RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 HIST1H2ADP20671 130 aa19.19■□□□□ 0.66
COL9A3-204ENST00000463487 MPSTP25325 297 aa19.19■□□□□ 0.66
COL9A3-204ENST00000463487 CRABP2P29373 138 aa19.19■□□□□ 0.66
COL9A3-204ENST00000463487 MLLT3P42568 568 aaPredicted RBP19.19■□□□□ 0.66
COL9A3-204ENST00000463487 ARL4DP49703 201 aa19.19■□□□□ 0.66
COL9A3-204ENST00000463487 GFERP55789 205 aa19.19■□□□□ 0.66
COL9A3-204ENST00000463487 RAB10P61026 200 aa19.19■□□□□ 0.66
COL9A3-204ENST00000463487 VSNL1P62760 191 aa19.19■□□□□ 0.66
COL9A3-204ENST00000463487 KIR2DS3Q14952 304 aa19.19■□□□□ 0.66
COL9A3-204ENST00000463487 ARHGAP19Q14CB8 494 aa19.19■□□□□ 0.66
COL9A3-204ENST00000463487 C3orf38Q5JPI3 329 aa19.19■□□□□ 0.66
COL9A3-204ENST00000463487 CACHD1Q5VU97 1274 aa19.19■□□□□ 0.66
COL9A3-204ENST00000463487 ANKS6Q68DC2 871 aa19.19■□□□□ 0.66
COL9A3-204ENST00000463487 FAM92BQ6ZTR7 304 aa19.19■□□□□ 0.66
COL9A3-204ENST00000463487 RAPH1Q70E73 1250 aa19.19■□□□□ 0.66
COL9A3-204ENST00000463487 KMT5CQ86Y97 462 aa19.19■□□□□ 0.66
COL9A3-204ENST00000463487 OR9A1PQ8NGU1 263 aa19.19■□□□□ 0.66
COL9A3-204ENST00000463487 OR2L8Q8NGY9 312 aa19.19■□□□□ 0.66
COL9A3-204ENST00000463487 UBLCP1Q8WVY7 318 aaPredicted RBP19.19■□□□□ 0.66
COL9A3-204ENST00000463487 ANKRD7Q92527 254 aa19.19■□□□□ 0.66
COL9A3-204ENST00000463487 PDLIM5Q96HC4 596 aaKnown RBP19.19■□□□□ 0.66
COL9A3-204ENST00000463487 HIST1H2AHQ96KK5 128 aa19.19■□□□□ 0.66
COL9A3-204ENST00000463487 PAFAH2Q99487 392 aa19.19■□□□□ 0.66
COL9A3-204ENST00000463487 HIST1H2AJQ99878 128 aa19.19■□□□□ 0.66
COL9A3-204ENST00000463487 H2AFJQ9BTM1 129 aa19.19■□□□□ 0.66
COL9A3-204ENST00000463487 TXLNGYQ9BZA5 131 aa19.19■□□□□ 0.66
COL9A3-204ENST00000463487 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.19■□□□□ 0.662e-11■■□□□ 12.4
COL9A3-204ENST00000463487 PLAGL1Q9UM63 463 aa19.19■□□□□ 0.66
COL9A3-204ENST00000463487 LOXL2Q9Y4K0 774 aa19.19■□□□□ 0.66
COL9A3-204ENST00000463487 PCDHGA8Q9Y5G5 932 aa19.19■□□□□ 0.66
COL9A3-204ENST00000463487 AK5Q9Y6K8 562 aa19.19■□□□□ 0.66
COL9A3-204ENST00000463487 V9GYY5 206 aaPredicted RBP19.19■□□□□ 0.66
COL9A3-204ENST00000463487 A8MU76 341 aa19.18■□□□□ 0.66
COL9A3-204ENST00000463487 ARHGEF33A8MVX0 844 aa19.18■□□□□ 0.66
COL9A3-204ENST00000463487 POC1B-GALNT4F8VUJ3 575 aa19.18■□□□□ 0.66
COL9A3-204ENST00000463487 GFYI3L273 518 aa19.18■□□□□ 0.66
COL9A3-204ENST00000463487 MYO1CO00159 1063 aa19.18■□□□□ 0.66
COL9A3-204ENST00000463487 FAM155BO75949 473 aa19.18■□□□□ 0.66
COL9A3-204ENST00000463487 SYF2O95926 243 aaKnown RBP19.18■□□□□ 0.66
COL9A3-204ENST00000463487 CHRM5P08912 532 aaPredicted RBP19.18■□□□□ 0.66
COL9A3-204ENST00000463487 ENO2P09104 434 aaPredicted RBP19.18■□□□□ 0.66
COL9A3-204ENST00000463487 LSSP48449 732 aa19.18■□□□□ 0.66
COL9A3-204ENST00000463487 GABREP78334 506 aa19.18■□□□□ 0.66
COL9A3-204ENST00000463487 ERCC6LQ2NKX8 1250 aa19.18■□□□□ 0.66
COL9A3-204ENST00000463487 EMBQ6PCB8 327 aa19.18■□□□□ 0.66
COL9A3-204ENST00000463487 CYHR1Q6ZMK1 362 aa19.18■□□□□ 0.66
COL9A3-204ENST00000463487 FBXO39Q8N4B4 442 aa19.18■□□□□ 0.66
COL9A3-204ENST00000463487 RCBTB1Q8NDN9 531 aa19.18■□□□□ 0.66
COL9A3-204ENST00000463487 UHMK1Q8TAS1 419 aaKnown RBP19.18■□□□□ 0.66
COL9A3-204ENST00000463487 CAB39LQ9H9S4 337 aa19.18■□□□□ 0.66
COL9A3-204ENST00000463487 PARVBQ9HBI1 364 aa19.18■□□□□ 0.66
COL9A3-204ENST00000463487 ACTR10Q9NZ32 417 aa19.18■□□□□ 0.66
COL9A3-204ENST00000463487 ZNF180Q9UJW8 692 aa19.18■□□□□ 0.66
COL9A3-204ENST00000463487 POMT2Q9UKY4 750 aa19.18■□□□□ 0.66
COL9A3-204ENST00000463487 SATB2Q9UPW6 733 aa19.18■□□□□ 0.66
COL9A3-204ENST00000463487 TRABD2BA6NFA1 517 aa19.17■□□□□ 0.66
COL9A3-204ENST00000463487 ISM1B1AKI9 464 aa19.17■□□□□ 0.66
COL9A3-204ENST00000463487 BTN3A3O00478 584 aa19.17■□□□□ 0.66
COL9A3-204ENST00000463487 CDH3P22223 829 aa19.17■□□□□ 0.66
COL9A3-204ENST00000463487 RBMS1P29558 406 aaKnown RBP19.17■□□□□ 0.66
COL9A3-204ENST00000463487 SERPINB8P50452 374 aa19.17■□□□□ 0.66
COL9A3-204ENST00000463487 CAMK2BQ13554 666 aa19.17■□□□□ 0.66
COL9A3-204ENST00000463487 SLC29A2Q14542 456 aa19.17■□□□□ 0.66
COL9A3-204ENST00000463487 RTP5Q14D33 572 aa19.17■□□□□ 0.66
COL9A3-204ENST00000463487 TAF1BQ53T94 588 aaPredicted RBP19.17■□□□□ 0.66
COL9A3-204ENST00000463487 MROH9Q5TGP6 573 aa19.17■□□□□ 0.66
COL9A3-204ENST00000463487 TMEM164Q5U3C3 297 aa19.17■□□□□ 0.66
COL9A3-204ENST00000463487 FOXR1Q6PIV2 292 aa19.17■□□□□ 0.66
COL9A3-204ENST00000463487 ARHGAP22Q7Z5H3 698 aa19.17■□□□□ 0.66
COL9A3-204ENST00000463487 TBC1D1Q86TI0 1168 aaPredicted RBP19.17■□□□□ 0.66
COL9A3-204ENST00000463487 FAM129CQ86XR2 697 aa19.17■□□□□ 0.66
COL9A3-204ENST00000463487 MARCH9Q86YJ5 346 aa19.17■□□□□ 0.66
COL9A3-204ENST00000463487 CEP97Q8IW35 865 aa19.17■□□□□ 0.66
COL9A3-204ENST00000463487 ADGRF3Q8IZF5 1079 aa19.17■□□□□ 0.66
COL9A3-204ENST00000463487 SLC12A9Q9BXP2 914 aa19.17■□□□□ 0.66
COL9A3-204ENST00000463487 ZNF768Q9H5H4 540 aaKnown RBP19.17■□□□□ 0.66
COL9A3-204ENST00000463487 PPCSQ9HAB8 311 aa19.17■□□□□ 0.66
COL9A3-204ENST00000463487 C1GALT1Q9NS00 363 aa19.17■□□□□ 0.66
COL9A3-204ENST00000463487 FETUBQ9UGM5 382 aa19.17■□□□□ 0.66
COL9A3-204ENST00000463487 TLK1Q9UKI8 766 aa19.17■□□□□ 0.66
COL9A3-204ENST00000463487 COL27A1Q8IZC6 1860 aaPredicted RBP19.17■□□□□ 0.66
COL9A3-204ENST00000463487 KRT37O76014 449 aa19.16■□□□□ 0.66
COL9A3-204ENST00000463487 FKBP9O95302 570 aa19.16■□□□□ 0.66
COL9A3-204ENST00000463487 ZBTB11O95625 1053 aaPredicted RBP19.16■□□□□ 0.66
COL9A3-204ENST00000463487 TSPAN12O95859 305 aa19.16■□□□□ 0.66
COL9A3-204ENST00000463487 MPOP05164 745 aa19.16■□□□□ 0.66
COL9A3-204ENST00000463487 PRDX3P30048 256 aaKnown RBP19.16■□□□□ 0.66
COL9A3-204ENST00000463487 KPNA2P52292 529 aaKnown RBP19.16■□□□□ 0.66
COL9A3-204ENST00000463487 AP1S2P56377 157 aa19.16■□□□□ 0.66
COL9A3-204ENST00000463487 GRB7Q14451 532 aa19.16■□□□□ 0.66
COL9A3-204ENST00000463487 ZNF460Q14592 562 aa19.16■□□□□ 0.66
COL9A3-204ENST00000463487 NAA25Q14CX7 972 aa19.16■□□□□ 0.66
COL9A3-204ENST00000463487 C16orf72Q14CZ0 275 aa19.16■□□□□ 0.66
COL9A3-204ENST00000463487 ZKSCAN8Q15776 578 aaPredicted RBP19.16■□□□□ 0.66
COL9A3-204ENST00000463487 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.16■□□□□ 0.66
COL9A3-204ENST00000463487 TMTC4Q5T4D3 741 aa19.16■□□□□ 0.66
COL9A3-204ENST00000463487 FBXO38Q6PIJ6 1188 aa19.16■□□□□ 0.66
COL9A3-204ENST00000463487 SPESP1Q6UW49 350 aa19.16■□□□□ 0.66
COL9A3-204ENST00000463487 ADAMTSL2Q86TH1 951 aa19.16■□□□□ 0.66
COL9A3-204ENST00000463487 HMGCLL1Q8TB92 370 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms