RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 ZNHIT2Q9UHR6 403 aa16.28■□□□□ 0.2
CCDC43-202ENST00000457422 SNX6Q9UNH7 406 aa16.28■□□□□ 0.2
CCDC43-202ENST00000457422 TULP3O75386 442 aa16.27■□□□□ 0.2
CCDC43-202ENST00000457422 PDYNP01213 254 aa16.27■□□□□ 0.2
CCDC43-202ENST00000457422 BCKDHAP12694 445 aa16.27■□□□□ 0.2
CCDC43-202ENST00000457422 CDH1P12830 882 aa16.27■□□□□ 0.2
CCDC43-202ENST00000457422 EPCAMP16422 314 aa16.27■□□□□ 0.2
CCDC43-202ENST00000457422 GGT1P19440 569 aa16.27■□□□□ 0.2
CCDC43-202ENST00000457422 GSTT1P30711 240 aa16.27■□□□□ 0.2
CCDC43-202ENST00000457422 BMPR1AP36894 532 aa16.27■□□□□ 0.2
CCDC43-202ENST00000457422 CPSF6Q16630 551 aaKnown RBP eCLIP16.27■□□□□ 0.2
CCDC43-202ENST00000457422 ARSIQ5FYB1 569 aa16.27■□□□□ 0.2
CCDC43-202ENST00000457422 HENMT1Q5T8I9 393 aaKnown RBP16.27■□□□□ 0.2
CCDC43-202ENST00000457422 SLC30A9Q6PML9 568 aa16.27■□□□□ 0.2
CCDC43-202ENST00000457422 METTL25Q8N6Q8 603 aa16.27■□□□□ 0.2
CCDC43-202ENST00000457422 DNAJB8Q8NHS0 232 aa16.27■□□□□ 0.2
CCDC43-202ENST00000457422 OSCP1Q8WVF1 389 aa16.27■□□□□ 0.2
CCDC43-202ENST00000457422 TIFAQ96CG3 184 aa16.27■□□□□ 0.2
CCDC43-202ENST00000457422 MAGEB10Q96LZ2 347 aaPredicted RBP16.27■□□□□ 0.2
CCDC43-202ENST00000457422 ZNF583Q96ND8 569 aa16.27■□□□□ 0.2
CCDC43-202ENST00000457422 PCDH12Q9NPG4 1184 aa16.27■□□□□ 0.2
CCDC43-202ENST00000457422 ZNF639Q9UID6 485 aa16.27■□□□□ 0.2
CCDC43-202ENST00000457422 OAZ3Q9UMX2 235 aa16.27■□□□□ 0.2
CCDC43-202ENST00000457422 AP3M1Q9Y2T2 418 aa16.27■□□□□ 0.2
CCDC43-202ENST00000457422 KRT87PA6NCN2 255 aa16.26■□□□□ 0.19
CCDC43-202ENST00000457422 PABPN1LA6NDY0 278 aaKnown RBP16.26■□□□□ 0.19
CCDC43-202ENST00000457422 QSOX1O00391 747 aa16.26■□□□□ 0.19
CCDC43-202ENST00000457422 DFNA5O60443 496 aa16.26■□□□□ 0.19
CCDC43-202ENST00000457422 H6PDO95479 791 aa16.26■□□□□ 0.19
CCDC43-202ENST00000457422 ACPPP15309 386 aa16.26■□□□□ 0.19
CCDC43-202ENST00000457422 TIMP2P16035 220 aa16.26■□□□□ 0.19
CCDC43-202ENST00000457422 NNMTP40261 264 aa16.26■□□□□ 0.19
CCDC43-202ENST00000457422 PTCHD3Q3KNS1 767 aa16.26■□□□□ 0.19
CCDC43-202ENST00000457422 SPANXN4Q5MJ08 99 aa16.26■□□□□ 0.19
CCDC43-202ENST00000457422 KRT80Q6KB66 452 aa16.26■□□□□ 0.19
CCDC43-202ENST00000457422 NEK5Q6P3R8 708 aa16.26■□□□□ 0.19
CCDC43-202ENST00000457422 RIMKLAQ8IXN7 391 aa16.26■□□□□ 0.19
CCDC43-202ENST00000457422 FAM9CQ8IZT9 166 aa16.26■□□□□ 0.19
CCDC43-202ENST00000457422 MCOLN3Q8TDD5 553 aa16.26■□□□□ 0.19
CCDC43-202ENST00000457422 BPIFB1Q8TDL5 484 aa16.26■□□□□ 0.19
CCDC43-202ENST00000457422 HCAR2Q8TDS4 363 aa16.26■□□□□ 0.19
CCDC43-202ENST00000457422 SELENOMQ8WWX9 145 aa16.26■□□□□ 0.19
CCDC43-202ENST00000457422 LRIG1Q96JA1 1093 aa16.26■□□□□ 0.19
CCDC43-202ENST00000457422 ZSCAN5AQ9BUG6 496 aa16.26■□□□□ 0.19
CCDC43-202ENST00000457422 MTG2Q9H4K7 406 aa16.26■□□□□ 0.19
CCDC43-202ENST00000457422 OLAHQ9NV23 265 aa16.26■□□□□ 0.19
CCDC43-202ENST00000457422 DKK3Q9UBP4 350 aa16.26■□□□□ 0.19
CCDC43-202ENST00000457422 FBXO10Q9UK96 956 aa16.26■□□□□ 0.19
CCDC43-202ENST00000457422 CROCCQ5TZA2 2017 aa16.26■□□□□ 0.19
CCDC43-202ENST00000457422 H3BNH8 94 aa16.26■□□□□ 0.19
CCDC43-202ENST00000457422 PDLIM1O00151 329 aa16.26■□□□□ 0.19
CCDC43-202ENST00000457422 FTH1P02794 183 aa16.26■□□□□ 0.19
CCDC43-202ENST00000457422 CTSLP07711 333 aa16.26■□□□□ 0.19
CCDC43-202ENST00000457422 ANXA6P08133 673 aa16.26■□□□□ 0.19
CCDC43-202ENST00000457422 HNRNPA1P09651 372 aaKnown RBP eCLIP16.26■□□□□ 0.19
CCDC43-202ENST00000457422 PRPS2P11908 318 aa16.26■□□□□ 0.19
CCDC43-202ENST00000457422 ETV3P41162 512 aa16.26■□□□□ 0.19
CCDC43-202ENST00000457422 POLE2P56282 527 aa16.26■□□□□ 0.19
CCDC43-202ENST00000457422 RPS14P62263 151 aaKnown RBP16.26■□□□□ 0.19
CCDC43-202ENST00000457422 PLOD1Q02809 727 aaPredicted RBP16.26■□□□□ 0.19
CCDC43-202ENST00000457422 KCNC3Q14003 757 aa16.26■□□□□ 0.19
CCDC43-202ENST00000457422 Q6ZVL8 140 aa16.26■□□□□ 0.19
CCDC43-202ENST00000457422 DPPA4Q7L190 304 aa16.26■□□□□ 0.19
CCDC43-202ENST00000457422 KRTCAP2Q8N6L1 136 aa16.26■□□□□ 0.19
CCDC43-202ENST00000457422 SPPL3Q8TCT6 385 aa16.26■□□□□ 0.19
CCDC43-202ENST00000457422 ING5Q8WYH8 240 aa16.26■□□□□ 0.19
CCDC43-202ENST00000457422 ARMC5Q96C12 935 aa16.26■□□□□ 0.19
CCDC43-202ENST00000457422 DGCR14Q96DF8 476 aaKnown RBP16.26■□□□□ 0.19
CCDC43-202ENST00000457422 RAD9AQ99638 391 aa16.26■□□□□ 0.19
CCDC43-202ENST00000457422 SH3GL1Q99961 368 aa16.26■□□□□ 0.19
CCDC43-202ENST00000457422 P2RY13Q9BPV8 354 aa16.26■□□□□ 0.19
CCDC43-202ENST00000457422 ADI1Q9BV57 179 aa16.26■□□□□ 0.19
CCDC43-202ENST00000457422 GORASP2Q9H8Y8 452 aa16.26■□□□□ 0.19
CCDC43-202ENST00000457422 DNAJC11Q9NVH1 559 aa16.26■□□□□ 0.19
CCDC43-202ENST00000457422 TMED5Q9Y3A6 229 aa16.26■□□□□ 0.19
CCDC43-202ENST00000457422 COMMD3-BMI1R4GMX3 469 aa16.26■□□□□ 0.19
CCDC43-202ENST00000457422 V9GYQ6 96 aa16.26■□□□□ 0.19
CCDC43-202ENST00000457422 KIAA0100Q14667 2235 aaKnown RBP16.25■□□□□ 0.19
CCDC43-202ENST00000457422 TRBV5-3A0A0A0MS03 114 aa16.25■□□□□ 0.19
CCDC43-202ENST00000457422 RNF103-CHMP3A0A140T963 221 aa16.25■□□□□ 0.19
CCDC43-202ENST00000457422 SLCO2B1O94956 709 aa16.25■□□□□ 0.19
CCDC43-202ENST00000457422 LDLRP01130 860 aa16.25■□□□□ 0.19
CCDC43-202ENST00000457422 CEBPBP17676 345 aa16.25■□□□□ 0.19
CCDC43-202ENST00000457422 MYF6P23409 242 aa16.25■□□□□ 0.19
CCDC43-202ENST00000457422 WEE1P30291 646 aa16.25■□□□□ 0.19
CCDC43-202ENST00000457422 NR1H2P55055 460 aa16.25■□□□□ 0.19
CCDC43-202ENST00000457422 CLDN8P56748 225 aa16.25■□□□□ 0.19
CCDC43-202ENST00000457422 CYP4F3Q08477 520 aa16.25■□□□□ 0.19
CCDC43-202ENST00000457422 MERTKQ12866 999 aa16.25■□□□□ 0.19
CCDC43-202ENST00000457422 NADK2Q4G0N4 442 aa16.25■□□□□ 0.19
CCDC43-202ENST00000457422 ZNF805Q5CZA5 627 aa16.25■□□□□ 0.19
CCDC43-202ENST00000457422 ZNF648Q5T619 568 aaPredicted RBP16.25■□□□□ 0.19
CCDC43-202ENST00000457422 ZNF697Q5TEC3 545 aa16.25■□□□□ 0.19
CCDC43-202ENST00000457422 NECAB2Q7Z6G3 386 aa16.25■□□□□ 0.19
CCDC43-202ENST00000457422 MSRB3Q8IXL7 192 aa16.25■□□□□ 0.19
CCDC43-202ENST00000457422 BEND7Q8N7W2 519 aaPredicted RBP16.25■□□□□ 0.19
CCDC43-202ENST00000457422 TNIP2Q8NFZ5 429 aa16.25■□□□□ 0.19
CCDC43-202ENST00000457422 OR52E4Q8NGH9 312 aa16.25■□□□□ 0.19
CCDC43-202ENST00000457422 CLHC1Q8NHS4 586 aa16.25■□□□□ 0.19
CCDC43-202ENST00000457422 ASZ1Q8WWH4 475 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms