RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 TFR2Q9UP52 801 aa22.89■■□□□ 1.25
LYSMD2-202ENST00000454181 PIKFYVEQ9Y2I7 2098 aa22.88■■□□□ 1.25
LYSMD2-202ENST00000454181 WIPF3A6NGB9 483 aa22.88■■□□□ 1.25
LYSMD2-202ENST00000454181 F8W8V4 182 aa22.88■■□□□ 1.25
LYSMD2-202ENST00000454181 ITGA3P26006 1051 aa22.88■■□□□ 1.25
LYSMD2-202ENST00000454181 PLOD1Q02809 727 aaPredicted RBP22.88■■□□□ 1.25
LYSMD2-202ENST00000454181 POU6F1Q14863 301 aa22.88■■□□□ 1.25
LYSMD2-202ENST00000454181 PARP6Q2NL67 630 aa22.88■■□□□ 1.25
LYSMD2-202ENST00000454181 IRAK1BP1Q5VVH5 260 aa22.88■■□□□ 1.25
LYSMD2-202ENST00000454181 LRRC40Q9H9A6 602 aa22.88■■□□□ 1.25
LYSMD2-202ENST00000454181 CENPEQ02224 2701 aa22.88■■□□□ 1.25
LYSMD2-202ENST00000454181 DOPEY1Q5JWR5 2465 aa22.88■■□□□ 1.25
LYSMD2-202ENST00000454181 AP2A1O95782 977 aa22.87■■□□□ 1.25
LYSMD2-202ENST00000454181 CLDN1O95832 211 aa22.87■■□□□ 1.25
LYSMD2-202ENST00000454181 PTPN7P35236 360 aa22.87■■□□□ 1.25
LYSMD2-202ENST00000454181 DCTP40126 519 aa22.87■■□□□ 1.25
LYSMD2-202ENST00000454181 RWDD2BP57060 319 aa22.87■■□□□ 1.25
LYSMD2-202ENST00000454181 AIMP2Q13155 320 aaKnown RBP22.87■■□□□ 1.25
LYSMD2-202ENST00000454181 ITIH4Q14624 930 aa22.87■■□□□ 1.25
LYSMD2-202ENST00000454181 KIR2DS3Q14952 304 aa22.87■■□□□ 1.25
LYSMD2-202ENST00000454181 SLC5A12Q1EHB4 618 aa22.87■■□□□ 1.25
LYSMD2-202ENST00000454181 PPP1R32Q7Z5V6 425 aa22.87■■□□□ 1.25
LYSMD2-202ENST00000454181 PIANPQ8IYJ0 282 aa22.87■■□□□ 1.25
LYSMD2-202ENST00000454181 CCDC170Q8IYT3 715 aa22.87■■□□□ 1.25
LYSMD2-202ENST00000454181 TTC13Q8NBP0 860 aa22.87■■□□□ 1.25
LYSMD2-202ENST00000454181 OR5K2Q8NHB8 316 aa22.87■■□□□ 1.25
LYSMD2-202ENST00000454181 DENND1AQ8TEH3 1009 aa22.87■■□□□ 1.25
LYSMD2-202ENST00000454181 DLG3Q92796 817 aa22.87■■□□□ 1.25
LYSMD2-202ENST00000454181 CALR3Q96L12 384 aaKnown RBP22.87■■□□□ 1.25
LYSMD2-202ENST00000454181 TTC1Q99614 292 aa22.87■■□□□ 1.25
LYSMD2-202ENST00000454181 H3BMH7 237 aa22.86■■□□□ 1.25
LYSMD2-202ENST00000454181 AGPSO00116 658 aa22.86■■□□□ 1.25
LYSMD2-202ENST00000454181 HCRTR1O43613 425 aa22.86■■□□□ 1.25
LYSMD2-202ENST00000454181 OR56A5P0C7T3 313 aa22.86■■□□□ 1.25
LYSMD2-202ENST00000454181 PIM1P11309 404 aaPredicted RBP22.86■■□□□ 1.25
LYSMD2-202ENST00000454181 ACADLP28330 430 aa22.86■■□□□ 1.25
LYSMD2-202ENST00000454181 CYLC1P35663 651 aaPredicted RBP22.86■■□□□ 1.25
LYSMD2-202ENST00000454181 GABRA4P48169 554 aa22.86■■□□□ 1.25
LYSMD2-202ENST00000454181 SOX8P57073 446 aa22.86■■□□□ 1.25
LYSMD2-202ENST00000454181 MRPL14Q6P1L8 145 aaKnown RBP22.86■■□□□ 1.25
LYSMD2-202ENST00000454181 Q6ZS92 163 aa22.86■■□□□ 1.25
LYSMD2-202ENST00000454181 PLAGL1Q9UM63 463 aa22.86■■□□□ 1.25
LYSMD2-202ENST00000454181 PRSS21Q9Y6M0 314 aa22.86■■□□□ 1.25
LYSMD2-202ENST00000454181 GOLGA6L9A6NEM1 432 aa22.85■■□□□ 1.25
LYSMD2-202ENST00000454181 PSMD3O43242 534 aa22.85■■□□□ 1.25
LYSMD2-202ENST00000454181 MSNP26038 577 aaKnown RBP22.85■■□□□ 1.25
LYSMD2-202ENST00000454181 ARSFP54793 590 aa22.85■■□□□ 1.25
LYSMD2-202ENST00000454181 TBX2Q13207 712 aaPredicted RBP22.85■■□□□ 1.25
LYSMD2-202ENST00000454181 DNAJC22Q8N4W6 341 aa22.85■■□□□ 1.25
LYSMD2-202ENST00000454181 RNF214Q8ND24 703 aa22.85■■□□□ 1.25
LYSMD2-202ENST00000454181 UBE2Q2Q8WVN8 375 aa22.85■■□□□ 1.25
LYSMD2-202ENST00000454181 NACC2Q96BF6 587 aa22.85■■□□□ 1.25
LYSMD2-202ENST00000454181 EURLQ9NYK6 297 aa22.85■■□□□ 1.25
LYSMD2-202ENST00000454181 CDC23Q9UJX2 597 aa22.85■■□□□ 1.25
LYSMD2-202ENST00000454181 PCDHGA10Q9Y5H3 936 aa22.85■■□□□ 1.25
LYSMD2-202ENST00000454181 CACNA1DQ01668 2161 aa22.84■■□□□ 1.25
LYSMD2-202ENST00000454181 MASP2O00187 686 aa22.84■■□□□ 1.25
LYSMD2-202ENST00000454181 IPO7O95373 1038 aaKnown RBP22.84■■□□□ 1.25
LYSMD2-202ENST00000454181 GAS8O95995 478 aa22.84■■□□□ 1.25
LYSMD2-202ENST00000454181 UMODP07911 640 aa22.84■■□□□ 1.25
LYSMD2-202ENST00000454181 P3H1Q32P28 736 aa22.84■■□□□ 1.25
LYSMD2-202ENST00000454181 KCTD11Q693B1 232 aa22.84■■□□□ 1.25
LYSMD2-202ENST00000454181 NAPRTQ6XQN6 538 aa22.84■■□□□ 1.25
LYSMD2-202ENST00000454181 MICALCLQ6ZW33 695 aa22.84■■□□□ 1.25
LYSMD2-202ENST00000454181 CUZD1Q86UP6 607 aa22.84■■□□□ 1.25
LYSMD2-202ENST00000454181 FAM71DQ8N9W8 422 aa22.84■■□□□ 1.25
LYSMD2-202ENST00000454181 RANBP9Q96S59 729 aa22.84■■□□□ 1.25
LYSMD2-202ENST00000454181 WDR77Q9BQA1 342 aaPredicted RBP22.84■■□□□ 1.25
LYSMD2-202ENST00000454181 TSPY26PQ9H489 355 aa22.84■■□□□ 1.25
LYSMD2-202ENST00000454181 CAMSAP3Q9P1Y5 1249 aaPredicted RBP22.84■■□□□ 1.25
LYSMD2-202ENST00000454181 IMPACTQ9P2X3 320 aa22.84■■□□□ 1.25
LYSMD2-202ENST00000454181 PCSK5Q92824 1860 aa22.83■■□□□ 1.25
LYSMD2-202ENST00000454181 ITPR2Q14571 2701 aa22.83■■□□□ 1.25
LYSMD2-202ENST00000454181 SLC5A10A0PJK1 596 aa22.83■■□□□ 1.25
LYSMD2-202ENST00000454181 CNOT3O75175 753 aaKnown RBP22.83■■□□□ 1.25
LYSMD2-202ENST00000454181 CTSBP07858 339 aa22.83■■□□□ 1.25
LYSMD2-202ENST00000454181 CSE1LP55060 971 aaKnown RBP22.83■■□□□ 1.25
LYSMD2-202ENST00000454181 FOXL2P58012 376 aa22.83■■□□□ 1.25
LYSMD2-202ENST00000454181 PACS1Q6VY07 963 aa22.83■■□□□ 1.25
LYSMD2-202ENST00000454181 TTLL10Q6ZVT0 673 aa22.83■■□□□ 1.25
LYSMD2-202ENST00000454181 KLHDC8BQ8IXV7 354 aa22.83■■□□□ 1.25
LYSMD2-202ENST00000454181 FLVCR1-AS1Q8TAF5 88 aa22.83■■□□□ 1.25
LYSMD2-202ENST00000454181 INPP5DQ92835 1189 aa22.83■■□□□ 1.25
LYSMD2-202ENST00000454181 SLC22A18Q96BI1 424 aa22.83■■□□□ 1.25
LYSMD2-202ENST00000454181 VPS50Q96JG6 964 aa22.83■■□□□ 1.25
LYSMD2-202ENST00000454181 ZBTB20Q9HC78 741 aaPredicted RBP22.83■■□□□ 1.25
LYSMD2-202ENST00000454181 INTS7Q9NVH2 962 aaKnown RBP22.83■■□□□ 1.25
LYSMD2-202ENST00000454181 PIH1D1Q9NWS0 290 aaKnown RBP22.83■■□□□ 1.25
LYSMD2-202ENST00000454181 FBXL4Q9UKA2 621 aa22.83■■□□□ 1.25
LYSMD2-202ENST00000454181 BHMG1C9JSJ3 638 aaPredicted RBP22.82■■□□□ 1.24
LYSMD2-202ENST00000454181 METTL18O95568 372 aa22.82■■□□□ 1.24
LYSMD2-202ENST00000454181 RPN2P04844 631 aa22.82■■□□□ 1.24
LYSMD2-202ENST00000454181 TPBGLP0DKB5 382 aa22.82■■□□□ 1.24
LYSMD2-202ENST00000454181 MAGP20916 626 aa22.82■■□□□ 1.24
LYSMD2-202ENST00000454181 MMP11P24347 488 aa22.82■■□□□ 1.24
LYSMD2-202ENST00000454181 RAB28P51157 221 aa22.82■■□□□ 1.24
LYSMD2-202ENST00000454181 DNAJC21Q5F1R6 531 aaKnown RBP22.82■■□□□ 1.24
LYSMD2-202ENST00000454181 CRB2Q5IJ48 1285 aa22.82■■□□□ 1.24
LYSMD2-202ENST00000454181 AGAP7PQ5VUJ5 663 aa22.82■■□□□ 1.24
LYSMD2-202ENST00000454181 PRAMEF13Q5VWM6 474 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms