RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 MMEL1Q495T6 779 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 ATP6AP1LQ52LC2 224 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 XKR6Q5GH73 641 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 SPDYAQ5MJ70 313 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 C6orf163Q5TEZ5 329 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 CACHD1Q5VU97 1274 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 LIPJQ5W064 366 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 LYSMD4Q5XG99 296 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 SLC30A9Q6PML9 568 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 AGTRAPQ6RW13 159 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 IL27RAQ6UWB1 636 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 TMEM207Q6UWW9 146 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 NAPRTQ6XQN6 538 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 TRPM8Q7Z2W7 1104 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 ADCK2Q7Z695 626 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 PIGWQ7Z7B1 504 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 C17orf64Q86WR6 236 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 C1orf210Q8IVY1 113 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 DEFB119Q8N690 84 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 ZNF655Q8N720 491 aaPredicted RBP5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 OR5K2Q8NHB8 316 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 CEP76Q8TAP6 659 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 LCN9Q8WX39 176 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 SMPDL3AQ92484 453 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 N4BP2L2Q92802 583 aaPredicted RBP5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 TSACCQ96A04 125 aaPredicted RBP5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 RHBDF1Q96CC6 855 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 FBXL8Q96CD0 374 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 TUBGCP3Q96CW5 907 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 CMTM5Q96DZ9 223 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 AHCYL2Q96HN2 611 aaKnown RBP5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 GPR78Q96P69 363 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 TMEM237Q96Q45 408 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 ZBTB18Q99592 522 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 LGR4Q9BXB1 951 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 SHCBP1LQ9BZQ2 653 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 ATG10Q9H0Y0 220 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 DUSP15Q9H1R2 295 aaPredicted RBP5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 SRMSQ9H3Y6 488 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 NOL11Q9H8H0 719 aaKnown RBP5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 SLCO1B3Q9NPD5 702 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 TCF7L2Q9NQB0 619 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 TXLNGQ9NUQ3 528 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 INTS7Q9NVH2 962 aaKnown RBP5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 NDE1Q9NXR1 346 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 AHSPQ9NZD4 102 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 GPRC5BQ9NZH0 403 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 SPATA7Q9P0W8 599 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 GALPQ9UBC7 116 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 HEY2Q9UBP5 337 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 APOBEC3BQ9UH17 382 aaKnown RBP5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 PTBP2Q9UKA9 531 aaKnown RBP5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 FBXO4Q9UKT5 387 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 CNOT6Q9ULM6 557 aaKnown RBP5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 KCNK6Q9Y257 313 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 EIF3LQ9Y262 564 aaKnown RBP5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 INVSQ9Y283 1065 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 PRKAB1Q9Y478 270 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 PCDHGA2Q9Y5H1 932 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 DGKBQ9Y6T7 804 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 RALGAPA1Q6GYQ0 2036 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 ARHGAP10A1A4S6 786 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 TMEM202A6NGA9 273 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 URADA6NGE7 173 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 CCT8L1PA6NM43 557 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 RHPN2P1A8MT19 583 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 ISM1B1AKI9 464 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 TARM1B6A8C7 271 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 MATN2O00339 956 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 UBDO15205 165 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 SPINT1O43278 529 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 SKAP2O75563 359 aaPredicted RBP5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 LYPLA1O75608 230 aaPredicted RBP5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 SOD1P00441 154 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 SERPINA6P08185 405 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 SYPP08247 313 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 THRAP10827 490 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 F3P13726 295 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 LBPP18428 481 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 ADSLP30566 484 aaPredicted RBP5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 SERPINB1P30740 379 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 GGT5P36269 586 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 CSRP3P50461 194 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 PGGT1BP53609 377 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 PFN3P60673 137 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 CTBSQ01459 385 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 TGM3Q08188 693 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 SF3A3Q12874 501 aaKnown RBP eCLIP5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 STX5Q13190 355 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 CHIT1Q13231 466 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 PRKG2Q13237 762 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 SUZ12Q15022 739 aaKnown RBP5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 SF1Q15637 639 aaKnown RBP5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 PDCD2Q16342 344 aaPredicted RBP5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 PTCHD3Q3KNS1 767 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 INAVAQ3KP66 663 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 KHDC1Q4VXA5 237 aaKnown RBP5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 UNC50Q53HI1 259 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms