585 CCDC175P0C221 793 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 TBC1D3HP0C7X1 549 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 HLA-EP13747 358 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 GABRG2P18507 467 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 SERPINA4P29622 427 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 SERPINH1P50454 418 aaKnown RBP6.24□□□□□ -1.41
PTCD3-208ENST00000469585 SGSHP51688 502 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 C21orf59P57076 290 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 POLR2LP62875 67 aaKnown RBP6.24□□□□□ -1.41
PTCD3-208ENST00000469585 SIM1P81133 766 aaPredicted RBP6.24□□□□□ -1.41
PTCD3-208ENST00000469585 ARHGAP8P85298 464 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 NSUN2Q08J23 767 aaKnown RBP eCLIP6.24□□□□□ -1.41
PTCD3-208ENST00000469585 GPS1Q13098 491 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 TBX2Q13207 712 aaPredicted RBP6.24□□□□□ -1.41
PTCD3-208ENST00000469585 EIF4EBP2Q13542 120 aaPredicted RBP6.24□□□□□ -1.41
PTCD3-208ENST00000469585 ATP1A4Q13733 1029 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 SPARCL1Q14515 664 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 CLCA4Q14CN2 919 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 CST6Q15828 149 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 LPAL2Q16609 132 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 PFKFB4Q16877 469 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 C5orf22Q49AR2 442 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 ALFQ53S48 1182 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 PLAC9Q5JTB6 97 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 LRRC38Q5VT99 294 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 TBC1D3GQ6DHY5 549 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 TBC1D3CQ6IPX1 549 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 CCDC70Q6NSX1 233 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 C22orf39Q6P5X5 142 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 DNAAF5Q86Y56 855 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 RFX6Q8HWS3 928 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 MMAAQ8IVH4 418 aaKnown RBP6.24□□□□□ -1.41
PTCD3-208ENST00000469585 TBC1D3Q8IZP1 549 aaPredicted RBP6.24□□□□□ -1.41
PTCD3-208ENST00000469585 APCDD1Q8J025 514 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 HDDC3Q8N4P3 179 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 TC2NQ8N9U0 490 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 CCNYQ8ND76 341 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 CADM4Q8NFZ8 388 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 RP9Q8TA86 221 aaKnown RBP6.24□□□□□ -1.41
PTCD3-208ENST00000469585 SUN3Q8TAQ9 357 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 KIAA1524Q8TCG1 905 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 ISG20Q96AZ6 181 aaKnown RBP6.24□□□□□ -1.41
PTCD3-208ENST00000469585 CTHRC1Q96CG8 243 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms