RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 RBMXL3Q8N7X1 1067 aaKnown RBP7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 ENDOVQ8N8Q3 282 aaKnown RBP7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 SEC14L1Q92503 715 aa7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 CPT1BQ92523 772 aa7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 PEX13Q92968 403 aa7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 HDAC10Q969S8 669 aa7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 ULK4Q96C45 1275 aa7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 RMDN2Q96LZ7 410 aa7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 LRFN5Q96NI6 719 aa7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 INSM2Q96T92 566 aaPredicted RBP7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 NAP1L3Q99457 506 aaPredicted RBP7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 CD180Q99467 661 aa7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 NAPGQ99747 312 aaPredicted RBP7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 NUDT9Q9BW91 350 aa7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 DDX47Q9H0S4 455 aaKnown RBP7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 CHST8Q9H2A9 424 aa7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 MRM3Q9HC36 420 aaKnown RBP7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 LATS2Q9NRM7 1088 aa7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 TREX1Q9NSU2 369 aa7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 SYBUQ9NX95 663 aa7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 LUZP4Q9P127 313 aa7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 TSR3Q9UJK0 312 aaKnown RBP7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 PRSS21Q9Y6M0 314 aa7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 PCNX1Q96RV3 2341 aa7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 C2CD3Q4AC94 2353 aa7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 A1L4Q6 167 aa7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 KCNJ13O60928 360 aa7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 ZBTB11O95625 1053 aaPredicted RBP7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 CLDN1O95832 211 aa7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 RAB40ALP0C0E4 278 aa7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 ATP1B2P14415 290 aaPredicted RBP7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 MGAT1P26572 445 aa7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 NMBRP28336 390 aa7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 MAGEA3P43357 314 aa7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 ARCN1P48444 511 aaKnown RBP7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 CCL11P51671 97 aa7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 ITGA1P56199 1179 aa7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 RPS15P62841 145 aaKnown RBP7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 CDK16Q00536 496 aa7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 ITIH4Q14624 930 aa7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 PLCL1Q15111 1095 aa7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 INPP5JQ15735 1006 aaPredicted RBP7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 PLEKHS1Q5SXH7 462 aa7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 METRNLQ641Q3 311 aa7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 SLC6A19Q695T7 634 aa7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 PACS1Q6VY07 963 aa7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 OOSP2Q86WS3 158 aa7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 TMEM126BQ8IUX1 230 aa7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 CARFQ8N187 725 aa7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 NAT8LQ8N9F0 302 aa7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 FDCSPQ8NFU4 85 aa7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 OR2L2Q8NH16 312 aa7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 HM13Q8TCT9 377 aa7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 LKAAEAR1Q8TD35 194 aa7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 SLCO2A1Q92959 643 aa7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 MR1Q95460 341 aa7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 TCTN2Q96GX1 697 aa7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 SGSM3Q96HU1 749 aa7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 CAPZA3Q96KX2 299 aa7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 COPS8Q99627 209 aa7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 NRTNQ99748 197 aa7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 TRIM56Q9BRZ2 755 aaKnown RBP7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 KIFC1Q9BW19 673 aa7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 WWP1Q9H0M0 922 aa7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 KIR3DX1Q9H7L2 352 aa7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 ACSS2Q9NR19 701 aa7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 CHRAC1Q9NRG0 131 aa7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 IMP3Q9NV31 184 aaKnown RBP7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 PCMTD2Q9NV79 361 aa7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 CUEDC1Q9NWM3 386 aaPredicted RBP7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 HRASLS2Q9NWW9 162 aa7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 MARCH4Q9P2E8 410 aaPredicted RBP7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 SLC24A2Q9UI40 661 aa7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 POMT2Q9UKY4 750 aa7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 FARSAQ9Y285 508 aaKnown RBP7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 DNMT3AQ9Y6K1 912 aaPredicted RBP7.68□□□□□ -1.18
CDC42BPA-210ENST00000462553 ZFHX3Q15911 3703 aa7.67□□□□□ -1.18
CDC42BPA-210ENST00000462553 PKDREJQ9NTG1 2253 aa7.67□□□□□ -1.18
CDC42BPA-210ENST00000462553 F8P00451 2351 aa7.67□□□□□ -1.18
CDC42BPA-210ENST00000462553 CPAMD8Q8IZJ3 1885 aa7.67□□□□□ -1.18
CDC42BPA-210ENST00000462553 GOLGA6L10A0A0M3HER8 536 aa7.67□□□□□ -1.18
CDC42BPA-210ENST00000462553 UBA6A0AVT1 1052 aaPredicted RBP7.67□□□□□ -1.18
CDC42BPA-210ENST00000462553 OR6C74A6NCV1 312 aa7.67□□□□□ -1.18
CDC42BPA-210ENST00000462553 MGAT4DA6NG13 374 aa7.67□□□□□ -1.18
CDC42BPA-210ENST00000462553 WIPF3A6NGB9 483 aa7.67□□□□□ -1.18
CDC42BPA-210ENST00000462553 MEN1O00255 615 aa7.67□□□□□ -1.18
CDC42BPA-210ENST00000462553 OR1I1O60431 355 aa7.67□□□□□ -1.18
CDC42BPA-210ENST00000462553 AVILO75366 819 aa7.67□□□□□ -1.18
CDC42BPA-210ENST00000462553 LDLRP01130 860 aa7.67□□□□□ -1.18
CDC42BPA-210ENST00000462553 IVDP26440 423 aa7.67□□□□□ -1.18
CDC42BPA-210ENST00000462553 NPY2RP49146 381 aa7.67□□□□□ -1.18
CDC42BPA-210ENST00000462553 ATP1A4Q13733 1029 aa7.67□□□□□ -1.18
CDC42BPA-210ENST00000462553 PTK6Q13882 451 aa7.67□□□□□ -1.18
CDC42BPA-210ENST00000462553 PCID2Q5JVF3 399 aa7.67□□□□□ -1.18
CDC42BPA-210ENST00000462553 RNASEH2BQ5TBB1 312 aaKnown RBP7.67□□□□□ -1.18
CDC42BPA-210ENST00000462553 ZNF385CQ66K41 422 aaPredicted RBP7.67□□□□□ -1.18
CDC42BPA-210ENST00000462553 ZNF787Q6DD87 383 aa7.67□□□□□ -1.18
CDC42BPA-210ENST00000462553 KLHL35Q6PF15 583 aa7.67□□□□□ -1.18
CDC42BPA-210ENST00000462553 CES3Q6UWW8 571 aa7.67□□□□□ -1.18
CDC42BPA-210ENST00000462553 NLRP9Q7RTR0 991 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms