RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 MTX3Q5HYI7 312 aa13.78□□□□□ -0.2
ERCC3-205ENST00000460485 LCN8Q6JVE9 175 aa13.78□□□□□ -0.2
ERCC3-205ENST00000460485 LIPIQ6XZB0 460 aa13.78□□□□□ -0.2
ERCC3-205ENST00000460485 HSD11B1LQ7Z5J1 315 aa13.78□□□□□ -0.2
ERCC3-205ENST00000460485 DHFR2Q86XF0 187 aa13.78□□□□□ -0.2
ERCC3-205ENST00000460485 PDSS2Q86YH6 399 aa13.78□□□□□ -0.2
ERCC3-205ENST00000460485 L3MBTL4Q8NA19 623 aa13.78□□□□□ -0.2
ERCC3-205ENST00000460485 TNIP2Q8NFZ5 429 aa13.78□□□□□ -0.2
ERCC3-205ENST00000460485 OR9I1Q8NGQ6 314 aa13.78□□□□□ -0.2
ERCC3-205ENST00000460485 ITFG1Q8TB96 612 aa13.78□□□□□ -0.2
ERCC3-205ENST00000460485 ING5Q8WYH8 240 aa13.78□□□□□ -0.2
ERCC3-205ENST00000460485 STARD8Q92502 1023 aa13.78□□□□□ -0.2
ERCC3-205ENST00000460485 ELMO1Q92556 727 aa13.78□□□□□ -0.2
ERCC3-205ENST00000460485 TMEM159Q96B96 161 aa13.78□□□□□ -0.2
ERCC3-205ENST00000460485 LRRC58Q96CX6 371 aa13.78□□□□□ -0.2
ERCC3-205ENST00000460485 DTD2Q96FN9 168 aa13.78□□□□□ -0.2
ERCC3-205ENST00000460485 DYRK4Q9NR20 520 aa13.78□□□□□ -0.2
ERCC3-205ENST00000460485 DNAJC11Q9NVH1 559 aa13.78□□□□□ -0.2
ERCC3-205ENST00000460485 DLL3Q9NYJ7 618 aa13.78□□□□□ -0.2
ERCC3-205ENST00000460485 ACTR3BQ9P1U1 418 aa13.78□□□□□ -0.2
ERCC3-205ENST00000460485 PDE10AQ9Y233 779 aa13.78□□□□□ -0.2
ERCC3-205ENST00000460485 BPTFQ12830 3046 aa13.77□□□□□ -0.2
ERCC3-205ENST00000460485 A0A0U1RQS6 177 aa13.77□□□□□ -0.21
ERCC3-205ENST00000460485 ACACBO00763 2458 aa13.77□□□□□ -0.21
ERCC3-205ENST00000460485 PSIP1O75475 530 aaKnown RBP13.77□□□□□ -0.21
ERCC3-205ENST00000460485 GUCA1CO95843 209 aa13.77□□□□□ -0.21
ERCC3-205ENST00000460485 CAPNS1P04632 268 aa13.77□□□□□ -0.21
ERCC3-205ENST00000460485 GPIP06744 558 aa13.77□□□□□ -0.21
ERCC3-205ENST00000460485 CTSLP07711 333 aa13.77□□□□□ -0.21
ERCC3-205ENST00000460485 UMPSP11172 480 aa13.77□□□□□ -0.21
ERCC3-205ENST00000460485 FCGR1AP12314 374 aa13.77□□□□□ -0.21
ERCC3-205ENST00000460485 HSD3B1P14060 373 aa13.77□□□□□ -0.21
ERCC3-205ENST00000460485 HSD3B2P26439 372 aa13.77□□□□□ -0.21
ERCC3-205ENST00000460485 MAP4P27816 1152 aaKnown RBP13.77□□□□□ -0.21
ERCC3-205ENST00000460485 PRDX3P30048 256 aaKnown RBP13.77□□□□□ -0.21
ERCC3-205ENST00000460485 SLC7A1P30825 629 aa13.77□□□□□ -0.21
ERCC3-205ENST00000460485 GNPDA1P46926 289 aa13.77□□□□□ -0.21
ERCC3-205ENST00000460485 SLC7A2P52569 658 aa13.77□□□□□ -0.21
ERCC3-205ENST00000460485 NFYCQ13952 458 aa13.77□□□□□ -0.21
ERCC3-205ENST00000460485 CKAP5Q14008 2032 aa13.77□□□□□ -0.21
ERCC3-205ENST00000460485 ANGPT1Q15389 498 aa13.77□□□□□ -0.21
ERCC3-205ENST00000460485 IMPG1Q17R60 797 aa13.77□□□□□ -0.21
ERCC3-205ENST00000460485 DPY19L1Q2PZI1 675 aa13.77□□□□□ -0.21
ERCC3-205ENST00000460485 TMEM52BQ4KMG9 183 aa13.77□□□□□ -0.21
ERCC3-205ENST00000460485 FNDC3BQ53EP0 1204 aaKnown RBP13.77□□□□□ -0.21
ERCC3-205ENST00000460485 FAM46CQ5VWP2 391 aa13.77□□□□□ -0.21
ERCC3-205ENST00000460485 LIPJQ5W064 366 aa13.77□□□□□ -0.21
ERCC3-205ENST00000460485 CES5AQ6NT32 575 aa13.77□□□□□ -0.21
ERCC3-205ENST00000460485 Q6ZSR9 355 aa13.77□□□□□ -0.21
ERCC3-205ENST00000460485 PARS2Q7L3T8 475 aaKnown RBP13.77□□□□□ -0.21
ERCC3-205ENST00000460485 SPATA24Q86W54 205 aa13.77□□□□□ -0.21
ERCC3-205ENST00000460485 PTRH1Q86Y79 214 aaKnown RBP13.77□□□□□ -0.21
ERCC3-205ENST00000460485 NAT16Q8N8M0 369 aa13.77□□□□□ -0.21
ERCC3-205ENST00000460485 ICA1LQ8NDH6 482 aa13.77□□□□□ -0.21
ERCC3-205ENST00000460485 OR2T34Q8NGX1 318 aa13.77□□□□□ -0.21
ERCC3-205ENST00000460485 OR2T11Q8NH01 316 aa13.77□□□□□ -0.21
ERCC3-205ENST00000460485 OR2T3Q8NH03 318 aa13.77□□□□□ -0.21
ERCC3-205ENST00000460485 CYB5D2Q8WUJ1 264 aa13.77□□□□□ -0.21
ERCC3-205ENST00000460485 AP2M1Q96CW1 435 aa13.77□□□□□ -0.21
ERCC3-205ENST00000460485 CCDC138Q96M89 665 aa13.77□□□□□ -0.21
ERCC3-205ENST00000460485 COQ10AQ96MF6 247 aa13.77□□□□□ -0.21
ERCC3-205ENST00000460485 SH3GL1Q99961 368 aa13.77□□□□□ -0.21
ERCC3-205ENST00000460485 CCM2Q9BSQ5 444 aa13.77□□□□□ -0.21
ERCC3-205ENST00000460485 RIOK2Q9BVS4 552 aaKnown RBP13.77□□□□□ -0.21
ERCC3-205ENST00000460485 ABCG8Q9H221 673 aa13.77□□□□□ -0.21
ERCC3-205ENST00000460485 ACTR8Q9H981 624 aa13.77□□□□□ -0.21
ERCC3-205ENST00000460485 SLC52A3Q9NQ40 469 aa13.77□□□□□ -0.21
ERCC3-205ENST00000460485 CEP250Q9BV73 2442 aa13.76□□□□□ -0.21
ERCC3-205ENST00000460485 CACNA1GO43497 2377 aa13.76□□□□□ -0.21
ERCC3-205ENST00000460485 A0A1B0GTL3 188 aa13.76□□□□□ -0.21
ERCC3-205ENST00000460485 MAGEA13PA6NCF6 341 aa13.76□□□□□ -0.21
ERCC3-205ENST00000460485 C2CD4DB7Z1M9 353 aa13.76□□□□□ -0.21
ERCC3-205ENST00000460485 MANBAO00462 879 aa13.76□□□□□ -0.21
ERCC3-205ENST00000460485 KPNA3O00505 521 aaPredicted RBP13.76□□□□□ -0.21
ERCC3-205ENST00000460485 PRMT3O60678 531 aa13.76□□□□□ -0.21
ERCC3-205ENST00000460485 IL6P05231 212 aa13.76□□□□□ -0.21
ERCC3-205ENST00000460485 CA5AP35218 305 aa13.76□□□□□ -0.21
ERCC3-205ENST00000460485 DIO3P55073 304 aa13.76□□□□□ -0.21
ERCC3-205ENST00000460485 MRPS22P82650 360 aaKnown RBP13.76□□□□□ -0.21
ERCC3-205ENST00000460485 FCHO2Q0JRZ9 810 aa13.76□□□□□ -0.21
ERCC3-205ENST00000460485 HSPA14Q0VDF9 509 aa13.76□□□□□ -0.21
ERCC3-205ENST00000460485 CSTF3Q12996 717 aaKnown RBP13.76□□□□□ -0.21
ERCC3-205ENST00000460485 GTF2H3Q13889 308 aa13.76□□□□□ -0.21
ERCC3-205ENST00000460485 ACOX1Q15067 660 aa13.76□□□□□ -0.21
ERCC3-205ENST00000460485 FXNQ16595 210 aa13.76□□□□□ -0.21
ERCC3-205ENST00000460485 AP5B1Q2VPB7 878 aa13.76□□□□□ -0.21
ERCC3-205ENST00000460485 FAM78AQ5JUQ0 283 aa13.76□□□□□ -0.21
ERCC3-205ENST00000460485 CYP20A1Q6UW02 462 aa13.76□□□□□ -0.21
ERCC3-205ENST00000460485 Q6ZVL8 140 aa13.76□□□□□ -0.21
ERCC3-205ENST00000460485 FKBP9P1Q75LS8 142 aa13.76□□□□□ -0.21
ERCC3-205ENST00000460485 GPR149Q86SP6 731 aa13.76□□□□□ -0.21
ERCC3-205ENST00000460485 SFRP1Q8N474 314 aa13.76□□□□□ -0.21
ERCC3-205ENST00000460485 TERB1Q8NA31 727 aa13.76□□□□□ -0.21
ERCC3-205ENST00000460485 OR8J3Q8NGG0 315 aa13.76□□□□□ -0.21
ERCC3-205ENST00000460485 CSGALNACT1Q8TDX6 532 aa13.76□□□□□ -0.21
ERCC3-205ENST00000460485 LINC00615Q96LM1 132 aaPredicted RBP13.76□□□□□ -0.21
ERCC3-205ENST00000460485 CNTNAP3BQ96NU0 1288 aa13.76□□□□□ -0.21
ERCC3-205ENST00000460485 HDAC8Q9BY41 377 aa13.76□□□□□ -0.21
ERCC3-205ENST00000460485 CNTNAP3Q9BZ76 1288 aa13.76□□□□□ -0.21
ERCC3-205ENST00000460485 OSBPL6Q9BZF3 934 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms