RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 EIF3DO15371 548 aaKnown RBP eCLIP5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 GPR39O43194 453 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 CLDN11O75508 207 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 RECQL5O94762 991 aaPredicted RBP5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 FBXO21O94952 628 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 POP4O95707 220 aaKnown RBP5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 MOCS2O96007 188 aaPredicted RBP5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 TNNI1P19237 187 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 SLC9A1P19634 815 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 RPS6KB1P23443 525 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 HOXD13P35453 343 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 PPM1FP49593 454 aaPredicted RBP5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 DNA2P51530 1060 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 SUOXP51687 545 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 ARG2P78540 354 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 ARF5P84085 180 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 HSF1Q00613 529 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 HYAL4Q2M3T9 481 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 ZNF699Q32M78 642 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 PTCHD3Q3KNS1 767 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 FILIP1LQ4L180 1135 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 PYCR3Q53H96 274 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 ZNF648Q5T619 568 aaPredicted RBP5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 KAZNQ674X7 775 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 TMEM211Q6ICI0 200 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 KIRREL2Q6UWL6 708 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 GDPD4Q6W3E5 623 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 FAM92BQ6ZTR7 304 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 TMEM26Q6ZUK4 368 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 FRMD7Q6ZUT3 714 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 TMEM126BQ8IUX1 230 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 PHYKPLQ8IUZ5 450 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 ZNF683Q8IZ20 524 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 DCAF4L2Q8NA75 395 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 SIDT2Q8NBJ9 832 aaKnown RBP5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 OR8K5Q8NH50 307 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 FNIP1Q8TF40 1166 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 PIGTQ969N2 578 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 ZBTB8AQ96BR9 441 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 PTERQ96BW5 349 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 PERPQ96FX8 193 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 MAP3K3Q99759 626 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 SARGQ9BW04 601 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 BTBD2Q9BX70 525 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 BEX2Q9BXY8 128 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 FGFBP2Q9BYJ0 223 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 TNMDQ9H2S6 317 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 FOXP1Q9H334 677 aaPredicted RBP5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 WDR26Q9H7D7 661 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 SUDS3Q9H7L9 328 aaPredicted RBP5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 CNGB3Q9NQW8 809 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 SPTLC3Q9NUV7 552 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 ZNF212Q9UDV6 495 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 PLA2G2DQ9UNK4 145 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 PTRH2Q9Y3E5 179 aaKnown RBP5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 PCYT1BQ9Y5K3 369 aaPredicted RBP5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 EPN1Q9Y6I3 576 aaPredicted RBP5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 HECTD4Q9Y4D8 3996 aa5.03□□□□□ -1.6
SBDSP1-204ENST00000453858 SCN2AQ99250 2005 aa5.03□□□□□ -1.6
SBDSP1-204ENST00000453858 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.03□□□□□ -1.6
SBDSP1-204ENST00000453858 SH3D21A4FU49 640 aa5.03□□□□□ -1.6
SBDSP1-204ENST00000453858 ASPDHA6ND91 283 aa5.03□□□□□ -1.6
SBDSP1-204ENST00000453858 NPIPA5E9PKD4 350 aa5.03□□□□□ -1.6
SBDSP1-204ENST00000453858 KIAA0391O15091 583 aaKnown RBP5.03□□□□□ -1.6
SBDSP1-204ENST00000453858 TEX33O43247 280 aa5.03□□□□□ -1.6
SBDSP1-204ENST00000453858 LCA5LO95447 670 aa5.03□□□□□ -1.6
SBDSP1-204ENST00000453858 IGHDP01880 384 aa5.03□□□□□ -1.6
SBDSP1-204ENST00000453858 MMEP08473 750 aa5.03□□□□□ -1.6
SBDSP1-204ENST00000453858 ABOP16442 354 aa5.03□□□□□ -1.6
SBDSP1-204ENST00000453858 RPL13P26373 211 aaKnown RBP5.03□□□□□ -1.6
SBDSP1-204ENST00000453858 GJB2P29033 226 aa5.03□□□□□ -1.6
SBDSP1-204ENST00000453858 MMP12P39900 470 aa5.03□□□□□ -1.6
SBDSP1-204ENST00000453858 LIMS1P48059 325 aa5.03□□□□□ -1.6
SBDSP1-204ENST00000453858 LINC00310P59036 64 aa5.03□□□□□ -1.6
SBDSP1-204ENST00000453858 NUCB2P80303 420 aa5.03□□□□□ -1.6
SBDSP1-204ENST00000453858 ALDH6A1Q02252 535 aaKnown RBP5.03□□□□□ -1.6
SBDSP1-204ENST00000453858 ROM1Q03395 351 aa5.03□□□□□ -1.6
SBDSP1-204ENST00000453858 CYP24A1Q07973 514 aa5.03□□□□□ -1.6
SBDSP1-204ENST00000453858 ADIGQ0VDE8 80 aa5.03□□□□□ -1.6
SBDSP1-204ENST00000453858 PMPCAQ10713 525 aa5.03□□□□□ -1.6
SBDSP1-204ENST00000453858 TERF2Q15554 542 aa5.03□□□□□ -1.6
SBDSP1-204ENST00000453858 ALFQ53S48 1182 aa5.03□□□□□ -1.6
SBDSP1-204ENST00000453858 TTC38Q5R3I4 469 aa5.03□□□□□ -1.6
SBDSP1-204ENST00000453858 AGAP9Q5VTM2 703 aa5.03□□□□□ -1.6
SBDSP1-204ENST00000453858 ARHGAP17Q68EM7 881 aa5.03□□□□□ -1.6
SBDSP1-204ENST00000453858 LIPIQ6XZB0 460 aa5.03□□□□□ -1.6
SBDSP1-204ENST00000453858 SLC9B2Q86UD5 537 aa5.03□□□□□ -1.6
SBDSP1-204ENST00000453858 EID3Q8N140 333 aa5.03□□□□□ -1.6
SBDSP1-204ENST00000453858 FAM57AQ8TBR7 257 aa5.03□□□□□ -1.6
SBDSP1-204ENST00000453858 CPT1BQ92523 772 aa5.03□□□□□ -1.6
SBDSP1-204ENST00000453858 RSC1A1Q92681 617 aa5.03□□□□□ -1.6
SBDSP1-204ENST00000453858 DACT3Q96B18 629 aaPredicted RBP5.03□□□□□ -1.6
SBDSP1-204ENST00000453858 ZDHHC12Q96GR4 267 aa5.03□□□□□ -1.6
SBDSP1-204ENST00000453858 THOC3Q96J01 351 aaKnown RBP5.03□□□□□ -1.6
SBDSP1-204ENST00000453858 SIGLEC12Q96PQ1 595 aa5.03□□□□□ -1.6
SBDSP1-204ENST00000453858 KRTAP4-9Q9BYQ8 210 aa5.03□□□□□ -1.6
SBDSP1-204ENST00000453858 TM6SF2Q9BZW4 377 aa5.03□□□□□ -1.6
SBDSP1-204ENST00000453858 NTMQ9P121 344 aa5.03□□□□□ -1.6
SBDSP1-204ENST00000453858 NPIPA1Q9UND3 350 aa5.03□□□□□ -1.6
SBDSP1-204ENST00000453858 EXOC7Q9UPT5 735 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms