RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 PTGESO14684 152 aa3.92□□□□□ -1.78
LRCH3-211ENST00000466054 PCDH7O60245 1069 aa3.92□□□□□ -1.78
LRCH3-211ENST00000466054 TADA2AO75478 443 aa3.92□□□□□ -1.78
LRCH3-211ENST00000466054 PIGNO95427 931 aa3.92□□□□□ -1.78
LRCH3-211ENST00000466054 CCDC175P0C221 793 aa3.92□□□□□ -1.78
LRCH3-211ENST00000466054 CDKN1AP38936 164 aa3.92□□□□□ -1.78
LRCH3-211ENST00000466054 ASCL1P50553 236 aa3.92□□□□□ -1.78
LRCH3-211ENST00000466054 ERVK11-1P61568 191 aa3.92□□□□□ -1.78
LRCH3-211ENST00000466054 HNRNPKP61978 463 aaKnown RBP eCLIP3.92□□□□□ -1.78
LRCH3-211ENST00000466054 LGALS3BPQ08380 585 aa3.92□□□□□ -1.78
LRCH3-211ENST00000466054 TAF13Q15543 124 aa3.92□□□□□ -1.78
LRCH3-211ENST00000466054 VWC2Q2TAL6 325 aa3.92□□□□□ -1.78
LRCH3-211ENST00000466054 ELFN2Q5R3F8 820 aa3.92□□□□□ -1.78
LRCH3-211ENST00000466054 PLA2G4FQ68DD2 849 aa3.92□□□□□ -1.78
LRCH3-211ENST00000466054 RBMS3Q6XE24 437 aaKnown RBP3.92□□□□□ -1.78
LRCH3-211ENST00000466054 DET1Q7L5Y6 550 aa3.92□□□□□ -1.78
LRCH3-211ENST00000466054 TRPT1Q86TN4 253 aaKnown RBP3.92□□□□□ -1.78
LRCH3-211ENST00000466054 CFAP206Q8IYR0 622 aa3.92□□□□□ -1.78
LRCH3-211ENST00000466054 ARHGAP24Q8N264 748 aa3.92□□□□□ -1.78
LRCH3-211ENST00000466054 OR10V1Q8NGI7 309 aa3.92□□□□□ -1.78
LRCH3-211ENST00000466054 OR1J1Q8NGS3 322 aa3.92□□□□□ -1.78
LRCH3-211ENST00000466054 OR13J1Q8NGT2 312 aa3.92□□□□□ -1.78
LRCH3-211ENST00000466054 SSMEM1Q8WWF3 244 aa3.92□□□□□ -1.78
LRCH3-211ENST00000466054 IRGQQ8WZA9 623 aa3.92□□□□□ -1.78
LRCH3-211ENST00000466054 MOB3AQ96BX8 217 aa3.92□□□□□ -1.78
LRCH3-211ENST00000466054 LINC00615Q96LM1 132 aaPredicted RBP3.92□□□□□ -1.78
LRCH3-211ENST00000466054 RHNO1Q9BSD3 238 aa3.92□□□□□ -1.78
LRCH3-211ENST00000466054 TRAF4Q9BUZ4 470 aaPredicted RBP3.92□□□□□ -1.78
LRCH3-211ENST00000466054 SLC25A23Q9BV35 468 aa3.92□□□□□ -1.78
LRCH3-211ENST00000466054 NUP85Q9BW27 656 aa3.92□□□□□ -1.78
LRCH3-211ENST00000466054 BICC1Q9H694 974 aaKnown RBP3.92□□□□□ -1.78
LRCH3-211ENST00000466054 FLRT3Q9NZU0 649 aa3.92□□□□□ -1.78
LRCH3-211ENST00000466054 C5AR2Q9P296 337 aa3.92□□□□□ -1.78
LRCH3-211ENST00000466054 ZNF624Q9P2J8 865 aaPredicted RBP3.92□□□□□ -1.78
LRCH3-211ENST00000466054 MTUS1Q9ULD2 1270 aa3.92□□□□□ -1.78
LRCH3-211ENST00000466054 PADI2Q9Y2J8 665 aa3.92□□□□□ -1.78
LRCH3-211ENST00000466054 A0A0G2JLW4 131 aa3.91□□□□□ -1.78
LRCH3-211ENST00000466054 PMS2P5A8MQ11 134 aa3.91□□□□□ -1.78
LRCH3-211ENST00000466054 H7C0S8 307 aa3.91□□□□□ -1.78
LRCH3-211ENST00000466054 TCERG1O14776 1098 aaKnown RBP3.91□□□□□ -1.78
LRCH3-211ENST00000466054 CLIC2O15247 247 aa3.91□□□□□ -1.78
LRCH3-211ENST00000466054 SPRY1O43609 319 aaPredicted RBP3.91□□□□□ -1.78
LRCH3-211ENST00000466054 PRKRAO75569 313 aaKnown RBP3.91□□□□□ -1.78
LRCH3-211ENST00000466054 IGHV2-70P01814 119 aa3.91□□□□□ -1.78
LRCH3-211ENST00000466054 APOA4P06727 396 aa3.91□□□□□ -1.78
LRCH3-211ENST00000466054 ERCC2P18074 760 aa3.91□□□□□ -1.78
LRCH3-211ENST00000466054 EFNA1P20827 205 aaPredicted RBP3.91□□□□□ -1.78
LRCH3-211ENST00000466054 NOVP48745 357 aa3.91□□□□□ -1.78
LRCH3-211ENST00000466054 CDH11P55287 796 aa3.91□□□□□ -1.78
LRCH3-211ENST00000466054 MAT1AQ00266 395 aaKnown RBP3.91□□□□□ -1.78
LRCH3-211ENST00000466054 RBPJQ06330 500 aa3.91□□□□□ -1.78
LRCH3-211ENST00000466054 COG2Q14746 738 aa3.91□□□□□ -1.78
LRCH3-211ENST00000466054 CCDC6Q16204 474 aa3.91□□□□□ -1.78
LRCH3-211ENST00000466054 ZNF772Q68DY9 489 aaPredicted RBP3.91□□□□□ -1.78
LRCH3-211ENST00000466054 KRT39Q6A163 491 aa3.91□□□□□ -1.78
LRCH3-211ENST00000466054 C11orf63Q6NUN7 778 aa3.91□□□□□ -1.78
LRCH3-211ENST00000466054 MFSD12Q6NUT3 480 aa3.91□□□□□ -1.78
LRCH3-211ENST00000466054 CEACAM20Q6UY09 585 aa3.91□□□□□ -1.78
LRCH3-211ENST00000466054 PI4KAP1Q8N8J0 262 aa3.91□□□□□ -1.78
LRCH3-211ENST00000466054 NPEPL1Q8NDH3 523 aa3.91□□□□□ -1.78
LRCH3-211ENST00000466054 OR6J1Q8NGC5 347 aa3.91□□□□□ -1.78
LRCH3-211ENST00000466054 GRAPLQ8TC17 118 aaPredicted RBP3.91□□□□□ -1.78
LRCH3-211ENST00000466054 GRHL3Q8TE85 626 aa3.91□□□□□ -1.78
LRCH3-211ENST00000466054 FCAMRQ8WWV6 532 aa3.91□□□□□ -1.78
LRCH3-211ENST00000466054 ZNF524Q96C55 264 aa3.91□□□□□ -1.78
LRCH3-211ENST00000466054 NSL1Q96IY1 281 aa3.91□□□□□ -1.78
LRCH3-211ENST00000466054 RADILQ96JH8 1075 aa3.91□□□□□ -1.78
LRCH3-211ENST00000466054 PGLYRP2Q96PD5 576 aa3.91□□□□□ -1.78
LRCH3-211ENST00000466054 PSD2Q9BQI7 771 aa3.91□□□□□ -1.78
LRCH3-211ENST00000466054 AP1M1Q9BXS5 423 aa3.91□□□□□ -1.78
LRCH3-211ENST00000466054 GKN1Q9NS71 199 aa3.91□□□□□ -1.78
LRCH3-211ENST00000466054 TRIM17Q9Y577 477 aa3.91□□□□□ -1.78
LRCH3-211ENST00000466054 PCDH11YQ9BZA8 1340 aa3.91□□□□□ -1.78
LRCH3-211ENST00000466054 WDR81Q562E7 1941 aa3.9□□□□□ -1.78
LRCH3-211ENST00000466054 URADA6NGE7 173 aa3.9□□□□□ -1.79
LRCH3-211ENST00000466054 DUXAA6NLW8 204 aa3.9□□□□□ -1.79
LRCH3-211ENST00000466054 BLOC1S5-TXNDC5H3BN57 136 aa3.9□□□□□ -1.79
LRCH3-211ENST00000466054 CIDEAO60543 219 aa3.9□□□□□ -1.79
LRCH3-211ENST00000466054 CELF2O95319 508 aaKnown RBP3.9□□□□□ -1.79
LRCH3-211ENST00000466054 AZU1P20160 251 aa3.9□□□□□ -1.79
LRCH3-211ENST00000466054 ACHEP22303 614 aa3.9□□□□□ -1.79
LRCH3-211ENST00000466054 CA6P23280 308 aa3.9□□□□□ -1.79
LRCH3-211ENST00000466054 ITGA3P26006 1051 aa3.9□□□□□ -1.79
LRCH3-211ENST00000466054 HOXC8P31273 242 aa3.9□□□□□ -1.79
LRCH3-211ENST00000466054 ALDH3A2P51648 485 aa3.9□□□□□ -1.79
LRCH3-211ENST00000466054 ZNF41P51814 821 aaPredicted RBP3.9□□□□□ -1.79
LRCH3-211ENST00000466054 LINC01547P58512 204 aaPredicted RBP3.9□□□□□ -1.79
LRCH3-211ENST00000466054 TNIP1Q15025 636 aa3.9□□□□□ -1.79
LRCH3-211ENST00000466054 SYT14P1Q58G82 188 aa3.9□□□□□ -1.79
LRCH3-211ENST00000466054 C1orf141Q5JVX7 400 aa3.9□□□□□ -1.79
LRCH3-211ENST00000466054 TMPRSS11BQ86T26 416 aa3.9□□□□□ -1.79
LRCH3-211ENST00000466054 ISCA2Q86U28 154 aa3.9□□□□□ -1.79
LRCH3-211ENST00000466054 MFN1Q8IWA4 741 aa3.9□□□□□ -1.79
LRCH3-211ENST00000466054 ROBO4Q8WZ75 1007 aa3.9□□□□□ -1.79
LRCH3-211ENST00000466054 SYN2Q92777 582 aaPredicted RBP3.9□□□□□ -1.79
LRCH3-211ENST00000466054 SECISBP2LQ93073 1101 aaKnown RBP3.9□□□□□ -1.79
LRCH3-211ENST00000466054 VPS33AQ96AX1 596 aa3.9□□□□□ -1.79
LRCH3-211ENST00000466054 FEVQ99581 238 aa3.9□□□□□ -1.79
LRCH3-211ENST00000466054 EGFL8Q99944 293 aa3.9□□□□□ -1.79
LRCH3-211ENST00000466054 MIS12Q9H081 205 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms