RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 RAB40ALP0C0E4 278 aa17.26■□□□□ 0.35
MSH6-207ENST00000456246 PVRP15151 417 aa17.26■□□□□ 0.35
MSH6-207ENST00000456246 OGNP20774 298 aaKnown RBP17.26■□□□□ 0.35
MSH6-207ENST00000456246 ARNTP27540 789 aa17.26■□□□□ 0.35
MSH6-207ENST00000456246 PKLRP30613 574 aa17.26■□□□□ 0.35
MSH6-207ENST00000456246 RORAP35398 523 aa17.26■□□□□ 0.35
MSH6-207ENST00000456246 FNTAP49354 379 aa17.26■□□□□ 0.35
MSH6-207ENST00000456246 EIF3BP55884 814 aaKnown RBP17.26■□□□□ 0.35
MSH6-207ENST00000456246 KYNUQ16719 465 aa17.26■□□□□ 0.35
MSH6-207ENST00000456246 ZNF789Q5FWF6 425 aa17.26■□□□□ 0.35
MSH6-207ENST00000456246 TTC27Q6P3X3 843 aa17.26■□□□□ 0.35
MSH6-207ENST00000456246 CASC4Q6P4E1 433 aa17.26■□□□□ 0.35
MSH6-207ENST00000456246 CDHR3Q6ZTQ4 885 aa17.26■□□□□ 0.35
MSH6-207ENST00000456246 ACTRT1Q8TDG2 376 aa17.26■□□□□ 0.35
MSH6-207ENST00000456246 FOPNLQ96NB1 174 aa17.26■□□□□ 0.35
MSH6-207ENST00000456246 FARSAQ9Y285 508 aaKnown RBP17.26■□□□□ 0.35
MSH6-207ENST00000456246 SEC16AO15027 2179 aa17.25■□□□□ 0.35
MSH6-207ENST00000456246 FAM237BA0A1B0GVD1 139 aa17.25■□□□□ 0.35
MSH6-207ENST00000456246 CDC14CA4D256 554 aa17.25■□□□□ 0.35
MSH6-207ENST00000456246 ISM1B1AKI9 464 aa17.25■□□□□ 0.35
MSH6-207ENST00000456246 MKRN2OSH3BPM6 223 aa17.25■□□□□ 0.35
MSH6-207ENST00000456246 PHF2O75151 1096 aa17.25■□□□□ 0.35
MSH6-207ENST00000456246 S1PR4O95977 384 aa17.25■□□□□ 0.35
MSH6-207ENST00000456246 SPTBP11277 2137 aa17.25■□□□□ 0.35
MSH6-207ENST00000456246 ATP5DP30049 168 aa17.25■□□□□ 0.35
MSH6-207ENST00000456246 CCNFP41002 786 aa17.25■□□□□ 0.35
MSH6-207ENST00000456246 PMS2P54278 862 aa17.25■□□□□ 0.35
MSH6-207ENST00000456246 UGT8Q16880 541 aa17.25■□□□□ 0.35
MSH6-207ENST00000456246 ATP1A1-AS1Q5TC04 95 aa17.25■□□□□ 0.35
MSH6-207ENST00000456246 VRK3Q8IV63 474 aa17.25■□□□□ 0.35
MSH6-207ENST00000456246 REXO1L1PQ8IX06 675 aa17.25■□□□□ 0.35
MSH6-207ENST00000456246 KRT222Q8N1A0 295 aa17.25■□□□□ 0.35
MSH6-207ENST00000456246 SLC35F6Q8N357 371 aa17.25■□□□□ 0.35
MSH6-207ENST00000456246 FLVCR1-AS1Q8TAF5 88 aa17.25■□□□□ 0.35
MSH6-207ENST00000456246 MAGEC3Q8TD91 643 aa17.25■□□□□ 0.35
MSH6-207ENST00000456246 LPGAT1Q92604 370 aa17.25■□□□□ 0.35
MSH6-207ENST00000456246 RAD51AP1Q96B01 352 aa17.25■□□□□ 0.35
MSH6-207ENST00000456246 MS4A14Q96JA4 679 aa17.25■□□□□ 0.35
MSH6-207ENST00000456246 OSBPL9Q96SU4 736 aa17.25■□□□□ 0.35
MSH6-207ENST00000456246 NRTNQ99748 197 aa17.25■□□□□ 0.35
MSH6-207ENST00000456246 NLNQ9BYT8 704 aa17.25■□□□□ 0.35
MSH6-207ENST00000456246 CHST8Q9H2A9 424 aa17.25■□□□□ 0.35
MSH6-207ENST00000456246 PCMTD2Q9NV79 361 aa17.25■□□□□ 0.35
MSH6-207ENST00000456246 INTS7Q9NVH2 962 aaKnown RBP17.25■□□□□ 0.35
MSH6-207ENST00000456246 INTS10Q9NVR2 710 aaKnown RBP17.25■□□□□ 0.35
MSH6-207ENST00000456246 SPHK1Q9NYA1 384 aa17.25■□□□□ 0.35
MSH6-207ENST00000456246 MAN2B2Q9Y2E5 1009 aa17.25■□□□□ 0.35
MSH6-207ENST00000456246 SDR42E2A6NKP2 422 aa17.24■□□□□ 0.35
MSH6-207ENST00000456246 SUV39H1O43463 412 aa17.24■□□□□ 0.35
MSH6-207ENST00000456246 RFPL1O75677 317 aa17.24■□□□□ 0.35
MSH6-207ENST00000456246 TMEM63AO94886 807 aa17.24■□□□□ 0.35
MSH6-207ENST00000456246 TPBGLP0DKB5 382 aa17.24■□□□□ 0.35
MSH6-207ENST00000456246 AGXTP21549 392 aa17.24■□□□□ 0.35
MSH6-207ENST00000456246 CD9P21926 228 aa17.24■□□□□ 0.35
MSH6-207ENST00000456246 FAM199XQ6PEV8 388 aaPredicted RBP17.24■□□□□ 0.35
MSH6-207ENST00000456246 TRIM73Q86UV7 250 aa17.24■□□□□ 0.35
MSH6-207ENST00000456246 CAND1Q86VP6 1230 aaKnown RBP17.24■□□□□ 0.35
MSH6-207ENST00000456246 APLFQ8IW19 511 aaPredicted RBP17.24■□□□□ 0.35
MSH6-207ENST00000456246 LMNTD2Q8IXW0 634 aa17.24■□□□□ 0.35
MSH6-207ENST00000456246 SYTL1Q8IYJ3 562 aa17.24■□□□□ 0.35
MSH6-207ENST00000456246 SLC38A9Q8NBW4 561 aa17.24■□□□□ 0.35
MSH6-207ENST00000456246 OR2L8Q8NGY9 312 aa17.24■□□□□ 0.35
MSH6-207ENST00000456246 CFAP61Q8NHU2 1237 aa17.24■□□□□ 0.35
MSH6-207ENST00000456246 ANP32BQ92688 251 aaKnown RBP17.24■□□□□ 0.35
MSH6-207ENST00000456246 KLHL25Q9H0H3 589 aa17.24■□□□□ 0.35
MSH6-207ENST00000456246 ANAPC2Q9UJX6 822 aa17.24■□□□□ 0.35
MSH6-207ENST00000456246 SLC39A10Q9ULF5 831 aa17.24■□□□□ 0.35
MSH6-207ENST00000456246 PLAGL1Q9UM63 463 aa17.24■□□□□ 0.35
MSH6-207ENST00000456246 SNX12Q9UMY4 172 aa17.24■□□□□ 0.35
MSH6-207ENST00000456246 SRPK3Q9UPE1 567 aa17.24■□□□□ 0.35
MSH6-207ENST00000456246 C9J4A7 227 aa17.23■□□□□ 0.35
MSH6-207ENST00000456246 RASGRF2O14827 1237 aa17.23■□□□□ 0.35
MSH6-207ENST00000456246 ZNF749O43361 778 aa17.23■□□□□ 0.35
MSH6-207ENST00000456246 OR2B3O76000 313 aa17.23■□□□□ 0.35
MSH6-207ENST00000456246 FURINP09958 794 aa17.23■□□□□ 0.35
MSH6-207ENST00000456246 LACTB2Q53H82 288 aaPredicted RBP17.23■□□□□ 0.35
MSH6-207ENST00000456246 ANKRD22Q5VYY1 191 aa17.23■□□□□ 0.35
MSH6-207ENST00000456246 NEPROQ6NW34 567 aa17.23■□□□□ 0.35
MSH6-207ENST00000456246 TLDC1Q6P9B6 456 aa17.23■□□□□ 0.35
MSH6-207ENST00000456246 CES3Q6UWW8 571 aa17.23■□□□□ 0.35
MSH6-207ENST00000456246 CILP2Q8IUL8 1156 aa17.23■□□□□ 0.35
MSH6-207ENST00000456246 PROKR1Q8TCW9 393 aa17.23■□□□□ 0.35
MSH6-207ENST00000456246 SKA2Q8WVK7 121 aaPredicted RBP17.23■□□□□ 0.35
MSH6-207ENST00000456246 ABHD17AQ96GS6 310 aa17.23■□□□□ 0.35
MSH6-207ENST00000456246 BIRC8Q96P09 236 aa17.23■□□□□ 0.35
MSH6-207ENST00000456246 SERPINB12Q96P63 405 aa17.23■□□□□ 0.35
MSH6-207ENST00000456246 DHRS4Q9BTZ2 278 aa17.23■□□□□ 0.35
MSH6-207ENST00000456246 MENTQ9BUN1 341 aa17.23■□□□□ 0.35
MSH6-207ENST00000456246 AKIRIN1Q9H9L7 192 aaPredicted RBP17.23■□□□□ 0.35
MSH6-207ENST00000456246 SNX7Q9UNH6 387 aa17.23■□□□□ 0.35
MSH6-207ENST00000456246 PLCL2Q9UPR0 1127 aa17.23■□□□□ 0.35
MSH6-207ENST00000456246 PADI2Q9Y2J8 665 aa17.23■□□□□ 0.35
MSH6-207ENST00000456246 NEU2Q9Y3R4 380 aa17.23■□□□□ 0.35
MSH6-207ENST00000456246 AVILO75366 819 aa17.22■□□□□ 0.35
MSH6-207ENST00000456246 CD63P08962 238 aa17.22■□□□□ 0.35
MSH6-207ENST00000456246 TCP1P17987 556 aaKnown RBP17.22■□□□□ 0.35
MSH6-207ENST00000456246 PEBP1P30086 187 aaKnown RBP17.22■□□□□ 0.35
MSH6-207ENST00000456246 GABRA4P48169 554 aa17.22■□□□□ 0.35
MSH6-207ENST00000456246 TERF1P54274 439 aa17.22■□□□□ 0.35
MSH6-207ENST00000456246 THOC5Q13769 683 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms