RNA–Protein interactions for RNA: ENST00000468479.5

FDPS-207, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 938 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-207ENST00000468479 C10orf67Q8IYJ2 551 aa13.07□□□□□ -0.32
FDPS-207ENST00000468479 TEX9Q8N6V9 391 aa13.07□□□□□ -0.32
FDPS-207ENST00000468479 AGR3Q8TD06 166 aa13.07□□□□□ -0.32
FDPS-207ENST00000468479 TRPC4APQ8TEL6 797 aa13.07□□□□□ -0.32
FDPS-207ENST00000468479 BIRC7Q96CA5 298 aa13.07□□□□□ -0.32
FDPS-207ENST00000468479 C19orf60Q96EN9 201 aa13.07□□□□□ -0.32
FDPS-207ENST00000468479 TBC1D10AQ9BXI6 508 aa13.07□□□□□ -0.32
FDPS-207ENST00000468479 ZNF385DQ9H6B1 395 aa13.07□□□□□ -0.32
FDPS-207ENST00000468479 WDR55Q9H6Y2 383 aaPredicted RBP13.07□□□□□ -0.32
FDPS-207ENST00000468479 GAREM1Q9H706 876 aa13.07□□□□□ -0.32
FDPS-207ENST00000468479 FSCN3Q9NQT6 498 aa13.07□□□□□ -0.32
FDPS-207ENST00000468479 PCDHGB2Q9Y5G2 931 aa13.07□□□□□ -0.32
FDPS-207ENST00000468479 ASPMQ8IZT6 3477 aa13.07□□□□□ -0.32
FDPS-207ENST00000468479 E9PBE3 544 aa13.06□□□□□ -0.32
FDPS-207ENST00000468479 SGTAO43765 313 aa13.06□□□□□ -0.32
FDPS-207ENST00000468479 KLHL41O60662 606 aa13.06□□□□□ -0.32
FDPS-207ENST00000468479 OTCP00480 354 aa13.06□□□□□ -0.32
FDPS-207ENST00000468479 ENO1P06733 434 aaKnown RBP13.06□□□□□ -0.32
FDPS-207ENST00000468479 ANXA5P08758 320 aa13.06□□□□□ -0.32
FDPS-207ENST00000468479 HIST1H2AGP0C0S8 130 aaPredicted RBP13.06□□□□□ -0.32
FDPS-207ENST00000468479 HIST1H2ADP20671 130 aa13.06□□□□□ -0.32
FDPS-207ENST00000468479 CYP2A7P20853 494 aa13.06□□□□□ -0.32
FDPS-207ENST00000468479 EPHA3P29320 983 aa13.06□□□□□ -0.32
FDPS-207ENST00000468479 GPR1P46091 355 aa13.06□□□□□ -0.32
FDPS-207ENST00000468479 CDH13P55290 713 aa13.06□□□□□ -0.32
FDPS-207ENST00000468479 SIM1P81133 766 aaPredicted RBP13.06□□□□□ -0.32
FDPS-207ENST00000468479 TMEM115Q12893 351 aaPredicted RBP13.06□□□□□ -0.32
FDPS-207ENST00000468479 GTF2H3Q13889 308 aa13.06□□□□□ -0.32
FDPS-207ENST00000468479 UBAP2LQ14157 1087 aaKnown RBP13.06□□□□□ -0.32
FDPS-207ENST00000468479 NAA25Q14CX7 972 aa13.06□□□□□ -0.32
FDPS-207ENST00000468479 ZNF423Q2M1K9 1284 aa13.06□□□□□ -0.32
FDPS-207ENST00000468479 HLA-BQ31612 363 aa13.06□□□□□ -0.32
FDPS-207ENST00000468479 NXNQ6DKJ4 435 aa13.06□□□□□ -0.32
FDPS-207ENST00000468479 RNF165Q6ZSG1 346 aa13.06□□□□□ -0.32
FDPS-207ENST00000468479 NAXDQ8IW45 347 aa13.06□□□□□ -0.32
FDPS-207ENST00000468479 OR14C36Q8NHC7 312 aa13.06□□□□□ -0.32
FDPS-207ENST00000468479 GLMNQ92990 594 aa13.06□□□□□ -0.32
FDPS-207ENST00000468479 MOCOSQ96EN8 888 aa13.06□□□□□ -0.32
FDPS-207ENST00000468479 CCDC97Q96F63 343 aaPredicted RBP13.06□□□□□ -0.32
FDPS-207ENST00000468479 PRR11Q96HE9 360 aaPredicted RBP13.06□□□□□ -0.32
FDPS-207ENST00000468479 HIST1H2AHQ96KK5 128 aa13.06□□□□□ -0.32
FDPS-207ENST00000468479 LINC00615Q96LM1 132 aaPredicted RBP13.06□□□□□ -0.32
FDPS-207ENST00000468479 MAGEB10Q96LZ2 347 aaPredicted RBP13.06□□□□□ -0.32
FDPS-207ENST00000468479 HIST1H2AJQ99878 128 aa13.06□□□□□ -0.32
FDPS-207ENST00000468479 H2AFJQ9BTM1 129 aa13.06□□□□□ -0.32
FDPS-207ENST00000468479 SHCBP1LQ9BZQ2 653 aa13.06□□□□□ -0.32
FDPS-207ENST00000468479 CD244Q9BZW8 370 aa13.06□□□□□ -0.32
FDPS-207ENST00000468479 TRIM39Q9HCM9 518 aa13.06□□□□□ -0.32
FDPS-207ENST00000468479 TM9SF3Q9HD45 589 aa13.06□□□□□ -0.32
FDPS-207ENST00000468479 ZMIZ1Q9ULJ6 1067 aa13.06□□□□□ -0.32
FDPS-207ENST00000468479 CNOT6Q9ULM6 557 aaKnown RBP13.06□□□□□ -0.32
FDPS-207ENST00000468479 GPR34Q9UPC5 381 aa13.06□□□□□ -0.32
FDPS-207ENST00000468479 ITM2BQ9Y287 266 aa13.06□□□□□ -0.32
FDPS-207ENST00000468479 GON4LQ3T8J9 2241 aa13.06□□□□□ -0.32
FDPS-207ENST00000468479 FASNP49327 2511 aaKnown RBP13.06□□□□□ -0.32
FDPS-207ENST00000468479 PLXNB3Q9ULL4 1909 aa13.05□□□□□ -0.32
FDPS-207ENST00000468479 TBC1D3DA0A087WVF3 549 aa13.05□□□□□ -0.32
FDPS-207ENST00000468479 TBC1D3IA0A087WXS9 549 aa13.05□□□□□ -0.32
FDPS-207ENST00000468479 TBC1D3EA0A087X179 549 aa13.05□□□□□ -0.32
FDPS-207ENST00000468479 TBC1D3KA0A087X1G2 549 aa13.05□□□□□ -0.32
FDPS-207ENST00000468479 C17orf113A0A1B0GUU1 675 aa13.05□□□□□ -0.32
FDPS-207ENST00000468479 A0A1B0GVT2 93 aa13.05□□□□□ -0.32
FDPS-207ENST00000468479 A0A1W2PPC4 97 aa13.05□□□□□ -0.32
FDPS-207ENST00000468479 TBC1D3FA6NER0 549 aaPredicted RBP13.05□□□□□ -0.32
FDPS-207ENST00000468479 B2RBV5 119 aa13.05□□□□□ -0.32
FDPS-207ENST00000468479 C1QTNF9BB2RNN3 333 aa13.05□□□□□ -0.32
FDPS-207ENST00000468479 TMEM233B4DJY2 109 aa13.05□□□□□ -0.32
FDPS-207ENST00000468479 GPR89AB7ZAQ6 455 aa13.05□□□□□ -0.32
FDPS-207ENST00000468479 TBC1D3LB9A6J9 549 aa13.05□□□□□ -0.32
FDPS-207ENST00000468479 LIN7AO14910 233 aaPredicted RBP13.05□□□□□ -0.32
FDPS-207ENST00000468479 FLRT2O43155 660 aa13.05□□□□□ -0.32
FDPS-207ENST00000468479 MMP20O60882 483 aa13.05□□□□□ -0.32
FDPS-207ENST00000468479 KATNA1O75449 491 aa13.05□□□□□ -0.32
FDPS-207ENST00000468479 TBC1D3HP0C7X1 549 aa13.05□□□□□ -0.32
FDPS-207ENST00000468479 C1QTNF9P0C862 333 aa13.05□□□□□ -0.32
FDPS-207ENST00000468479 GPR89BP0CG08 455 aa13.05□□□□□ -0.32
FDPS-207ENST00000468479 CD59P13987 128 aa13.05□□□□□ -0.32
FDPS-207ENST00000468479 CSNK1EP49674 416 aaKnown RBP13.05□□□□□ -0.32
FDPS-207ENST00000468479 ADPRHP54922 357 aa13.05□□□□□ -0.32
FDPS-207ENST00000468479 KCNJ2P63252 427 aa13.05□□□□□ -0.32
FDPS-207ENST00000468479 ELF3P78545 371 aaPredicted RBP13.05□□□□□ -0.32
FDPS-207ENST00000468479 HSPA14Q0VDF9 509 aa13.05□□□□□ -0.32
FDPS-207ENST00000468479 FOXC1Q12948 553 aa13.05□□□□□ -0.32
FDPS-207ENST00000468479 SQLEQ14534 574 aa13.05□□□□□ -0.32
FDPS-207ENST00000468479 MAPRE2Q15555 327 aa13.05□□□□□ -0.32
FDPS-207ENST00000468479 RBBP7Q16576 425 aa13.05□□□□□ -0.32
FDPS-207ENST00000468479 SYTL3Q4VX76 610 aa13.05□□□□□ -0.32
FDPS-207ENST00000468479 TBC1D3GQ6DHY5 549 aa13.05□□□□□ -0.32
FDPS-207ENST00000468479 TBC1D3CQ6IPX1 549 aa13.05□□□□□ -0.32
FDPS-207ENST00000468479 UNQ6494/PRO21346Q6UXR6 183 aa13.05□□□□□ -0.32
FDPS-207ENST00000468479 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.05□□□□□ -0.32
FDPS-207ENST00000468479 UBE2R2Q712K3 238 aaPredicted RBP13.05□□□□□ -0.32
FDPS-207ENST00000468479 LARP4Q71RC2 724 aaKnown RBP eCLIP13.05□□□□□ -0.32
FDPS-207ENST00000468479 TBC1D3Q8IZP1 549 aaPredicted RBP13.05□□□□□ -0.32
FDPS-207ENST00000468479 PELI3Q8N2H9 469 aa13.05□□□□□ -0.32
FDPS-207ENST00000468479 RASGEF1AQ8N9B8 481 aa13.05□□□□□ -0.32
FDPS-207ENST00000468479 RP9Q8TA86 221 aaKnown RBP13.05□□□□□ -0.32
FDPS-207ENST00000468479 C1orf216Q8TAB5 229 aa13.05□□□□□ -0.32
FDPS-207ENST00000468479 MCOLN3Q8TDD5 553 aa13.05□□□□□ -0.32
FDPS-207ENST00000468479 ATL1Q8WXF7 558 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms