RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 SEC16AO15027 2179 aa8.85□□□□□ -0.99
BRCA1-207ENST00000461798 BOD1L1Q8NFC6 3051 aa8.84□□□□□ -0.99
BRCA1-207ENST00000461798 A0A0J9YY10 115 aa8.84□□□□□ -0.99
BRCA1-207ENST00000461798 LOC100996750A0A140TA64 210 aa8.84□□□□□ -0.99
BRCA1-207ENST00000461798 E7EQ34 232 aa8.84□□□□□ -0.99
BRCA1-207ENST00000461798 K7EM74 188 aa8.84□□□□□ -0.99
BRCA1-207ENST00000461798 CD3EAPO15446 510 aaKnown RBP8.84□□□□□ -0.99
BRCA1-207ENST00000461798 ZNF749O43361 778 aa8.84□□□□□ -0.99
BRCA1-207ENST00000461798 CEACAM4O75871 244 aa8.84□□□□□ -0.99
BRCA1-207ENST00000461798 FGGP02679 453 aa8.84□□□□□ -0.99
BRCA1-207ENST00000461798 APOA4P06727 396 aa8.84□□□□□ -0.99
BRCA1-207ENST00000461798 TPSB2P20231 275 aa8.84□□□□□ -0.99
BRCA1-207ENST00000461798 CYP2A7P20853 494 aa8.84□□□□□ -0.99
BRCA1-207ENST00000461798 RPS3P23396 243 aaKnown RBP eCLIP8.84□□□□□ -0.99
BRCA1-207ENST00000461798 AOAHP28039 575 aa8.84□□□□□ -0.99
BRCA1-207ENST00000461798 MAGEA6P43360 314 aa8.84□□□□□ -0.99
BRCA1-207ENST00000461798 TTPAP49638 278 aa8.84□□□□□ -0.99
BRCA1-207ENST00000461798 RAB28P51157 221 aa8.84□□□□□ -0.99
BRCA1-207ENST00000461798 RPS18P62269 152 aaKnown RBP8.84□□□□□ -0.99
BRCA1-207ENST00000461798 IL10RAQ13651 578 aa8.84□□□□□ -0.99
BRCA1-207ENST00000461798 GRB7Q14451 532 aa8.84□□□□□ -0.99
BRCA1-207ENST00000461798 BRD3Q15059 726 aa8.84□□□□□ -0.99
BRCA1-207ENST00000461798 TPSAB1Q15661 275 aa8.84□□□□□ -0.99
BRCA1-207ENST00000461798 ZIC1Q15915 447 aa8.84□□□□□ -0.99
BRCA1-207ENST00000461798 SYTL3Q4VX76 610 aa8.84□□□□□ -0.99
BRCA1-207ENST00000461798 LRRC8BQ6P9F7 803 aa8.84□□□□□ -0.99
BRCA1-207ENST00000461798 FAM198BQ6UWH4 519 aa8.84□□□□□ -0.99
BRCA1-207ENST00000461798 UNC5DQ6UXZ4 953 aa8.84□□□□□ -0.99
BRCA1-207ENST00000461798 NAPRTQ6XQN6 538 aa8.84□□□□□ -0.99
BRCA1-207ENST00000461798 LRRC6Q86X45 466 aa8.84□□□□□ -0.99
BRCA1-207ENST00000461798 VRK3Q8IV63 474 aa8.84□□□□□ -0.99
BRCA1-207ENST00000461798 SYTL1Q8IYJ3 562 aa8.84□□□□□ -0.99
BRCA1-207ENST00000461798 DNAJC22Q8N4W6 341 aa8.84□□□□□ -0.99
BRCA1-207ENST00000461798 C19orf47Q8N9M1 422 aaKnown RBP8.84□□□□□ -0.99
BRCA1-207ENST00000461798 CLIP3Q96DZ5 547 aa8.84□□□□□ -0.99
BRCA1-207ENST00000461798 DHRS4Q9BTZ2 278 aa8.84□□□□□ -0.99
BRCA1-207ENST00000461798 MENTQ9BUN1 341 aa8.84□□□□□ -0.99
BRCA1-207ENST00000461798 KRTAP4-6Q9BYQ5 205 aa8.84□□□□□ -0.99
BRCA1-207ENST00000461798 TRIM55Q9BYV6 548 aa8.84□□□□□ -0.99
BRCA1-207ENST00000461798 TRIM4Q9C037 500 aa8.84□□□□□ -0.99
BRCA1-207ENST00000461798 LZTFL1Q9NQ48 299 aa8.84□□□□□ -0.99
BRCA1-207ENST00000461798 CATSPERZQ9NTU4 200 aa8.84□□□□□ -0.99
BRCA1-207ENST00000461798 MARCH4Q9P2E8 410 aaPredicted RBP8.84□□□□□ -0.99
BRCA1-207ENST00000461798 ANAPC5Q9UJX4 755 aa8.84□□□□□ -0.99
BRCA1-207ENST00000461798 TCFL5Q9UL49 500 aa8.84□□□□□ -0.99
BRCA1-207ENST00000461798 TP53TG5Q9Y2B4 290 aa8.84□□□□□ -0.99
BRCA1-207ENST00000461798 PCDHGB7Q9Y5F8 929 aa8.84□□□□□ -0.99
BRCA1-207ENST00000461798 BSNQ9UPA5 3926 aa8.84□□□□□ -0.99
BRCA1-207ENST00000461798 UBR5O95071 2799 aaPredicted RBP8.83□□□□□ -1
BRCA1-207ENST00000461798 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.83□□□□□ -1
BRCA1-207ENST00000461798 KPNA5O15131 536 aa8.83□□□□□ -1
BRCA1-207ENST00000461798 HCRTR1O43613 425 aa8.83□□□□□ -1
BRCA1-207ENST00000461798 PRICKLE3O43900 615 aaPredicted RBP8.83□□□□□ -1
BRCA1-207ENST00000461798 OR2B3O76000 313 aa8.83□□□□□ -1
BRCA1-207ENST00000461798 FKBP9O95302 570 aa8.83□□□□□ -1
BRCA1-207ENST00000461798 ONECUT2O95948 504 aa8.83□□□□□ -1
BRCA1-207ENST00000461798 RPN2P04844 631 aa8.83□□□□□ -1
BRCA1-207ENST00000461798 CD63P08962 238 aa8.83□□□□□ -1
BRCA1-207ENST00000461798 AGXTP21549 392 aa8.83□□□□□ -1
BRCA1-207ENST00000461798 CD9P21926 228 aa8.83□□□□□ -1
BRCA1-207ENST00000461798 ARNTP27540 789 aa8.83□□□□□ -1
BRCA1-207ENST00000461798 NMBRP28336 390 aa8.83□□□□□ -1
BRCA1-207ENST00000461798 PEBP1P30086 187 aaKnown RBP8.83□□□□□ -1
BRCA1-207ENST00000461798 PKLRP30613 574 aa8.83□□□□□ -1
BRCA1-207ENST00000461798 GCGRP47871 477 aa8.83□□□□□ -1
BRCA1-207ENST00000461798 KCNJ1P48048 391 aa8.83□□□□□ -1
BRCA1-207ENST00000461798 ADARP55265 1226 aaKnown RBP8.83□□□□□ -1
BRCA1-207ENST00000461798 SESN2P58004 480 aaPredicted RBP8.83□□□□□ -1
BRCA1-207ENST00000461798 CCZ1BP86790 482 aa8.83□□□□□ -1
BRCA1-207ENST00000461798 CCZ1P86791 482 aaPredicted RBP8.83□□□□□ -1
BRCA1-207ENST00000461798 HSPA14Q0VDF9 509 aa8.83□□□□□ -1
BRCA1-207ENST00000461798 NCF4Q15080 339 aa8.83□□□□□ -1
BRCA1-207ENST00000461798 RHBDD2Q6NTF9 364 aa8.83□□□□□ -1
BRCA1-207ENST00000461798 TLDC1Q6P9B6 456 aa8.83□□□□□ -1
BRCA1-207ENST00000461798 ASB18Q6ZVZ8 466 aa8.83□□□□□ -1
BRCA1-207ENST00000461798 LDB1Q86U70 411 aaPredicted RBP8.83□□□□□ -1
BRCA1-207ENST00000461798 TRIM73Q86UV7 250 aa8.83□□□□□ -1
BRCA1-207ENST00000461798 HOOK3Q86VS8 718 aa8.83□□□□□ -1
BRCA1-207ENST00000461798 DCUN1D3Q8IWE4 304 aa8.83□□□□□ -1
BRCA1-207ENST00000461798 GPR135Q8IZ08 494 aa8.83□□□□□ -1
BRCA1-207ENST00000461798 ENDOVQ8N8Q3 282 aaKnown RBP8.83□□□□□ -1
BRCA1-207ENST00000461798 PRELID2Q8N945 189 aa8.83□□□□□ -1
BRCA1-207ENST00000461798 LINC01555Q8NAE3 123 aa8.83□□□□□ -1
BRCA1-207ENST00000461798 LKAAEAR1Q8TD35 194 aa8.83□□□□□ -1
BRCA1-207ENST00000461798 SLC22A18Q96BI1 424 aa8.83□□□□□ -1
BRCA1-207ENST00000461798 PANX3Q96QZ0 392 aa8.83□□□□□ -1
BRCA1-207ENST00000461798 TCF12Q99081 682 aa8.83□□□□□ -1
BRCA1-207ENST00000461798 C17orf62Q9BQA9 187 aa8.83□□□□□ -1
BRCA1-207ENST00000461798 SPRTNQ9H040 489 aaPredicted RBP8.83□□□□□ -1
BRCA1-207ENST00000461798 KLHL25Q9H0H3 589 aa8.83□□□□□ -1
BRCA1-207ENST00000461798 SNX7Q9UNH6 387 aa8.83□□□□□ -1
BRCA1-207ENST00000461798 PLCL2Q9UPR0 1127 aa8.83□□□□□ -1
BRCA1-207ENST00000461798 TDRKHQ9Y2W6 561 aaKnown RBP8.83□□□□□ -1
BRCA1-207ENST00000461798 NBASA2RRP1 2371 aa8.82□□□□□ -1
BRCA1-207ENST00000461798 CLEC18AA5D8T8 446 aa8.82□□□□□ -1
BRCA1-207ENST00000461798 IQCF5A8MTL0 148 aa8.82□□□□□ -1
BRCA1-207ENST00000461798 ISM1B1AKI9 464 aa8.82□□□□□ -1
BRCA1-207ENST00000461798 CEP104O60308 925 aa8.82□□□□□ -1
BRCA1-207ENST00000461798 NDUFS3O75489 264 aa8.82□□□□□ -1
BRCA1-207ENST00000461798 KLF7O75840 302 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms