RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 PRAMEF33A0A0G2JMD5 474 aa14.75□□□□□ -0.05
NPHP4-205ENST00000466897 SYCE1LA8MT33 242 aa14.75□□□□□ -0.05
NPHP4-205ENST00000466897 ATP8B1O43520 1251 aa14.75□□□□□ -0.05
NPHP4-205ENST00000466897 RBP1P09455 135 aa14.75□□□□□ -0.05
NPHP4-205ENST00000466897 HIST1H2AGP0C0S8 130 aaPredicted RBP14.75□□□□□ -0.05
NPHP4-205ENST00000466897 TPBGLP0DKB5 382 aa14.75□□□□□ -0.05
NPHP4-205ENST00000466897 CDK4P11802 303 aa14.75□□□□□ -0.05
NPHP4-205ENST00000466897 TFEBP19484 476 aa14.75□□□□□ -0.05
NPHP4-205ENST00000466897 HIST1H2ADP20671 130 aa14.75□□□□□ -0.05
NPHP4-205ENST00000466897 PKLRP30613 574 aa14.75□□□□□ -0.05
NPHP4-205ENST00000466897 CRHR1P34998 444 aa14.75□□□□□ -0.05
NPHP4-205ENST00000466897 BDKRB1P46663 353 aa14.75□□□□□ -0.05
NPHP4-205ENST00000466897 PHKG1Q16816 387 aa14.75□□□□□ -0.05
NPHP4-205ENST00000466897 TECRLQ5HYJ1 363 aa14.75□□□□□ -0.05
NPHP4-205ENST00000466897 KLHL35Q6PF15 583 aa14.75□□□□□ -0.05
NPHP4-205ENST00000466897 EFL1Q7Z2Z2 1120 aaKnown RBP14.75□□□□□ -0.05
NPHP4-205ENST00000466897 SPRED1Q7Z699 444 aa14.75□□□□□ -0.05
NPHP4-205ENST00000466897 SRRM1Q8IYB3 904 aaKnown RBP14.75□□□□□ -0.05
NPHP4-205ENST00000466897 WDR48Q8TAF3 677 aa14.75□□□□□ -0.05
NPHP4-205ENST00000466897 IFI44Q8TCB0 444 aa14.75□□□□□ -0.05
NPHP4-205ENST00000466897 HIST1H2AHQ96KK5 128 aa14.75□□□□□ -0.05
NPHP4-205ENST00000466897 CCDC138Q96M89 665 aa14.75□□□□□ -0.05
NPHP4-205ENST00000466897 ATOH8Q96SQ7 321 aa14.75□□□□□ -0.05
NPHP4-205ENST00000466897 HIST1H2AJQ99878 128 aa14.75□□□□□ -0.05
NPHP4-205ENST00000466897 SH3GL2Q99962 352 aa14.75□□□□□ -0.05
NPHP4-205ENST00000466897 H2AFJQ9BTM1 129 aa14.75□□□□□ -0.05
NPHP4-205ENST00000466897 RAB33BQ9H082 229 aa14.75□□□□□ -0.05
NPHP4-205ENST00000466897 ACBD3Q9H3P7 528 aa14.75□□□□□ -0.05
NPHP4-205ENST00000466897 TMBIM4Q9HC24 238 aa14.75□□□□□ -0.05
NPHP4-205ENST00000466897 ZNF446Q9NWS9 450 aa14.75□□□□□ -0.05
NPHP4-205ENST00000466897 PABPN1LA6NDY0 278 aaKnown RBP14.74□□□□□ -0.05
NPHP4-205ENST00000466897 ZNF839A8K0R7 811 aa14.74□□□□□ -0.05
NPHP4-205ENST00000466897 GOLGA8RI6L899 631 aa14.74□□□□□ -0.05
NPHP4-205ENST00000466897 SASH3O75995 380 aa14.74□□□□□ -0.05
NPHP4-205ENST00000466897 CEACAM1P13688 526 aa14.74□□□□□ -0.05
NPHP4-205ENST00000466897 GMPRP36959 345 aa14.74□□□□□ -0.05
NPHP4-205ENST00000466897 CCT5P48643 541 aa14.74□□□□□ -0.05
NPHP4-205ENST00000466897 HNMTP50135 292 aa14.74□□□□□ -0.05
NPHP4-205ENST00000466897 PRKG2Q13237 762 aa14.74□□□□□ -0.05
NPHP4-205ENST00000466897 PLCL1Q15111 1095 aa14.74□□□□□ -0.05
NPHP4-205ENST00000466897 TGFBIQ15582 683 aa14.74□□□□□ -0.05
NPHP4-205ENST00000466897 OR4D1Q15615 310 aa14.74□□□□□ -0.05
NPHP4-205ENST00000466897 CYP2A13Q16696 494 aa14.74□□□□□ -0.05
NPHP4-205ENST00000466897 PERM1Q5SV97 790 aa14.74□□□□□ -0.05
NPHP4-205ENST00000466897 ANKS6Q68DC2 871 aa14.74□□□□□ -0.05
NPHP4-205ENST00000466897 FRA10AC1Q70Z53 315 aa14.74□□□□□ -0.05
NPHP4-205ENST00000466897 AMIGO1Q86WK6 493 aa14.74□□□□□ -0.05
NPHP4-205ENST00000466897 SPATA6LQ8N4H0 392 aa14.74□□□□□ -0.05
NPHP4-205ENST00000466897 BANPQ8N9N5 519 aa14.74□□□□□ -0.05
NPHP4-205ENST00000466897 PDPRQ8NCN5 879 aa14.74□□□□□ -0.05
NPHP4-205ENST00000466897 OR2L8Q8NGY9 312 aa14.74□□□□□ -0.05
NPHP4-205ENST00000466897 OR10G6Q8NH81 332 aa14.74□□□□□ -0.05
NPHP4-205ENST00000466897 LCN9Q8WX39 176 aa14.74□□□□□ -0.05
NPHP4-205ENST00000466897 ATL1Q8WXF7 558 aa14.74□□□□□ -0.05
NPHP4-205ENST00000466897 FBXL8Q96CD0 374 aa14.74□□□□□ -0.05
NPHP4-205ENST00000466897 APOPT1Q96IL0 206 aa14.74□□□□□ -0.05
NPHP4-205ENST00000466897 SMC6Q96SB8 1091 aa14.74□□□□□ -0.05
NPHP4-205ENST00000466897 PKP4Q99569 1192 aa14.74□□□□□ -0.05
NPHP4-205ENST00000466897 MRPL57Q9BQC6 102 aaKnown RBP14.74□□□□□ -0.05
NPHP4-205ENST00000466897 CCDC3Q9BQI4 270 aa14.74□□□□□ -0.05
NPHP4-205ENST00000466897 MRPL46Q9H2W6 279 aaKnown RBP14.74□□□□□ -0.05
NPHP4-205ENST00000466897 ALG9Q9H6U8 611 aa14.74□□□□□ -0.05
NPHP4-205ENST00000466897 KCNK4Q9NYG8 393 aa14.74□□□□□ -0.05
NPHP4-205ENST00000466897 LNPEPQ9UIQ6 1025 aa14.74□□□□□ -0.05
NPHP4-205ENST00000466897 TMCO1Q9UM00 188 aa14.74□□□□□ -0.05
NPHP4-205ENST00000466897 ICKQ9UPZ9 632 aa14.74□□□□□ -0.05
NPHP4-205ENST00000466897 TDRKHQ9Y2W6 561 aaKnown RBP14.74□□□□□ -0.05
NPHP4-205ENST00000466897 UNC13CQ8NB66 2214 aa14.74□□□□□ -0.05
NPHP4-205ENST00000466897 IGHV1OR21-1A0A087WYE8 117 aa14.73□□□□□ -0.05
NPHP4-205ENST00000466897 CPED1A4D0V7 1026 aa14.73□□□□□ -0.05
NPHP4-205ENST00000466897 MATN2O00339 956 aa14.73□□□□□ -0.05
NPHP4-205ENST00000466897 COPEO14579 308 aa14.73□□□□□ -0.05
NPHP4-205ENST00000466897 OPA1O60313 960 aa14.73□□□□□ -0.05
NPHP4-205ENST00000466897 SNRNP200O75643 2136 aaKnown RBP14.73□□□□□ -0.05
NPHP4-205ENST00000466897 UBXN7O94888 489 aa14.73□□□□□ -0.05
NPHP4-205ENST00000466897 DKK1O94907 266 aa14.73□□□□□ -0.05
NPHP4-205ENST00000466897 SLC16A8O95907 504 aa14.73□□□□□ -0.05
NPHP4-205ENST00000466897 MYF5P13349 255 aa14.73□□□□□ -0.05
NPHP4-205ENST00000466897 CAPZBP47756 277 aa14.73□□□□□ -0.05
NPHP4-205ENST00000466897 TRIP6Q15654 476 aaKnown RBP14.73□□□□□ -0.05
NPHP4-205ENST00000466897 CCSMST1Q4G0I0 132 aa14.73□□□□□ -0.05
NPHP4-205ENST00000466897 AGBL2Q5U5Z8 902 aa14.73□□□□□ -0.05
NPHP4-205ENST00000466897 GPSM1Q86YR5 675 aa14.73□□□□□ -0.05
NPHP4-205ENST00000466897 TCAIMQ8N3R3 496 aa14.73□□□□□ -0.05
NPHP4-205ENST00000466897 DENND1AQ8TEH3 1009 aa14.73□□□□□ -0.05
NPHP4-205ENST00000466897 TLCD1Q96CP7 247 aa14.73□□□□□ -0.05
NPHP4-205ENST00000466897 DPYSL5Q9BPU6 564 aa14.73□□□□□ -0.05
NPHP4-205ENST00000466897 RTKNQ9BST9 563 aa14.73□□□□□ -0.05
NPHP4-205ENST00000466897 SRMSQ9H3Y6 488 aa14.73□□□□□ -0.05
NPHP4-205ENST00000466897 TOR4AQ9NXH8 423 aa14.73□□□□□ -0.05
NPHP4-205ENST00000466897 ARL15Q9NXU5 204 aa14.73□□□□□ -0.05
NPHP4-205ENST00000466897 NUDT4Q9NZJ9 180 aa14.73□□□□□ -0.05
NPHP4-205ENST00000466897 EPHA6Q9UF33 1036 aa14.73□□□□□ -0.05
NPHP4-205ENST00000466897 GRID1Q9ULK0 1009 aa14.73□□□□□ -0.05
NPHP4-205ENST00000466897 RNF112Q9ULX5 631 aa14.73□□□□□ -0.05
NPHP4-205ENST00000466897 ENTPD2Q9Y5L3 495 aa14.73□□□□□ -0.05
NPHP4-205ENST00000466897 OR5K3A6NET4 321 aa14.72□□□□□ -0.05
NPHP4-205ENST00000466897 FOXO6A8MYZ6 492 aa14.72□□□□□ -0.05
NPHP4-205ENST00000466897 TARM1B6A8C7 271 aa14.72□□□□□ -0.05
NPHP4-205ENST00000466897 NTN3O00634 580 aaPredicted RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms