RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 CERS6Q6ZMG9 384 aa14.09□□□□□ -0.15
COL27A1-203ENST00000468565 TRABD2AQ86V40 505 aa14.09□□□□□ -0.15
COL27A1-203ENST00000468565 ANKMY2Q8IV38 441 aa14.09□□□□□ -0.15
COL27A1-203ENST00000468565 CLDN19Q8N6F1 224 aa14.09□□□□□ -0.15
COL27A1-203ENST00000468565 LSM14AQ8ND56 463 aaKnown RBP14.09□□□□□ -0.15
COL27A1-203ENST00000468565 ELAC2Q9BQ52 826 aaKnown RBP14.09□□□□□ -0.15
COL27A1-203ENST00000468565 OR52A5Q9H2C5 316 aa14.09□□□□□ -0.15
COL27A1-203ENST00000468565 SEMA5BQ9P283 1151 aa14.09□□□□□ -0.15
COL27A1-203ENST00000468565 PSMC3IPQ9P2W1 217 aaPredicted RBP14.09□□□□□ -0.15
COL27A1-203ENST00000468565 TCP11X1B4DZS4 312 aa14.08□□□□□ -0.16
COL27A1-203ENST00000468565 KRT15P19012 456 aa14.08□□□□□ -0.16
COL27A1-203ENST00000468565 GCAP28676 217 aa14.08□□□□□ -0.16
COL27A1-203ENST00000468565 NPY2RP49146 381 aa14.08□□□□□ -0.16
COL27A1-203ENST00000468565 GTF2A1P52655 376 aaPredicted RBP14.08□□□□□ -0.16
COL27A1-203ENST00000468565 RHDQ02161 417 aa14.08□□□□□ -0.16
COL27A1-203ENST00000468565 ACTN3Q08043 901 aaPredicted RBP14.08□□□□□ -0.16
COL27A1-203ENST00000468565 MANEAQ5SRI9 462 aa14.08□□□□□ -0.16
COL27A1-203ENST00000468565 IRGCQ6NXR0 463 aa14.08□□□□□ -0.16
COL27A1-203ENST00000468565 CAPN12Q6ZSI9 719 aa14.08□□□□□ -0.16
COL27A1-203ENST00000468565 PALM2Q8IXS6 379 aa14.08□□□□□ -0.16
COL27A1-203ENST00000468565 OR4L1Q8NH43 312 aa14.08□□□□□ -0.16
COL27A1-203ENST00000468565 KLHL6Q8WZ60 621 aa14.08□□□□□ -0.16
COL27A1-203ENST00000468565 MAGEB18Q96M61 343 aa14.08□□□□□ -0.16
COL27A1-203ENST00000468565 ZNF778Q96MU6 729 aa14.08□□□□□ -0.16
COL27A1-203ENST00000468565 CD180Q99467 661 aa14.08□□□□□ -0.16
COL27A1-203ENST00000468565 BFARQ9NZS9 450 aa14.08□□□□□ -0.16
COL27A1-203ENST00000468565 PRSS21Q9Y6M0 314 aa14.08□□□□□ -0.16
COL27A1-203ENST00000468565 CAPN7Q9Y6W3 813 aa14.08□□□□□ -0.16
COL27A1-203ENST00000468565 OR5K3A6NET4 321 aa14.07□□□□□ -0.16
COL27A1-203ENST00000468565 CCT8L1PA6NM43 557 aa14.07□□□□□ -0.16
COL27A1-203ENST00000468565 FOXO6A8MYZ6 492 aa14.07□□□□□ -0.16
COL27A1-203ENST00000468565 F8W8V4 182 aa14.07□□□□□ -0.16
COL27A1-203ENST00000468565 H0YHG0 523 aa14.07□□□□□ -0.16
COL27A1-203ENST00000468565 IFRD1O00458 451 aaPredicted RBP14.07□□□□□ -0.16
COL27A1-203ENST00000468565 LIN7AO14910 233 aaPredicted RBP14.07□□□□□ -0.16
COL27A1-203ENST00000468565 FTH1P02794 183 aa14.07□□□□□ -0.16
COL27A1-203ENST00000468565 MAGEA6P43360 314 aa14.07□□□□□ -0.16
COL27A1-203ENST00000468565 SLC18A1P54219 525 aa14.07□□□□□ -0.16
COL27A1-203ENST00000468565 PRAMEP78395 509 aa14.07□□□□□ -0.16
COL27A1-203ENST00000468565 BBS9Q3SYG4 887 aa14.07□□□□□ -0.16
COL27A1-203ENST00000468565 LACTB2Q53H82 288 aaPredicted RBP14.07□□□□□ -0.16
COL27A1-203ENST00000468565 FASTKD1Q53R41 847 aaKnown RBP14.07□□□□□ -0.16
COL27A1-203ENST00000468565 CACHD1Q5VU97 1274 aa14.07□□□□□ -0.16
COL27A1-203ENST00000468565 ZNF534Q76KX8 674 aa14.07□□□□□ -0.16
COL27A1-203ENST00000468565 OOSP2Q86WS3 158 aa14.07□□□□□ -0.16
COL27A1-203ENST00000468565 BBC3Q96PG8 261 aaPredicted RBP14.07□□□□□ -0.16
COL27A1-203ENST00000468565 SMC6Q96SB8 1091 aa14.07□□□□□ -0.16
COL27A1-203ENST00000468565 C2orf72A6NCS6 295 aa14.07□□□□□ -0.16
COL27A1-203ENST00000468565 ERVH48-1M5A8F1 160 aa14.07□□□□□ -0.16
COL27A1-203ENST00000468565 POLR1CO15160 346 aaPredicted RBP14.07□□□□□ -0.16
COL27A1-203ENST00000468565 ATXN7O15265 892 aaPredicted RBP14.07□□□□□ -0.16
COL27A1-203ENST00000468565 PRPF4O43172 522 aaKnown RBP eCLIP14.07□□□□□ -0.161e-9■■■□□ 17.4
COL27A1-203ENST00000468565 EFSO43281 561 aa14.07□□□□□ -0.16
COL27A1-203ENST00000468565 RASSF9O75901 435 aa14.07□□□□□ -0.16
COL27A1-203ENST00000468565 TMEM63AO94886 807 aa14.07□□□□□ -0.16
COL27A1-203ENST00000468565 OR56A5P0C7T3 313 aa14.07□□□□□ -0.16
COL27A1-203ENST00000468565 PPARGP37231 505 aaPredicted RBP14.07□□□□□ -0.16
COL27A1-203ENST00000468565 SESN2P58004 480 aaPredicted RBP14.07□□□□□ -0.16
COL27A1-203ENST00000468565 GPX6P59796 221 aa14.07□□□□□ -0.16
COL27A1-203ENST00000468565 MPP2Q14168 576 aa14.07□□□□□ -0.16
COL27A1-203ENST00000468565 ARMC3Q5W041 872 aa14.07□□□□□ -0.16
COL27A1-203ENST00000468565 ICE2Q659A1 982 aa14.07□□□□□ -0.16
COL27A1-203ENST00000468565 LRRC8BQ6P9F7 803 aa14.07□□□□□ -0.16
COL27A1-203ENST00000468565 FAM92BQ6ZTR7 304 aa14.07□□□□□ -0.16
COL27A1-203ENST00000468565 FBXO36Q8NEA4 188 aa14.07□□□□□ -0.16
COL27A1-203ENST00000468565 ACVR1CQ8NER5 493 aa14.07□□□□□ -0.16
COL27A1-203ENST00000468565 OR6P1Q8NGX9 317 aa14.07□□□□□ -0.16
COL27A1-203ENST00000468565 JPH3Q8WXH2 748 aaPredicted RBP14.07□□□□□ -0.16
COL27A1-203ENST00000468565 NKD1Q969G9 470 aa14.07□□□□□ -0.16
COL27A1-203ENST00000468565 CTRCQ99895 268 aa14.07□□□□□ -0.16
COL27A1-203ENST00000468565 SPRY4Q9C004 299 aa14.07□□□□□ -0.16
COL27A1-203ENST00000468565 MVB12BQ9H7P6 319 aa14.07□□□□□ -0.16
COL27A1-203ENST00000468565 MRM3Q9HC36 420 aaKnown RBP14.07□□□□□ -0.16
COL27A1-203ENST00000468565 APMAPQ9HDC9 416 aa14.07□□□□□ -0.16
COL27A1-203ENST00000468565 CHRAC1Q9NRG0 131 aa14.07□□□□□ -0.16
COL27A1-203ENST00000468565 TREX1Q9NSU2 369 aa14.07□□□□□ -0.16
COL27A1-203ENST00000468565 TK2O00142 265 aa14.06□□□□□ -0.16
COL27A1-203ENST00000468565 KIF1CO43896 1103 aaKnown RBP14.06□□□□□ -0.16
COL27A1-203ENST00000468565 BANF1O75531 89 aa14.06□□□□□ -0.16
COL27A1-203ENST00000468565 SEPHS1P49903 392 aa14.06□□□□□ -0.16
COL27A1-203ENST00000468565 PLOD1Q02809 727 aaPredicted RBP14.06□□□□□ -0.16
COL27A1-203ENST00000468565 KRT33BQ14525 404 aa14.06□□□□□ -0.16
COL27A1-203ENST00000468565 KCNJ11Q14654 390 aa14.06□□□□□ -0.16
COL27A1-203ENST00000468565 MSS51Q4VC12 460 aa14.06□□□□□ -0.16
COL27A1-203ENST00000468565 AARS2Q5JTZ9 985 aaKnown RBP14.06□□□□□ -0.16
COL27A1-203ENST00000468565 CYB5D1Q6P9G0 228 aa14.06□□□□□ -0.16
COL27A1-203ENST00000468565 C3orf62Q6ZUJ4 267 aa14.06□□□□□ -0.16
COL27A1-203ENST00000468565 KMT5CQ86Y97 462 aa14.06□□□□□ -0.16
COL27A1-203ENST00000468565 CARFQ8N187 725 aa14.06□□□□□ -0.16
COL27A1-203ENST00000468565 CCT6BQ92526 530 aa14.06□□□□□ -0.16
COL27A1-203ENST00000468565 PLCD4Q9BRC7 762 aa14.06□□□□□ -0.16
COL27A1-203ENST00000468565 ACSS3Q9H6R3 686 aa14.06□□□□□ -0.16
COL27A1-203ENST00000468565 MLXIPLQ9NP71 852 aa14.06□□□□□ -0.16
COL27A1-203ENST00000468565 HRASLS2Q9NWW9 162 aa14.06□□□□□ -0.16
COL27A1-203ENST00000468565 PILRAQ9UKJ1 303 aa14.06□□□□□ -0.16
COL27A1-203ENST00000468565 TMEM184BQ9Y519 407 aaPredicted RBP14.06□□□□□ -0.16
COL27A1-203ENST00000468565 TCRBV7S3A2A0A539 114 aa14.05□□□□□ -0.16
COL27A1-203ENST00000468565 TLCD2A6NGC4 264 aa14.05□□□□□ -0.16
COL27A1-203ENST00000468565 SNX3O60493 162 aa14.05□□□□□ -0.16
COL27A1-203ENST00000468565 RAD1O60671 282 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms