RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 FLRT2O43155 660 aa10.93□□□□□ -0.66
TRAF4-206ENST00000454852 NUDT21O43809 227 aaKnown RBP10.93□□□□□ -0.66
TRAF4-206ENST00000454852 DLX3O60479 287 aa10.93□□□□□ -0.66
TRAF4-206ENST00000454852 SMIM24O75264 130 aa10.93□□□□□ -0.66
TRAF4-206ENST00000454852 VIPP01282 170 aa10.93□□□□□ -0.66
TRAF4-206ENST00000454852 BPGMP07738 259 aa10.93□□□□□ -0.66
TRAF4-206ENST00000454852 CPA3P15088 417 aa10.93□□□□□ -0.66
TRAF4-206ENST00000454852 PNLIPP16233 465 aa10.93□□□□□ -0.66
TRAF4-206ENST00000454852 BDKRB1P46663 353 aa10.93□□□□□ -0.66
TRAF4-206ENST00000454852 SLC6A12P48065 614 aa10.93□□□□□ -0.66
TRAF4-206ENST00000454852 SERPINB4P48594 390 aa10.93□□□□□ -0.66
TRAF4-206ENST00000454852 RAB28P51157 221 aa10.93□□□□□ -0.66
TRAF4-206ENST00000454852 ATXN3P54252 364 aaPredicted RBP10.93□□□□□ -0.66
TRAF4-206ENST00000454852 PCLAFQ15004 111 aa10.93□□□□□ -0.66
TRAF4-206ENST00000454852 SETDB1Q15047 1291 aa10.93□□□□□ -0.66
TRAF4-206ENST00000454852 PCBP2Q15366 365 aaKnown RBP eCLIP10.93□□□□□ -0.66
TRAF4-206ENST00000454852 CCDC6Q16204 474 aa10.93□□□□□ -0.66
TRAF4-206ENST00000454852 ZXDCQ2QGD7 858 aaPredicted RBP10.93□□□□□ -0.66
TRAF4-206ENST00000454852 DEFB133Q30KQ1 61 aa10.93□□□□□ -0.66
TRAF4-206ENST00000454852 INAVAQ3KP66 663 aa10.93□□□□□ -0.66
TRAF4-206ENST00000454852 CCSMST1Q4G0I0 132 aa10.93□□□□□ -0.66
TRAF4-206ENST00000454852 DUS1LQ6P1R4 473 aaKnown RBP10.93□□□□□ -0.66
TRAF4-206ENST00000454852 TMEM26Q6ZUK4 368 aa10.93□□□□□ -0.66
TRAF4-206ENST00000454852 FRA10AC1Q70Z53 315 aa10.93□□□□□ -0.66
TRAF4-206ENST00000454852 ARMC2Q8NEN0 867 aa10.93□□□□□ -0.66
TRAF4-206ENST00000454852 OR52E1Q8NGJ3 308 aa10.93□□□□□ -0.66
TRAF4-206ENST00000454852 OR56A3Q8NH54 315 aa10.93□□□□□ -0.66
TRAF4-206ENST00000454852 CFAP61Q8NHU2 1237 aa10.93□□□□□ -0.66
TRAF4-206ENST00000454852 PATE1Q8WXA2 126 aa10.93□□□□□ -0.66
TRAF4-206ENST00000454852 L3HYPDHQ96EM0 354 aa10.93□□□□□ -0.66
TRAF4-206ENST00000454852 FERD3LQ96RJ6 166 aa10.93□□□□□ -0.66
TRAF4-206ENST00000454852 PKP4Q99569 1192 aa10.93□□□□□ -0.66
TRAF4-206ENST00000454852 GTPBP2Q9BX10 602 aaKnown RBP10.93□□□□□ -0.66
TRAF4-206ENST00000454852 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.93□□□□□ -0.66
TRAF4-206ENST00000454852 C12orf65Q9H3J6 166 aaKnown RBP10.93□□□□□ -0.66
TRAF4-206ENST00000454852 STN1Q9H668 368 aaKnown RBP10.93□□□□□ -0.66
TRAF4-206ENST00000454852 PARD6AQ9NPB6 346 aa10.93□□□□□ -0.66
TRAF4-206ENST00000454852 OXSMQ9NWU1 459 aa10.93□□□□□ -0.66
TRAF4-206ENST00000454852 ARL15Q9NXU5 204 aa10.93□□□□□ -0.66
TRAF4-206ENST00000454852 OR6C2Q9NZP2 312 aa10.93□□□□□ -0.66
TRAF4-206ENST00000454852 SIRPGQ9P1W8 387 aa10.93□□□□□ -0.66
TRAF4-206ENST00000454852 STOX2Q9P2F5 926 aaPredicted RBP10.93□□□□□ -0.66
TRAF4-206ENST00000454852 CPSF2Q9P2I0 782 aaKnown RBP10.93□□□□□ -0.66
TRAF4-206ENST00000454852 TNPO3Q9Y5L0 923 aaKnown RBP10.93□□□□□ -0.66
TRAF4-206ENST00000454852 CFAP20Q9Y6A4 193 aaKnown RBP10.93□□□□□ -0.66
TRAF4-206ENST00000454852 CABIN1Q9Y6J0 2220 aa10.93□□□□□ -0.66
TRAF4-206ENST00000454852 ARID1BQ8NFD5 2236 aaPredicted RBP10.92□□□□□ -0.66
TRAF4-206ENST00000454852 LY6G6EA0A0G2JKS1 128 aa10.92□□□□□ -0.66
TRAF4-206ENST00000454852 PABPN1LA6NDY0 278 aaKnown RBP10.92□□□□□ -0.66
TRAF4-206ENST00000454852 E7ENX8 843 aa10.92□□□□□ -0.66
TRAF4-206ENST00000454852 UBXN8O00124 270 aa10.92□□□□□ -0.66
TRAF4-206ENST00000454852 PPM1DO15297 605 aa10.92□□□□□ -0.66
TRAF4-206ENST00000454852 TAPBPO15533 448 aa10.92□□□□□ -0.66
TRAF4-206ENST00000454852 SLC16A8O95907 504 aa10.92□□□□□ -0.66
TRAF4-206ENST00000454852 MYL2P10916 166 aa10.92□□□□□ -0.66
TRAF4-206ENST00000454852 GLB1P16278 677 aa10.92□□□□□ -0.66
TRAF4-206ENST00000454852 IMPA1P29218 277 aa10.92□□□□□ -0.66
TRAF4-206ENST00000454852 PKLRP30613 574 aa10.92□□□□□ -0.66
TRAF4-206ENST00000454852 HPDP32754 393 aaPredicted RBP10.92□□□□□ -0.66
TRAF4-206ENST00000454852 SHMT2P34897 504 aa10.92□□□□□ -0.66
TRAF4-206ENST00000454852 GRK6P43250 576 aa10.92□□□□□ -0.66
TRAF4-206ENST00000454852 GPR3P46089 330 aa10.92□□□□□ -0.66
TRAF4-206ENST00000454852 EPHA4P54764 986 aa10.92□□□□□ -0.66
TRAF4-206ENST00000454852 IL9RQ01113 521 aa10.92□□□□□ -0.66
TRAF4-206ENST00000454852 HHEXQ03014 270 aa10.92□□□□□ -0.66
TRAF4-206ENST00000454852 TAP2Q03519 686 aa10.92□□□□□ -0.66
TRAF4-206ENST00000454852 PCDH1Q08174 1060 aa10.92□□□□□ -0.66
TRAF4-206ENST00000454852 SPEM2Q0P670 501 aa10.92□□□□□ -0.66
TRAF4-206ENST00000454852 ASPHQ12797 758 aa10.92□□□□□ -0.66
TRAF4-206ENST00000454852 SF3A2Q15428 464 aaKnown RBP10.92□□□□□ -0.66
TRAF4-206ENST00000454852 TCEA2Q15560 299 aa10.92□□□□□ -0.66
TRAF4-206ENST00000454852 PROX2Q3B8N5 592 aa10.92□□□□□ -0.66
TRAF4-206ENST00000454852 ANKS6Q68DC2 871 aa10.92□□□□□ -0.66
TRAF4-206ENST00000454852 PRR23CQ6ZRP0 262 aa10.92□□□□□ -0.66
TRAF4-206ENST00000454852 GATAD2AQ86YP4 633 aa10.92□□□□□ -0.66
TRAF4-206ENST00000454852 SFTPA2Q8IWL1 248 aa10.92□□□□□ -0.66
TRAF4-206ENST00000454852 TRIM48Q8IWZ4 208 aa10.92□□□□□ -0.66
TRAF4-206ENST00000454852 SLC35F3Q8IY50 421 aa10.92□□□□□ -0.66
TRAF4-206ENST00000454852 FBXO39Q8N4B4 442 aa10.92□□□□□ -0.66
TRAF4-206ENST00000454852 RAB42Q8N4Z0 105 aa10.92□□□□□ -0.66
TRAF4-206ENST00000454852 KYQ8NBH2 561 aa10.92□□□□□ -0.66
TRAF4-206ENST00000454852 OR2I1PQ8NGU4 316 aa10.92□□□□□ -0.66
TRAF4-206ENST00000454852 OR2L8Q8NGY9 312 aa10.92□□□□□ -0.66
TRAF4-206ENST00000454852 RAB3IL1Q8TBN0 382 aa10.92□□□□□ -0.66
TRAF4-206ENST00000454852 ZNF480Q8WV37 535 aa10.92□□□□□ -0.66
TRAF4-206ENST00000454852 SELENOSQ9BQE4 189 aa10.92□□□□□ -0.66
TRAF4-206ENST00000454852 EDEM2Q9BV94 578 aa10.92□□□□□ -0.66
TRAF4-206ENST00000454852 SGPP1Q9BX95 441 aa10.92□□□□□ -0.66
TRAF4-206ENST00000454852 EPB41L1Q9H4G0 881 aa10.92□□□□□ -0.66
TRAF4-206ENST00000454852 TMEM9BQ9NQ34 198 aa10.92□□□□□ -0.66
TRAF4-206ENST00000454852 CD274Q9NZQ7 290 aa10.92□□□□□ -0.66
TRAF4-206ENST00000454852 LNPEPQ9UIQ6 1025 aa10.92□□□□□ -0.66
TRAF4-206ENST00000454852 TSR3Q9UJK0 312 aaKnown RBP10.92□□□□□ -0.66
TRAF4-206ENST00000454852 ICKQ9UPZ9 632 aa10.92□□□□□ -0.66
TRAF4-206ENST00000454852 U3KQA8 63 aa10.92□□□□□ -0.66
TRAF4-206ENST00000454852 VPS13AQ96RL7 3174 aa10.91□□□□□ -0.66
TRAF4-206ENST00000454852 EME2A4GXA9 379 aaPredicted RBP10.91□□□□□ -0.66
TRAF4-206ENST00000454852 SUPT3HB4E1H0 165 aa10.91□□□□□ -0.66
TRAF4-206ENST00000454852 KLF11O14901 512 aa10.91□□□□□ -0.66
TRAF4-206ENST00000454852 SIGLEC6O43699 453 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms