RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 MAPK12P53778 367 aa3.96□□□□□ -1.78
SMC4-208ENST00000467468 UBASH3AP57075 661 aa3.96□□□□□ -1.78
SMC4-208ENST00000467468 DLK1P80370 383 aa3.96□□□□□ -1.78
SMC4-208ENST00000467468 ARF5P84085 180 aa3.96□□□□□ -1.78
SMC4-208ENST00000467468 PDE1BQ01064 536 aa3.96□□□□□ -1.78
SMC4-208ENST00000467468 TEFQ10587 303 aa3.96□□□□□ -1.78
SMC4-208ENST00000467468 PLA2G7Q13093 441 aa3.96□□□□□ -1.78
SMC4-208ENST00000467468 TNK1Q13470 666 aa3.96□□□□□ -1.78
SMC4-208ENST00000467468 TAZQ16635 292 aa3.96□□□□□ -1.78
SMC4-208ENST00000467468 TCTE1Q5JU00 501 aa3.96□□□□□ -1.78
SMC4-208ENST00000467468 SPOUT1Q5T280 376 aaKnown RBP3.96□□□□□ -1.78
SMC4-208ENST00000467468 RAB12Q6IQ22 244 aa3.96□□□□□ -1.78
SMC4-208ENST00000467468 CCNI2Q6ZMN8 369 aaPredicted RBP3.96□□□□□ -1.78
SMC4-208ENST00000467468 NUP54Q7Z3B4 507 aa3.96□□□□□ -1.78
SMC4-208ENST00000467468 DGLUCYQ7Z3D6 616 aa3.96□□□□□ -1.78
SMC4-208ENST00000467468 RBM23Q86U06 439 aaKnown RBP3.96□□□□□ -1.78
SMC4-208ENST00000467468 CLYBLQ8N0X4 340 aa3.96□□□□□ -1.78
SMC4-208ENST00000467468 SLC38A5Q8WUX1 472 aa3.96□□□□□ -1.78
SMC4-208ENST00000467468 TMED6Q8WW62 240 aa3.96□□□□□ -1.78
SMC4-208ENST00000467468 RSPH1Q8WYR4 309 aa3.96□□□□□ -1.78
SMC4-208ENST00000467468 PIGTQ969N2 578 aa3.96□□□□□ -1.78
SMC4-208ENST00000467468 CENPTQ96BT3 561 aa3.96□□□□□ -1.78
SMC4-208ENST00000467468 HNRNPABQ99729 332 aaKnown RBP3.96□□□□□ -1.78
SMC4-208ENST00000467468 GTPBP2Q9BX10 602 aaKnown RBP3.96□□□□□ -1.78
SMC4-208ENST00000467468 MINDY3Q9H8M7 445 aa3.96□□□□□ -1.78
SMC4-208ENST00000467468 CDH20Q9HBT6 801 aa3.96□□□□□ -1.78
SMC4-208ENST00000467468 Q9N2K0 584 aa3.96□□□□□ -1.78
SMC4-208ENST00000467468 ODF2LQ9ULJ1 636 aa3.96□□□□□ -1.78
SMC4-208ENST00000467468 ISY1Q9ULR0 285 aaKnown RBP3.96□□□□□ -1.78
SMC4-208ENST00000467468 PA2G4Q9UQ80 394 aaKnown RBP3.96□□□□□ -1.78
SMC4-208ENST00000467468 AMDHD2Q9Y303 409 aa3.96□□□□□ -1.78
SMC4-208ENST00000467468 YIPF1Q9Y548 306 aa3.96□□□□□ -1.78
SMC4-208ENST00000467468 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.96□□□□□ -1.782e-6■■■□□ 18.8
SMC4-208ENST00000467468 ELOVL7A1L3X0 281 aa3.95□□□□□ -1.78
SMC4-208ENST00000467468 SDR42E2A6NKP2 422 aa3.95□□□□□ -1.78
SMC4-208ENST00000467468 ANKRD66B4E2M5 251 aa3.95□□□□□ -1.78
SMC4-208ENST00000467468 FCGR3BO75015 233 aa3.95□□□□□ -1.78
SMC4-208ENST00000467468 SLC16A8O95907 504 aa3.95□□□□□ -1.78
SMC4-208ENST00000467468 IGHV2-70P01814 119 aa3.95□□□□□ -1.78
SMC4-208ENST00000467468 SPP1P10451 314 aa3.95□□□□□ -1.78
SMC4-208ENST00000467468 UROSP10746 265 aa3.95□□□□□ -1.78
SMC4-208ENST00000467468 EPCAMP16422 314 aa3.95□□□□□ -1.78
SMC4-208ENST00000467468 CD27P26842 260 aa3.95□□□□□ -1.78
SMC4-208ENST00000467468 SSTR2P30874 369 aa3.95□□□□□ -1.78
SMC4-208ENST00000467468 ADARP55265 1226 aaKnown RBP3.95□□□□□ -1.78
SMC4-208ENST00000467468 YBEYP58557 167 aaPredicted RBP3.95□□□□□ -1.78
SMC4-208ENST00000467468 KIAA1024LP59773 190 aa3.95□□□□□ -1.78
SMC4-208ENST00000467468 TUBA1BP68363 451 aa3.95□□□□□ -1.78
SMC4-208ENST00000467468 COG7P83436 770 aa3.95□□□□□ -1.78
SMC4-208ENST00000467468 RPL36AP83881 106 aaKnown RBP3.95□□□□□ -1.78
SMC4-208ENST00000467468 RUNX1T1Q06455 604 aa3.95□□□□□ -1.78
SMC4-208ENST00000467468 WASHC5Q12768 1159 aa3.95□□□□□ -1.78
SMC4-208ENST00000467468 KIF5AQ12840 1032 aa3.95□□□□□ -1.78
SMC4-208ENST00000467468 NPRL3Q12980 569 aa3.95□□□□□ -1.78
SMC4-208ENST00000467468 CBX3Q13185 183 aa3.95□□□□□ -1.78
SMC4-208ENST00000467468 CUL3Q13618 768 aa3.95□□□□□ -1.78
SMC4-208ENST00000467468 DHX34Q14147 1143 aaKnown RBP3.95□□□□□ -1.78
SMC4-208ENST00000467468 SLC39A14Q15043 492 aa3.95□□□□□ -1.78
SMC4-208ENST00000467468 RPS6KA1Q15418 735 aa3.95□□□□□ -1.78
SMC4-208ENST00000467468 TTC31Q49AM3 519 aaPredicted RBP3.95□□□□□ -1.78
SMC4-208ENST00000467468 LBHQ53QV2 105 aaPredicted RBP3.95□□□□□ -1.78
SMC4-208ENST00000467468 LRRC73Q5JTD7 316 aa3.95□□□□□ -1.78
SMC4-208ENST00000467468 FAM122CQ6P4D5 195 aa3.95□□□□□ -1.78
SMC4-208ENST00000467468 CASC4Q6P4E1 433 aa3.95□□□□□ -1.78
SMC4-208ENST00000467468 LINGO4Q6UY18 593 aa3.95□□□□□ -1.78
SMC4-208ENST00000467468 ZNF704Q6ZNC4 412 aaPredicted RBP3.95□□□□□ -1.78
SMC4-208ENST00000467468 KCTD9Q7L273 389 aa3.95□□□□□ -1.78
SMC4-208ENST00000467468 TMPRSS11BQ86T26 416 aa3.95□□□□□ -1.78
SMC4-208ENST00000467468 SIAH3Q8IW03 269 aa3.95□□□□□ -1.78
SMC4-208ENST00000467468 ANKRD13CQ8N6S4 541 aa3.95□□□□□ -1.78
SMC4-208ENST00000467468 OR5M8Q8NGP6 311 aa3.95□□□□□ -1.78
SMC4-208ENST00000467468 PSMA8Q8TAA3 256 aa3.95□□□□□ -1.78
SMC4-208ENST00000467468 SSMEM1Q8WWF3 244 aa3.95□□□□□ -1.78
SMC4-208ENST00000467468 SYN2Q92777 582 aaPredicted RBP3.95□□□□□ -1.78
SMC4-208ENST00000467468 RIT1Q92963 219 aa3.95□□□□□ -1.78
SMC4-208ENST00000467468 SNRNP40Q96DI7 357 aaKnown RBP3.95□□□□□ -1.78
SMC4-208ENST00000467468 BSCL2Q96G97 398 aaPredicted RBP3.95□□□□□ -1.78
SMC4-208ENST00000467468 DUX5Q96PT3 197 aa3.95□□□□□ -1.78
SMC4-208ENST00000467468 VPS33BQ9H267 617 aa3.95□□□□□ -1.78
SMC4-208ENST00000467468 THAP9Q9H5L6 903 aa3.95□□□□□ -1.78
SMC4-208ENST00000467468 MIOSQ9NXC5 875 aa3.95□□□□□ -1.78
SMC4-208ENST00000467468 SCN5AQ14524 2016 aa3.95□□□□□ -1.78
SMC4-208ENST00000467468 PLSCR5A0PG75 271 aa3.94□□□□□ -1.78
SMC4-208ENST00000467468 LILRA5A6NI73 299 aa3.94□□□□□ -1.78
SMC4-208ENST00000467468 DUXAA6NLW8 204 aa3.94□□□□□ -1.78
SMC4-208ENST00000467468 C15orf62A8K5M9 175 aa3.94□□□□□ -1.78
SMC4-208ENST00000467468 LUC7L3O95232 432 aaKnown RBP3.94□□□□□ -1.78
SMC4-208ENST00000467468 PTMAP06454 111 aaKnown RBP3.94□□□□□ -1.78
SMC4-208ENST00000467468 PTGER4P35408 488 aa3.94□□□□□ -1.78
SMC4-208ENST00000467468 RGS7P49802 495 aa3.94□□□□□ -1.78
SMC4-208ENST00000467468 MFAP3P55082 362 aa3.94□□□□□ -1.78
SMC4-208ENST00000467468 TPD52P55327 224 aaPredicted RBP3.94□□□□□ -1.78
SMC4-208ENST00000467468 KRTAP10-9P60411 292 aa3.94□□□□□ -1.78
SMC4-208ENST00000467468 MAT1AQ00266 395 aaKnown RBP3.94□□□□□ -1.78
SMC4-208ENST00000467468 KIF19Q2TAC6 998 aa3.94□□□□□ -1.78
SMC4-208ENST00000467468 MDH1BQ5I0G3 518 aa3.94□□□□□ -1.78
SMC4-208ENST00000467468 C9orf57Q5W0N0 161 aa3.94□□□□□ -1.78
SMC4-208ENST00000467468 CNTN4Q8IWV2 1026 aa3.94□□□□□ -1.78
SMC4-208ENST00000467468 C1orf87Q8N0U7 546 aa3.94□□□□□ -1.78
SMC4-208ENST00000467468 RTL3Q8N8U3 475 aaKnown RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms