RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 CHRNB3Q05901 458 aa15.08■□□□□ 0
LMNB1-203ENST00000460265 SELENBP1Q13228 472 aa15.08■□□□□ 0
LMNB1-203ENST00000460265 ZNF846Q147U1 533 aa15.08■□□□□ 0
LMNB1-203ENST00000460265 ABRAXAS2Q15018 415 aa15.08■□□□□ 0
LMNB1-203ENST00000460265 DPY19L3Q6ZPD9 716 aa15.08■□□□□ 0
LMNB1-203ENST00000460265 SNX20Q7Z614 316 aa15.08■□□□□ 0
LMNB1-203ENST00000460265 BTLAQ7Z6A9 289 aa15.08■□□□□ 0
LMNB1-203ENST00000460265 OR7G1Q8NGA0 311 aa15.08■□□□□ 0
LMNB1-203ENST00000460265 MROQ9BYG7 248 aa15.08■□□□□ 0
LMNB1-203ENST00000460265 CCDC90BQ9GZT6 254 aa15.08■□□□□ 0
LMNB1-203ENST00000460265 TP63Q9H3D4 680 aaPredicted RBP15.08■□□□□ 0
LMNB1-203ENST00000460265 RABL2AQ9UBK7 228 aaPredicted RBP15.08■□□□□ 0
LMNB1-203ENST00000460265 SUCOQ9UBS9 1254 aaKnown RBP15.08■□□□□ 0
LMNB1-203ENST00000460265 BAG5Q9UL15 447 aa15.08■□□□□ 0
LMNB1-203ENST00000460265 B3GNT3Q9Y2A9 372 aa15.08■□□□□ 0
LMNB1-203ENST00000460265 DHRS7Q9Y394 339 aa15.08■□□□□ 0
LMNB1-203ENST00000460265 N6AMT1Q9Y5N5 214 aa15.08■□□□□ 0
LMNB1-203ENST00000460265 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.08■□□□□ 0
LMNB1-203ENST00000460265 H3BNC9 293 aa15.08■□□□□ 0
LMNB1-203ENST00000460265 CLOCKO15516 846 aa15.08■□□□□ 0
LMNB1-203ENST00000460265 RGS14O43566 566 aa15.08■□□□□ 0
LMNB1-203ENST00000460265 IGHA2P01877 340 aa15.08■□□□□ 0
LMNB1-203ENST00000460265 BPIP17213 487 aa15.08■□□□□ 0
LMNB1-203ENST00000460265 PTPN2P17706 415 aa15.08■□□□□ 0
LMNB1-203ENST00000460265 DCKP27707 260 aa15.08■□□□□ 0
LMNB1-203ENST00000460265 HPCAL1P37235 193 aa15.08■□□□□ 0
LMNB1-203ENST00000460265 ERVK-8P63133 956 aa15.08■□□□□ 0
LMNB1-203ENST00000460265 RFTN2Q52LD8 501 aaPredicted RBP15.08■□□□□ 0
LMNB1-203ENST00000460265 GAREM2Q75VX8 874 aa15.08■□□□□ 0
LMNB1-203ENST00000460265 DCAF4L2Q8NA75 395 aa15.08■□□□□ 0
LMNB1-203ENST00000460265 OR10A6Q8NH74 314 aa15.08■□□□□ 0
LMNB1-203ENST00000460265 HMGCLL1Q8TB92 370 aa15.08■□□□□ 0
LMNB1-203ENST00000460265 PEX13Q92968 403 aa15.08■□□□□ 0
LMNB1-203ENST00000460265 TCF25Q9BQ70 676 aa15.08■□□□□ 0
LMNB1-203ENST00000460265 LINC00597Q9H2U6 94 aa15.08■□□□□ 0
LMNB1-203ENST00000460265 COMMD8Q9NX08 183 aa15.08■□□□□ 0
LMNB1-203ENST00000460265 MAP10Q9P2G4 905 aa15.08■□□□□ 0
LMNB1-203ENST00000460265 ANAPC2Q9UJX6 822 aa15.08■□□□□ 0
LMNB1-203ENST00000460265 PTBP2Q9UKA9 531 aaKnown RBP15.08■□□□□ 0
LMNB1-203ENST00000460265 OAZ3Q9UMX2 235 aa15.08■□□□□ 0
LMNB1-203ENST00000460265 PCDHB1Q9Y5F3 818 aa15.08■□□□□ 0
LMNB1-203ENST00000460265 ARPC2O15144 300 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 LDLRP01130 860 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 OR56A5P0C7T3 313 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 LAG3P18627 525 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 SLC7A1P30825 629 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 OPRL1P41146 370 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 GTF2H3Q13889 308 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 TYSND1Q2T9J0 566 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 CYP20A1Q6UW02 462 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 SLC22A15Q8IZD6 547 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 ITFG1Q8TB96 612 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 LKAAEAR1Q8TD35 194 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 SNX19Q92543 992 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 ROPN1LQ96C74 230 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 NRBF2Q96F24 287 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 ZDHHC4Q9NPG8 344 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 LHX3Q9UBR4 397 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 A0A1W2PP18 115 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 MYO1GB0I1T2 1018 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 TOR1BO14657 336 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 AXIN1O15169 862 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 TRBC1P01850 177 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 KRT6AP02538 564 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 KRT6BP04259 564 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 PPP3CCP48454 512 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 KRT6CP48668 564 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 HNRNPFP52597 415 aaKnown RBP15.07■□□□□ 0
LMNB1-203ENST00000460265 INO80DQ53TQ3 878 aaPredicted RBP15.07■□□□□ 0
LMNB1-203ENST00000460265 PRMT9Q6P2P2 845 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 APOLD1Q96LR9 279 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 OR52E6Q96RD3 313 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 SUV39H2Q9H5I1 410 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 CMTM6Q9NX76 183 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 PRR23AA6NEV1 266 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 NPIPB15A6NHN6 443 aaPredicted RBP15.07■□□□□ 0
LMNB1-203ENST00000460265 H0YJX3 145 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 PER2O15055 1255 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 ADH1AP07327 375 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 CR2P20023 1033 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 SLC6A2P23975 617 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 NTHL1P78549 312 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 ACOX1Q15067 660 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 ATP13A5Q4VNC0 1218 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 DGKKQ5KSL6 1271 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 KANK2Q63ZY3 851 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 SPATA19Q7Z5L4 167 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 DSG4Q86SJ6 1040 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 ZNF347Q96SE7 839 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 POLE4Q9NR33 117 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 ANKMY1Q9P2S6 941 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 INVSQ9Y283 1065 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 WNT6Q9Y6F9 365 aa15.07■□□□□ 0
LMNB1-203ENST00000460265 OAS3Q9Y6K5 1087 aaKnown RBP15.07■□□□□ 0
LMNB1-203ENST00000460265 BBIP1A8MTZ0 92 aa15.06■□□□□ 0
LMNB1-203ENST00000460265 LEFTY2O00292 366 aa15.06■□□□□ 0
LMNB1-203ENST00000460265 ACOT8O14734 319 aa15.06■□□□□ 0
LMNB1-203ENST00000460265 ZNF682O95780 498 aa15.06■□□□□ 0
LMNB1-203ENST00000460265 MSH3P20585 1137 aa15.06■□□□□ 0
LMNB1-203ENST00000460265 UGT3A2Q3SY77 523 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms