RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 SLC41A2Q96JW4 573 aa19.69■□□□□ 0.74
SKA3-205ENST00000465471 CNTNAP3BQ96NU0 1288 aa19.69■□□□□ 0.74
SKA3-205ENST00000465471 MAP3K3Q99759 626 aa19.69■□□□□ 0.74
SKA3-205ENST00000465471 PITPNM3Q9BZ71 974 aa19.69■□□□□ 0.74
SKA3-205ENST00000465471 CNTNAP3Q9BZ76 1288 aa19.69■□□□□ 0.74
SKA3-205ENST00000465471 B3GNT4Q9C0J1 378 aa19.69■□□□□ 0.74
SKA3-205ENST00000465471 OCIAD1Q9NX40 245 aa19.69■□□□□ 0.74
SKA3-205ENST00000465471 TSR3Q9UJK0 312 aaKnown RBP19.69■□□□□ 0.74
SKA3-205ENST00000465471 MAP1BP46821 2468 aaKnown RBP19.68■□□□□ 0.74
SKA3-205ENST00000465471 IGHV5-51A0A0C4DH38 117 aa19.68■□□□□ 0.74
SKA3-205ENST00000465471 C2orf74A8MZ97 194 aa19.68■□□□□ 0.74
SKA3-205ENST00000465471 MYO1CO00159 1063 aa19.68■□□□□ 0.74
SKA3-205ENST00000465471 TNFSF15O95150 251 aa19.68■□□□□ 0.74
SKA3-205ENST00000465471 WISP3O95389 354 aaPredicted RBP19.68■□□□□ 0.74
SKA3-205ENST00000465471 CHRM5P08912 532 aaPredicted RBP19.68■□□□□ 0.74
SKA3-205ENST00000465471 JMJD7P0C870 316 aa19.68■□□□□ 0.74
SKA3-205ENST00000465471 ERGP11308 486 aa19.68■□□□□ 0.74
SKA3-205ENST00000465471 TNFRSF8P28908 595 aa19.68■□□□□ 0.74
SKA3-205ENST00000465471 PEBP1P30086 187 aaKnown RBP19.68■□□□□ 0.74
SKA3-205ENST00000465471 PGGT1BP53609 377 aa19.68■□□□□ 0.74
SKA3-205ENST00000465471 ERVPABLB-1P60509 514 aa19.68■□□□□ 0.74
SKA3-205ENST00000465471 PRKAA1Q13131 559 aa19.68■□□□□ 0.74
SKA3-205ENST00000465471 EFTUD2Q15029 972 aaKnown RBP eCLIP19.68■□□□□ 0.741e-8■■■■■ 36.9
SKA3-205ENST00000465471 TBC1D25Q3MII6 688 aa19.68■□□□□ 0.74
SKA3-205ENST00000465471 CACHD1Q5VU97 1274 aa19.68■□□□□ 0.74
SKA3-205ENST00000465471 ARMC6Q6NXE6 501 aa19.68■□□□□ 0.74
SKA3-205ENST00000465471 TTC23LQ6PF05 361 aa19.68■□□□□ 0.74
SKA3-205ENST00000465471 KMT5CQ86Y97 462 aa19.68■□□□□ 0.74
SKA3-205ENST00000465471 OR2L8Q8NGY9 312 aa19.68■□□□□ 0.74
SKA3-205ENST00000465471 HMGCLL1Q8TB92 370 aa19.68■□□□□ 0.74
SKA3-205ENST00000465471 MAGEC3Q8TD91 643 aa19.68■□□□□ 0.74
SKA3-205ENST00000465471 DENND1AQ8TEH3 1009 aa19.68■□□□□ 0.74
SKA3-205ENST00000465471 ELMO2Q96JJ3 720 aa19.68■□□□□ 0.74
SKA3-205ENST00000465471 ZNF578Q96N58 590 aaPredicted RBP19.68■□□□□ 0.74
SKA3-205ENST00000465471 GPR22Q99680 433 aa19.68■□□□□ 0.74
SKA3-205ENST00000465471 RAB11FIP5Q9BXF6 653 aa19.68■□□□□ 0.74
SKA3-205ENST00000465471 ACSS3Q9H6R3 686 aa19.68■□□□□ 0.74
SKA3-205ENST00000465471 POPDC3Q9HBV1 291 aa19.68■□□□□ 0.74
SKA3-205ENST00000465471 SPHK1Q9NYA1 384 aa19.68■□□□□ 0.74
SKA3-205ENST00000465471 ACTR10Q9NZ32 417 aa19.68■□□□□ 0.74
SKA3-205ENST00000465471 SPATA7Q9P0W8 599 aa19.68■□□□□ 0.74
SKA3-205ENST00000465471 PISDQ9UG56 409 aa19.68■□□□□ 0.74
SKA3-205ENST00000465471 PCDHGA7Q9Y5G6 932 aa19.68■□□□□ 0.74
SKA3-205ENST00000465471 DMXL2Q8TDJ6 3036 aa19.68■□□□□ 0.74
SKA3-205ENST00000465471 PIPSLA2A3N6 862 aa19.67■□□□□ 0.74
SKA3-205ENST00000465471 KRT87PA6NCN2 255 aa19.67■□□□□ 0.74
SKA3-205ENST00000465471 RASSF9O75901 435 aa19.67■□□□□ 0.74
SKA3-205ENST00000465471 CATP04040 527 aaKnown RBP19.67■□□□□ 0.74
SKA3-205ENST00000465471 ZNF37AP17032 561 aaPredicted RBP19.67■□□□□ 0.74
SKA3-205ENST00000465471 NELFEP18615 380 aaKnown RBP19.67■□□□□ 0.74
SKA3-205ENST00000465471 PRDX3P30048 256 aaKnown RBP19.67■□□□□ 0.74
SKA3-205ENST00000465471 PHBP35232 272 aa19.67■□□□□ 0.74
SKA3-205ENST00000465471 RGS4P49798 205 aa19.67■□□□□ 0.74
SKA3-205ENST00000465471 TAS2R39P59534 338 aa19.67■□□□□ 0.74
SKA3-205ENST00000465471 PDAP1Q13442 181 aaKnown RBP19.67■□□□□ 0.74
SKA3-205ENST00000465471 SLMAPQ14BN4 828 aa19.67■□□□□ 0.74
SKA3-205ENST00000465471 FOXR1Q6PIV2 292 aa19.67■□□□□ 0.74
SKA3-205ENST00000465471 TMEM207Q6UWW9 146 aa19.67■□□□□ 0.74
SKA3-205ENST00000465471 CTAGE3PQ8IX95 158 aa19.67■□□□□ 0.74
SKA3-205ENST00000465471 PPM1NQ8N819 430 aa19.67■□□□□ 0.74
SKA3-205ENST00000465471 ZCCHC14Q8WYQ9 949 aaKnown RBP19.67■□□□□ 0.74
SKA3-205ENST00000465471 LINGO1Q96FE5 620 aa19.67■□□□□ 0.74
SKA3-205ENST00000465471 PPM1MQ96MI6 270 aa19.67■□□□□ 0.74
SKA3-205ENST00000465471 IL17FQ96PD4 163 aa19.67■□□□□ 0.74
SKA3-205ENST00000465471 OR2A14Q96R47 310 aa19.67■□□□□ 0.74
SKA3-205ENST00000465471 TXLNGYQ9BZA5 131 aa19.67■□□□□ 0.74
SKA3-205ENST00000465471 TXNDC16Q9P2K2 825 aa19.67■□□□□ 0.74
SKA3-205ENST00000465471 CIDEBQ9UHD4 219 aa19.67■□□□□ 0.74
SKA3-205ENST00000465471 MTO1Q9Y2Z2 717 aaKnown RBP19.67■□□□□ 0.74
SKA3-205ENST00000465471 SNRNP200O75643 2136 aaKnown RBP19.67■□□□□ 0.74
SKA3-205ENST00000465471 ACACAQ13085 2346 aa19.67■□□□□ 0.74
SKA3-205ENST00000465471 GSAPA4D1B5 854 aa19.66■□□□□ 0.74
SKA3-205ENST00000465471 EFCAB7A8K855 629 aa19.66■□□□□ 0.74
SKA3-205ENST00000465471 MYBL2P10244 700 aa19.66■□□□□ 0.74
SKA3-205ENST00000465471 UGT2B7P16662 529 aa19.66■□□□□ 0.74
SKA3-205ENST00000465471 RBMS1P29558 406 aaKnown RBP19.66■□□□□ 0.74
SKA3-205ENST00000465471 DEKP35659 375 aaKnown RBP19.66■□□□□ 0.74
SKA3-205ENST00000465471 IL2P60568 153 aa19.66■□□□□ 0.74
SKA3-205ENST00000465471 MC2RQ01718 297 aa19.66■□□□□ 0.74
SKA3-205ENST00000465471 POU4F1Q01851 419 aa19.66■□□□□ 0.74
SKA3-205ENST00000465471 SP140Q13342 867 aa19.66■□□□□ 0.74
SKA3-205ENST00000465471 KIR2DS3Q14952 304 aa19.66■□□□□ 0.74
SKA3-205ENST00000465471 CYP2A13Q16696 494 aa19.66■□□□□ 0.74
SKA3-205ENST00000465471 GRTP1Q5TC63 336 aa19.66■□□□□ 0.74
SKA3-205ENST00000465471 SPESP1Q6UW49 350 aa19.66■□□□□ 0.74
SKA3-205ENST00000465471 PROSER1Q86XN7 944 aa19.66■□□□□ 0.74
SKA3-205ENST00000465471 CEP97Q8IW35 865 aa19.66■□□□□ 0.74
SKA3-205ENST00000465471 OR9A1PQ8NGU1 263 aa19.66■□□□□ 0.74
SKA3-205ENST00000465471 SNIP1Q8TAD8 396 aaKnown RBP19.66■□□□□ 0.74
SKA3-205ENST00000465471 DLG3Q92796 817 aa19.66■□□□□ 0.74
SKA3-205ENST00000465471 PDLIM5Q96HC4 596 aaKnown RBP19.66■□□□□ 0.74
SKA3-205ENST00000465471 CYTH2Q99418 400 aa19.66■□□□□ 0.74
SKA3-205ENST00000465471 ANKZF1Q9H8Y5 726 aa19.66■□□□□ 0.74
SKA3-205ENST00000465471 C1GALT1Q9NS00 363 aa19.66■□□□□ 0.74
SKA3-205ENST00000465471 THSD1Q9NS62 852 aa19.66■□□□□ 0.74
SKA3-205ENST00000465471 ACSL6Q9UKU0 697 aa19.66■□□□□ 0.74
SKA3-205ENST00000465471 BTRCQ9Y297 605 aa19.66■□□□□ 0.74
SKA3-205ENST00000465471 PCDHGA3Q9Y5H0 932 aa19.66■□□□□ 0.74
SKA3-205ENST00000465471 CELSR3Q9NYQ7 3312 aa19.65■□□□□ 0.74
SKA3-205ENST00000465471 C9orf172C9J069 976 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms