RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 EGFP01133 1207 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 C7P10643 843 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 ACADMP11310 421 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 MYCLP1P12525 358 aaPredicted RBP9.1□□□□□ -0.95
SMC1A-205ENST00000469129 JUPP14923 745 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 ZNF8P17098 575 aaPredicted RBP9.1□□□□□ -0.95
SMC1A-205ENST00000469129 HNF4AP41235 474 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 GDF5P43026 501 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 BDKRB1P46663 353 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 HTR6P50406 440 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 MTTPP55157 894 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 ACTR3P61158 418 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 TFF2Q03403 129 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 ABRQ12979 859 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 CSTF3Q12996 717 aaKnown RBP9.1□□□□□ -0.95
SMC1A-205ENST00000469129 GRB7Q14451 532 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 KPNB1Q14974 876 aaKnown RBP9.1□□□□□ -0.95
SMC1A-205ENST00000469129 IRF4Q15306 451 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 SPATS1Q496A3 300 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 C2orf27AQ580R0 203 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.1□□□□□ -0.95
SMC1A-205ENST00000469129 TJAP1Q5JTD0 557 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 C6orf136Q5SQH8 315 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 C10orf62Q5T681 223 aaPredicted RBP9.1□□□□□ -0.95
SMC1A-205ENST00000469129 CACHD1Q5VU97 1274 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 LIPJQ5W064 366 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 PGM2L1Q6PCE3 622 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 AAGABQ6PD74 315 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 DOK6Q6PKX4 331 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 AGTRAPQ6RW13 159 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 CRTC3Q6UUV7 619 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 RIPOR1Q6ZS17 1223 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 PDZD3Q86UT5 571 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 AMZ2Q86W34 360 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 MYLK4Q86YV6 388 aaPredicted RBP9.1□□□□□ -0.95
SMC1A-205ENST00000469129 CFAP206Q8IYR0 622 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 FBXW8Q8N3Y1 598 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 L3MBTL4Q8NA19 623 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 PHC3Q8NDX5 983 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 DENND6BQ8NEG7 585 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 HMGCLL1Q8TB92 370 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 EZH1Q92800 747 aaPredicted RBP9.1□□□□□ -0.95
SMC1A-205ENST00000469129 USP7Q93009 1102 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 HLA-CQ95604 372 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 REPS1Q96D71 796 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 ZBTB18Q99592 522 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 TIMM29Q9BSF4 260 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 TEX101Q9BY14 249 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 FBRSL1Q9HCM7 1045 aaKnown RBP9.1□□□□□ -0.95
SMC1A-205ENST00000469129 GID8Q9NWU2 228 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 STOX2Q9P2F5 926 aaPredicted RBP9.1□□□□□ -0.95
SMC1A-205ENST00000469129 ZNF490Q9ULM2 529 aaPredicted RBP9.1□□□□□ -0.95
SMC1A-205ENST00000469129 GPR45Q9Y5Y3 372 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 VCANP13611 3396 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 C15orf38-AP3S2A0A0A6YYH1 394 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 FAM234BA2RU67 622 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 LOC730098B7Z3J9 87 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 NPIPB8E9PQR5 432 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 TRIM38O00635 465 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 FFAR3O14843 346 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 LSM1O15116 133 aaKnown RBP9.09□□□□□ -0.95
SMC1A-205ENST00000469129 GPR42O15529 346 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 MBTPS2O43462 519 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 ENTPD5O75356 428 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 SLC22A3O75751 556 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 POP7O75817 140 aaKnown RBP9.09□□□□□ -0.95
SMC1A-205ENST00000469129 STAMBPO95630 424 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 SLC35G4P0C7Q5 338 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 HSD3B1P14060 373 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 ACPPP15309 386 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 KELP23276 732 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 ME2P23368 584 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 PRPH2P23942 346 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 HSD3B2P26439 372 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 HSD17B2P37059 387 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 HALP42357 657 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 GNPDA1P46926 289 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 ADPRHP54922 357 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 PSME3P61289 254 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 AP2B1P63010 937 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 RPL38P63173 70 aaKnown RBP9.09□□□□□ -0.95
SMC1A-205ENST00000469129 IRF8Q02556 426 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 PCDH1Q08174 1060 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 DMPKQ09013 629 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 RCAN2Q14206 197 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 ABRAXAS2Q15018 415 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 WSCD2Q2TBF2 565 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 AP5B1Q2VPB7 878 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 PLA2G4EQ3MJ16 856 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 TMEM259Q4ZIN3 620 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 TCHHL1Q5QJ38 904 aaPredicted RBP9.09□□□□□ -0.95
SMC1A-205ENST00000469129 GRHL2Q6ISB3 625 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 CAPN13Q6MZZ7 669 aaPredicted RBP9.09□□□□□ -0.95
SMC1A-205ENST00000469129 KIAA1211LQ6NV74 962 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 PAOXQ6QHF9 649 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 BLOC1S3Q6QNY0 202 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 PRR23BQ6ZRT6 265 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 LPCAT2Q7L5N7 544 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 TRIM46Q7Z4K8 759 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 ARPINQ7Z6K5 226 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms