RNA–Protein interactions for RNA: ENST00000462489.1

CNOT11-203, Transcript of CCR4-NOT transcription complex subunit 11, humanhuman

TSL 2

Gene CNOT11, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11-203ENST00000462489 FAM114A1Q8IWE2 563 aa2.43□□□□□ -2.02
CNOT11-203ENST00000462489 ZNF485Q8NCK3 441 aa2.43□□□□□ -2.02
CNOT11-203ENST00000462489 NPEPL1Q8NDH3 523 aa2.43□□□□□ -2.02
CNOT11-203ENST00000462489 OR2T11Q8NH01 316 aa2.43□□□□□ -2.02
CNOT11-203ENST00000462489 PHLDA1Q8WV24 401 aaPredicted RBP2.43□□□□□ -2.02
CNOT11-203ENST00000462489 SLAMF9Q96A28 289 aa2.43□□□□□ -2.02
CNOT11-203ENST00000462489 POM121L2Q96KW2 1035 aa2.43□□□□□ -2.02
CNOT11-203ENST00000462489 ZNF599Q96NL3 588 aa2.43□□□□□ -2.02
CNOT11-203ENST00000462489 OLFM1Q99784 485 aa2.43□□□□□ -2.02
CNOT11-203ENST00000462489 EGLN1Q9GZT9 426 aa2.43□□□□□ -2.02
CNOT11-203ENST00000462489 CPVLQ9H3G5 476 aa2.43□□□□□ -2.02
CNOT11-203ENST00000462489 PDE7BQ9NP56 450 aa2.43□□□□□ -2.02
CNOT11-203ENST00000462489 DPP3Q9NY33 737 aa2.43□□□□□ -2.02
CNOT11-203ENST00000462489 MORF4L1Q9UBU8 362 aa2.43□□□□□ -2.02
CNOT11-203ENST00000462489 GRID1Q9ULK0 1009 aa2.43□□□□□ -2.02
CNOT11-203ENST00000462489 MRPS28Q9Y2Q9 187 aaKnown RBP2.43□□□□□ -2.02
CNOT11-203ENST00000462489 TCRBV21S2A2A0A5A6 115 aa2.42□□□□□ -2.02
CNOT11-203ENST00000462489 ZNF197O14709 1029 aa2.42□□□□□ -2.02
CNOT11-203ENST00000462489 IPO8O15397 1037 aaKnown RBP2.42□□□□□ -2.02
CNOT11-203ENST00000462489 BCL10O95999 233 aa2.42□□□□□ -2.02
CNOT11-203ENST00000462489 GPIP06744 558 aa2.42□□□□□ -2.02
CNOT11-203ENST00000462489 LINGO3P0C6S8 592 aa2.42□□□□□ -2.02
CNOT11-203ENST00000462489 LMAN1P49257 510 aa2.42□□□□□ -2.02
CNOT11-203ENST00000462489 ALDH3A2P51648 485 aa2.42□□□□□ -2.02
CNOT11-203ENST00000462489 MAT1AQ00266 395 aaKnown RBP2.42□□□□□ -2.02
CNOT11-203ENST00000462489 DMPKQ09013 629 aa2.42□□□□□ -2.02
CNOT11-203ENST00000462489 ITPRIPL2Q3MIP1 535 aa2.42□□□□□ -2.02
CNOT11-203ENST00000462489 ELFN2Q5R3F8 820 aa2.42□□□□□ -2.02
CNOT11-203ENST00000462489 ARHGEF16Q5VV41 709 aa2.42□□□□□ -2.02
CNOT11-203ENST00000462489 GARNL3Q5VVW2 1013 aa2.42□□□□□ -2.02
CNOT11-203ENST00000462489 TMEM211Q6ICI0 200 aa2.42□□□□□ -2.02
CNOT11-203ENST00000462489 CFAP161Q6P656 301 aa2.42□□□□□ -2.02
CNOT11-203ENST00000462489 TRIM65Q6PJ69 517 aa2.42□□□□□ -2.02
CNOT11-203ENST00000462489 MYPOPQ86VE0 399 aaPredicted RBP2.42□□□□□ -2.02
CNOT11-203ENST00000462489 TMEM139Q8IV31 216 aa2.42□□□□□ -2.02
CNOT11-203ENST00000462489 MAML2Q8IZL2 1156 aaPredicted RBP2.42□□□□□ -2.02
CNOT11-203ENST00000462489 ARHGAP24Q8N264 748 aa2.42□□□□□ -2.02
CNOT11-203ENST00000462489 ZNF843Q8N446 348 aa2.42□□□□□ -2.02
CNOT11-203ENST00000462489 ZNF614Q8N883 585 aa2.42□□□□□ -2.02
CNOT11-203ENST00000462489 APPL2Q8NEU8 664 aa2.42□□□□□ -2.02
CNOT11-203ENST00000462489 OR5AP2Q8NGF4 316 aa2.42□□□□□ -2.02
CNOT11-203ENST00000462489 OR52N5Q8NH56 324 aa2.42□□□□□ -2.02
CNOT11-203ENST00000462489 SSMEM1Q8WWF3 244 aa2.42□□□□□ -2.02
CNOT11-203ENST00000462489 SUSD6Q92537 303 aa2.42□□□□□ -2.02
CNOT11-203ENST00000462489 ZNF653Q96CK0 615 aa2.42□□□□□ -2.02
CNOT11-203ENST00000462489 PRAC1Q96KF2 57 aa2.42□□□□□ -2.02
CNOT11-203ENST00000462489 RAD9AQ99638 391 aa2.42□□□□□ -2.02
CNOT11-203ENST00000462489 MCRIP2Q9BUT9 160 aaKnown RBP2.42□□□□□ -2.02
CNOT11-203ENST00000462489 MIS12Q9H081 205 aa2.42□□□□□ -2.02
CNOT11-203ENST00000462489 SLC35C2Q9NQQ7 365 aa2.42□□□□□ -2.02
CNOT11-203ENST00000462489 RNF186Q9NXI6 227 aa2.42□□□□□ -2.02
CNOT11-203ENST00000462489 CACNG5Q9UF02 275 aa2.42□□□□□ -2.02
CNOT11-203ENST00000462489 DDX25Q9UHL0 483 aaKnown RBP2.42□□□□□ -2.02
CNOT11-203ENST00000462489 ZHX1Q9UKY1 873 aaPredicted RBP2.42□□□□□ -2.02
CNOT11-203ENST00000462489 PCDHGB4Q9UN71 923 aa2.42□□□□□ -2.02
CNOT11-203ENST00000462489 PPIEQ9UNP9 301 aaKnown RBP2.42□□□□□ -2.02
CNOT11-203ENST00000462489 PCDH11YQ9BZA8 1340 aa2.42□□□□□ -2.02
CNOT11-203ENST00000462489 COL2A1P02458 1487 aaPredicted RBP2.41□□□□□ -2.02
CNOT11-203ENST00000462489 A0A1W2PPQ1 181 aa2.41□□□□□ -2.02
CNOT11-203ENST00000462489 NDUFAF8A1L188 74 aa2.41□□□□□ -2.02
CNOT11-203ENST00000462489 ANKRD61A6NGH8 418 aa2.41□□□□□ -2.02
CNOT11-203ENST00000462489 HMGB1P1B2RPK0 211 aaPredicted RBP2.41□□□□□ -2.02
CNOT11-203ENST00000462489 DCXO43602 365 aa2.41□□□□□ -2.02
CNOT11-203ENST00000462489 CDC123O75794 336 aaPredicted RBP2.41□□□□□ -2.02
CNOT11-203ENST00000462489 IGHV2-70P01814 119 aa2.41□□□□□ -2.02
CNOT11-203ENST00000462489 VTNP04004 478 aa2.41□□□□□ -2.02
CNOT11-203ENST00000462489 HSPA8P11142 646 aaKnown RBP2.41□□□□□ -2.02
CNOT11-203ENST00000462489 PFKFB1P16118 471 aa2.41□□□□□ -2.02
CNOT11-203ENST00000462489 ACTN2P35609 894 aa2.41□□□□□ -2.02
CNOT11-203ENST00000462489 NNMTP40261 264 aa2.41□□□□□ -2.02
CNOT11-203ENST00000462489 MTHFRP42898 656 aa2.41□□□□□ -2.02
CNOT11-203ENST00000462489 MATR3P43243 847 aaKnown RBP eCLIP2.41□□□□□ -2.02
CNOT11-203ENST00000462489 CLK1P49759 484 aaKnown RBP2.41□□□□□ -2.02
CNOT11-203ENST00000462489 ZNF75DP51815 510 aa2.41□□□□□ -2.02
CNOT11-203ENST00000462489 CDH13P55290 713 aa2.41□□□□□ -2.02
CNOT11-203ENST00000462489 TPD52P55327 224 aaPredicted RBP2.41□□□□□ -2.02
CNOT11-203ENST00000462489 KRTAP10-12P60413 245 aa2.41□□□□□ -2.02
CNOT11-203ENST00000462489 SNRPD1P62314 119 aaKnown RBP2.41□□□□□ -2.02
CNOT11-203ENST00000462489 UBXN2AP68543 259 aa2.41□□□□□ -2.02
CNOT11-203ENST00000462489 HSPB3Q12988 150 aa2.41□□□□□ -2.02
CNOT11-203ENST00000462489 RRS1Q15050 365 aaKnown RBP2.41□□□□□ -2.02
CNOT11-203ENST00000462489 SNAPC1Q16533 368 aa2.41□□□□□ -2.02
CNOT11-203ENST00000462489 SYT14P1Q58G82 188 aa2.41□□□□□ -2.02
CNOT11-203ENST00000462489 XKR6Q5GH73 641 aa2.41□□□□□ -2.02
CNOT11-203ENST00000462489 SPDYCQ5MJ68 293 aa2.41□□□□□ -2.02
CNOT11-203ENST00000462489 PWWP2BQ6NUJ5 590 aa2.41□□□□□ -2.02
CNOT11-203ENST00000462489 ZNF613Q6PF04 617 aa2.41□□□□□ -2.02
CNOT11-203ENST00000462489 BHLHB9Q6PI77 547 aa2.41□□□□□ -2.02
CNOT11-203ENST00000462489 PRPF39Q86UA1 669 aaKnown RBP2.41□□□□□ -2.02
CNOT11-203ENST00000462489 ZNF595Q8IYB9 648 aa2.41□□□□□ -2.02
CNOT11-203ENST00000462489 KIRREL3Q8IZU9 778 aa2.41□□□□□ -2.02
CNOT11-203ENST00000462489 OR4C3Q8NH37 302 aa2.41□□□□□ -2.02
CNOT11-203ENST00000462489 CFAP61Q8NHU2 1237 aa2.41□□□□□ -2.02
CNOT11-203ENST00000462489 MOCOSQ96EN8 888 aa2.41□□□□□ -2.02
CNOT11-203ENST00000462489 SFXN2Q96NB2 322 aa2.41□□□□□ -2.02
CNOT11-203ENST00000462489 GCNAQ96QF7 691 aa2.41□□□□□ -2.02
CNOT11-203ENST00000462489 KRT12Q99456 494 aa2.41□□□□□ -2.02
CNOT11-203ENST00000462489 SEPHS2Q99611 448 aa2.41□□□□□ -2.02
CNOT11-203ENST00000462489 FUCA2Q9BTY2 467 aa2.41□□□□□ -2.02
CNOT11-203ENST00000462489 MXD3Q9BW11 206 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms