RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 AARS2Q5JTZ9 985 aaKnown RBP15.22■□□□□ 0.03
CHCHD3-204ENST00000457942 LCN10Q6JVE6 187 aa15.22■□□□□ 0.03
CHCHD3-204ENST00000457942 NLRP9Q7RTR0 991 aa15.22■□□□□ 0.03
CHCHD3-204ENST00000457942 OTUD6BQ8N6M0 293 aa15.22■□□□□ 0.03
CHCHD3-204ENST00000457942 OR5K2Q8NHB8 316 aa15.22■□□□□ 0.03
CHCHD3-204ENST00000457942 PRR7Q8TB68 274 aa15.22■□□□□ 0.03
CHCHD3-204ENST00000457942 RANBP9Q96S59 729 aa15.22■□□□□ 0.03
CHCHD3-204ENST00000457942 MFRPQ9BY79 579 aa15.22■□□□□ 0.03
CHCHD3-204ENST00000457942 NLNQ9BYT8 704 aa15.22■□□□□ 0.03
CHCHD3-204ENST00000457942 PCMTD2Q9NV79 361 aa15.22■□□□□ 0.03
CHCHD3-204ENST00000457942 G3BP2Q9UN86 482 aaKnown RBP15.22■□□□□ 0.03
CHCHD3-204ENST00000457942 PADI2Q9Y2J8 665 aa15.22■□□□□ 0.03
CHCHD3-204ENST00000457942 TCAF1Q9Y4C2 921 aa15.22■□□□□ 0.03
CHCHD3-204ENST00000457942 A0A0J9YY10 115 aa15.21■□□□□ 0.03
CHCHD3-204ENST00000457942 SLC5A10A0PJK1 596 aa15.21■□□□□ 0.03
CHCHD3-204ENST00000457942 ZNF749O43361 778 aa15.21■□□□□ 0.03
CHCHD3-204ENST00000457942 SNRNP200O75643 2136 aaKnown RBP15.21■□□□□ 0.03
CHCHD3-204ENST00000457942 OR2B3O76000 313 aa15.21■□□□□ 0.03
CHCHD3-204ENST00000457942 MSL3P1P0C860 447 aa15.21■□□□□ 0.03
CHCHD3-204ENST00000457942 ACADLP28330 430 aa15.21■□□□□ 0.03
CHCHD3-204ENST00000457942 RORAP35398 523 aa15.21■□□□□ 0.03
CHCHD3-204ENST00000457942 SESN2P58004 480 aaPredicted RBP15.21■□□□□ 0.03
CHCHD3-204ENST00000457942 BASP1P80723 227 aaKnown RBP15.21■□□□□ 0.03
CHCHD3-204ENST00000457942 HSPA14Q0VDF9 509 aa15.21■□□□□ 0.03
CHCHD3-204ENST00000457942 TMED2Q15363 201 aa15.21■□□□□ 0.03
CHCHD3-204ENST00000457942 ZNF789Q5FWF6 425 aa15.21■□□□□ 0.03
CHCHD3-204ENST00000457942 FAM69BQ5VUD6 431 aa15.21■□□□□ 0.03
CHCHD3-204ENST00000457942 FAM198BQ6UWH4 519 aa15.21■□□□□ 0.03
CHCHD3-204ENST00000457942 ZNF517Q6ZMY9 492 aaPredicted RBP15.21■□□□□ 0.03
CHCHD3-204ENST00000457942 GSTA5Q7RTV2 222 aa15.21■□□□□ 0.03
CHCHD3-204ENST00000457942 MAMDC2Q7Z304 686 aaPredicted RBP15.21■□□□□ 0.03
CHCHD3-204ENST00000457942 SRRM1Q8IYB3 904 aaKnown RBP15.21■□□□□ 0.03
CHCHD3-204ENST00000457942 CFAP61Q8NHU2 1237 aa15.21■□□□□ 0.03
CHCHD3-204ENST00000457942 GSDMBQ8TAX9 411 aa15.21■□□□□ 0.03
CHCHD3-204ENST00000457942 TCTN2Q96GX1 697 aa15.21■□□□□ 0.03
CHCHD3-204ENST00000457942 ING2Q9H160 280 aa15.21■□□□□ 0.03
CHCHD3-204ENST00000457942 GRPEL1Q9HAV7 217 aa15.21■□□□□ 0.03
CHCHD3-204ENST00000457942 CATSPERZQ9NTU4 200 aa15.21■□□□□ 0.03
CHCHD3-204ENST00000457942 SPHK1Q9NYA1 384 aa15.21■□□□□ 0.03
CHCHD3-204ENST00000457942 OR6C2Q9NZP2 312 aa15.21■□□□□ 0.03
CHCHD3-204ENST00000457942 GPN3Q9UHW5 284 aaPredicted RBP15.21■□□□□ 0.03
CHCHD3-204ENST00000457942 TCFL5Q9UL49 500 aa15.21■□□□□ 0.03
CHCHD3-204ENST00000457942 RP1L1Q8IWN7 2480 aaPredicted RBP15.2■□□□□ 0.02
CHCHD3-204ENST00000457942 TCP11X1B4DZS4 312 aa15.2■□□□□ 0.02
CHCHD3-204ENST00000457942 BHMG1C9JSJ3 638 aaPredicted RBP15.2■□□□□ 0.02
CHCHD3-204ENST00000457942 TMEM63AO94886 807 aa15.2■□□□□ 0.02
CHCHD3-204ENST00000457942 RPN2P04844 631 aa15.2■□□□□ 0.02
CHCHD3-204ENST00000457942 APOA4P06727 396 aa15.2■□□□□ 0.02
CHCHD3-204ENST00000457942 PSMA3P25788 255 aa15.2■□□□□ 0.02
CHCHD3-204ENST00000457942 NCF4Q15080 339 aa15.2■□□□□ 0.02
CHCHD3-204ENST00000457942 C1orf189Q5VU69 101 aa15.2■□□□□ 0.02
CHCHD3-204ENST00000457942 LDB1Q86U70 411 aaPredicted RBP15.2■□□□□ 0.02
CHCHD3-204ENST00000457942 TAX1BP1Q86VP1 789 aa15.2■□□□□ 0.02
CHCHD3-204ENST00000457942 RAB43Q86YS6 212 aa15.2■□□□□ 0.02
CHCHD3-204ENST00000457942 ZNF778Q96MU6 729 aa15.2■□□□□ 0.02
CHCHD3-204ENST00000457942 OR2A14Q96R47 310 aa15.2■□□□□ 0.02
CHCHD3-204ENST00000457942 DPH2Q9BQC3 489 aaPredicted RBP15.2■□□□□ 0.02
CHCHD3-204ENST00000457942 LZTFL1Q9NQ48 299 aa15.2■□□□□ 0.02
CHCHD3-204ENST00000457942 TXLNGQ9NUQ3 528 aa15.2■□□□□ 0.02
CHCHD3-204ENST00000457942 CIDEBQ9UHD4 219 aa15.2■□□□□ 0.02
CHCHD3-204ENST00000457942 RIMKLBQ9ULI2 386 aa15.2■□□□□ 0.02
CHCHD3-204ENST00000457942 MAP4K5Q9Y4K4 846 aa15.2■□□□□ 0.02
CHCHD3-204ENST00000457942 SORBS2O94875 1100 aaKnown RBP15.19■□□□□ 0.02
CHCHD3-204ENST00000457942 ZSCAN5DPP0CG00 497 aa15.19■□□□□ 0.02
CHCHD3-204ENST00000457942 TNFRSF8P28908 595 aa15.19■□□□□ 0.02
CHCHD3-204ENST00000457942 OTX2P32243 289 aa15.19■□□□□ 0.02
CHCHD3-204ENST00000457942 SEMA3AQ14563 771 aa15.19■□□□□ 0.02
CHCHD3-204ENST00000457942 DNAJC21Q5F1R6 531 aaKnown RBP15.19■□□□□ 0.02
CHCHD3-204ENST00000457942 PCID2Q5JVF3 399 aa15.19■□□□□ 0.02
CHCHD3-204ENST00000457942 MEI1Q5TIA1 1274 aa15.19■□□□□ 0.02
CHCHD3-204ENST00000457942 MLIPQ5VWP3 458 aa15.19■□□□□ 0.02
CHCHD3-204ENST00000457942 PTRHD1Q6GMV3 140 aaKnown RBP15.19■□□□□ 0.02
CHCHD3-204ENST00000457942 ZNF534Q76KX8 674 aa15.19■□□□□ 0.02
CHCHD3-204ENST00000457942 GLIS1Q8NBF1 620 aa15.19■□□□□ 0.02
CHCHD3-204ENST00000457942 LKAAEAR1Q8TD35 194 aa15.19■□□□□ 0.02
CHCHD3-204ENST00000457942 SKA2Q8WVK7 121 aaPredicted RBP15.19■□□□□ 0.02
CHCHD3-204ENST00000457942 UBE2Q2Q8WVN8 375 aa15.19■□□□□ 0.02
CHCHD3-204ENST00000457942 ASZ1Q8WWH4 475 aa15.19■□□□□ 0.02
CHCHD3-204ENST00000457942 C17orf62Q9BQA9 187 aa15.19■□□□□ 0.02
CHCHD3-204ENST00000457942 FAM60AQ9NP50 221 aa15.19■□□□□ 0.02
CHCHD3-204ENST00000457942 CUEDC1Q9NWM3 386 aaPredicted RBP15.19■□□□□ 0.02
CHCHD3-204ENST00000457942 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.19■□□□□ 0.02
CHCHD3-204ENST00000457942 AP1M2Q9Y6Q5 423 aa15.19■□□□□ 0.02
CHCHD3-204ENST00000457942 SEC16AO15027 2179 aa15.19■□□□□ 0.02
CHCHD3-204ENST00000457942 CACNA1DQ01668 2161 aa15.19■□□□□ 0.02
CHCHD3-204ENST00000457942 MED13Q9UHV7 2174 aa15.19■□□□□ 0.02
CHCHD3-204ENST00000457942 SHANK1Q9Y566 2161 aa15.19■□□□□ 0.02
CHCHD3-204ENST00000457942 FBN2P35556 2912 aa15.18■□□□□ 0.02
CHCHD3-204ENST00000457942 IQCF5A8MTL0 148 aa15.18■□□□□ 0.02
CHCHD3-204ENST00000457942 ZSCAN9O15535 394 aaPredicted RBP15.18■□□□□ 0.02
CHCHD3-204ENST00000457942 CCDC175P0C221 793 aa15.18■□□□□ 0.02
CHCHD3-204ENST00000457942 PKLRP30613 574 aa15.18■□□□□ 0.02
CHCHD3-204ENST00000457942 CCR7P32248 378 aa15.18■□□□□ 0.02
CHCHD3-204ENST00000457942 RPL22P35268 128 aaKnown RBP15.18■□□□□ 0.02
CHCHD3-204ENST00000457942 TTPAP49638 278 aa15.18■□□□□ 0.02
CHCHD3-204ENST00000457942 RAB28P51157 221 aa15.18■□□□□ 0.02
CHCHD3-204ENST00000457942 TERF1P54274 439 aa15.18■□□□□ 0.02
CHCHD3-204ENST00000457942 RRADP55042 308 aa15.18■□□□□ 0.02
CHCHD3-204ENST00000457942 CRADDP78560 199 aa15.18■□□□□ 0.02
CHCHD3-204ENST00000457942 ACVR1Q04771 509 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms